mRNA_E-siliculosus-1a_M_contig8.16203.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: D7FNX5_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX5_ECTSI) HSP 1 Score: 748 bits (1930), Expect = 3.720e-262 Identity = 393/425 (92.47%), Postives = 399/425 (93.88%), Query Frame = 1
Query: 610 MAMARALGRVLRGNRRTGLNSGATPQHKDNTSRAADGRGGGLLRRWRARQRQGRGRRHPDPADGHLAAATDEVEKRTKVETGGGAGKHRASIRESGGEVQANGDPAAASTAAAXXXXAVAGDGGSGIRSANSSVVVNEGICVGVDGSGAALRPGKYDGEDVSPEAWTKVGELRARAERSDPNAGEEEKGLHTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLKRAAXXXXXXRVEAVLSEEQWSRHKELQAEIFWVGRQGEAVEEGWDKDGRPTMVLRSIAHNPGAIDLEEFQRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRVLLLSSNWQDRLLEDFDASVLPPHLGGTMVDYPPPQPPEM 1884
MAMARALGRVLRGNRR+ LNSGATPQHK NTSRAADG GGLLRRWRARQ QGRGRRHPDPADGHLAAATDEV K+TK E GGGAGKHRASIRESGGEVQANGDPAAASTA XXXXAV GDGGSG+RSANSS VVNEGICVGVDGSG ALRPGKYDGEDVSPEAWTKVGELRARAERSDPNAGEEEKGLHTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLKRAAXXXXXX VEAVLSE+QWSRHKELQAEIFWVGR DKDGRPTMVLRSIAHNPGAID EEFQRYFLFLLEQGRQLWGLG VQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWII +RLVDNRQRKRVLLLSSNWQDRLLEDFDASVLPPHLGGTMVDYPPPQPP+M
Sbjct: 1 MAMARALGRVLRGNRRSRLNSGATPQHKKNTSRAADGGVGGLLRRWRARQGQGRGRRHPDPADGHLAAATDEVGKKTKAEAGGGAGKHRASIRESGGEVQANGDPAAASTAXXXXXXAVTGDGGSGVRSANSSFVVNEGICVGVDGSGPALRPGKYDGEDVSPEAWTKVGELRARAERSDPNAGEEEKGLHTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLKRAAXXXXXXXVEAVLSEQQWSRHKELQAEIFWVGR---------DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAARLVDNRQRKRVLLLSSNWQDRLLEDFDASVLPPHLGGTMVDYPPPQPPKM 416
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: A0A835Z1B7_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B7_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.520e-46 Identity = 90/208 (43.27%), Postives = 133/208 (63.94%), Query Frame = 1
Query: 1156 AGEEEKGL---HTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLKRAAXXXXXXRVEAVLSE-EQWSRHKELQAEIFWVGRQGEAVEEGWDKDGRPTMVLRSIAHNPGAIDLEEFQRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRV 1767
AG E +G+ WL EGR L+D ++LRF F HG ++A W QL+ +A +V+A+L E E+W E + E+FW+G D +G PT+ LR + H+PG +D +F RY ++L+E+GR+ WG+G+ Q N++VDRV +G+ NQDP LL+ MLP+FRD YP+I+ R Y+AP++W+F +W + LVD RQR RV
Sbjct: 307 AGGEGEGITPMSPWLT----EGR--LSDFEILRFFRFNHGRLEATWAQLQTSAAWRHAYKVDAILGESEEWESFAEAKRELFWMGN---------DSEGLPTLCLRGVHHHPGVLDPSKFMRYLVYLVEKGRREWGVGSHYQANMVVDRVDSGLHNQDPELLKVMLPIFRDNYPEIIHRAYIAPSNWVFMLIWAVARVLVDARQRARV 499
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: A0A7S4ULM1_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4ULM1_GUITH) HSP 1 Score: 144 bits (362), Expect = 1.150e-32 Identity = 84/229 (36.68%), Postives = 128/229 (55.90%), Query Frame = 1
Query: 1162 EEEKGLHTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLKRAAXXXXXXRVEAVLSEEQWSRHKELQAEIFWVGRQGEAVEEGWDKDGRPTMVLRSIAHNPGAIDLEEFQRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRVLLLSSN-WQDRLLEDFDASVLPPHLGG 1845
E++ L W+A G+ + D+LRF+ H VDAAW +KR + +++++L E+ E + E F+ G DK GRP +V R+ +H PG I+ + + RY + +EQGR+ +GLG Q ++VDR+G+G+KNQDP LL+ +LP F +P IV Y+AP + +F FVW + S L+D + V LL + LL+ D VLP +LGG
Sbjct: 269 EDKVTLGPWIA--------GIENNDILRFLR-AHPSVDAAWAAIKRTSKWRKEEKIDSILEEDLSYVMAEGKEEFFYTGV---------DKAGRPILVYRAASHVPGKINEKLYCRYVVQRVEQGRKKYGLGKNVQACVVVDRIGSGLKNQDPALLRELLPCFTTHFPGIVGNIYIAPVNNVFFFVWSLLSLLLDEDTKNSVKLLGKEEYNSELLKVMDRGVLPKNLGG 479
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: A0A7S0F3A4_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F3A4_9CRYP) HSP 1 Score: 145 bits (366), Expect = 4.390e-32 Identity = 89/238 (37.39%), Postives = 132/238 (55.46%), Query Frame = 1
Query: 1135 AERSDPNAGEEEKGLHTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLKRAAXXXXXXRVEAVLSEEQWSRHKELQAEIFWVGRQGEAVEEGWDKDGRPTMVLRSIAHNPGAIDLEEFQRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRVLLLS-SNWQDRLLEDFDASVLPPHLGG 1845
AE SD +E++ L W+A G+ + D+LRF+ H VD AW +KR + +++++L E+ E + E F+ G DK GRP +V R+ H PG ID + + RY + +EQGR+ +GLG Q ++VDR+G+G+KNQDP LL+ +LP F +P IV Y+AP + +F FVW + S L+D + V LL S + LL D+ VLP +LGG
Sbjct: 522 AELSD----KEKEELGPWIA--------GIENNDILRFLR-AHPSVDGAWAAIKRTSKWRNDEKIDSILEEDLSYVMPEGKEEFFYTGV---------DKAGRPILVYRAATHVPGKIDEKLYCRYVVQRVEQGRKKYGLGKNVQACVVVDRIGSGLKNQDPALLRELLPCFTTHFPGIVGNIYIAPVNNVFFFVWSLLSLLLDEDTKNSVKLLGKSEFTSELLGVMDSEVLPKNLGG 737
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: A0A7S4PA60_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA60_GUITH) HSP 1 Score: 144 bits (362), Expect = 1.390e-31 Identity = 84/229 (36.68%), Postives = 128/229 (55.90%), Query Frame = 1
Query: 1162 EEEKGLHTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLKRAAXXXXXXRVEAVLSEEQWSRHKELQAEIFWVGRQGEAVEEGWDKDGRPTMVLRSIAHNPGAIDLEEFQRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRVLLLSSN-WQDRLLEDFDASVLPPHLGG 1845
E++ L W+A G+ + D+LRF+ H VDAAW +KR + +++++L E+ E + E F+ G DK GRP +V R+ +H PG I+ + + RY + +EQGR+ +GLG Q ++VDR+G+G+KNQDP LL+ +LP F +P IV Y+AP + +F FVW + S L+D + V LL + LL+ D VLP +LGG
Sbjct: 532 EDKVTLGPWIA--------GIENNDILRFLR-AHPSVDAAWAAIKRTSKWRKEEKIDSILEEDLSYVMAEGKEEFFYTGV---------DKAGRPILVYRAASHVPGKINEKLYCRYVVQRVEQGRKKYGLGKNVQACVVVDRIGSGLKNQDPALLRELLPCFTTHFPGIVGNIYIAPVNNVFFFVWSLLSLLLDEDTKNSVKLLGKEEYNSELLKVMDRGVLPKNLGG 742
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: A0A7S0LX31_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LX31_9CRYP) HSP 1 Score: 137 bits (345), Expect = 1.210e-30 Identity = 86/252 (34.13%), Postives = 130/252 (51.59%), Query Frame = 1
Query: 1075 YDGEDVSPEAWTKVGELRARAERSDPNAGEEEKGLHTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLKRAAXXXXXXRVEAVLSEEQWSRHKELQAEIFWVGRQGEAVEEGWDKDGRPTMVLRSIAHNPGAIDLEEFQRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRVLLLSSNWQDRLLEDFDASVLP 1830
Y G +P+ + + ++RA+ N + WL L D+D+LR++M+ H D AW +L+ A +E VL+E ++F G++ E + DK GRP ++ RS H PG ID + F RY + E+ R + LGT Q +IVDR+G+G+KNQDP LL+ +LPV + YP+ V YVAP S +F +W I L+D+ R+R LL ++ LLE + LP
Sbjct: 233 YGGRVATPQQLSDIADIRAKIAELATNG---DGACTPWLRR--------LEDVDILRYLMW-HKDAGIAWEKLQATAKWREAEGIEGVLAENL--------DDVFEAGKE-EMLYLPPDKLGRPVLLYRSALHKPGKIDPQRFTRYVIQQTERARLQYRLGTEVQSIVIVDRIGSGLKNQDPALLKVLLPVIVEHYPEYVGFAYVAPISVVFNVIWKIIQLLLDDAARQRFFLLQGDYTGALLEFMERRELP 463
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: A0A4D9D201_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D201_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.180e-26 Identity = 84/270 (31.11%), Postives = 137/270 (50.74%), Query Frame = 1
Query: 1072 KYDGEDVSPEAWTKVGELRARAERSDPNAGEEEKGLHTWLATGGGEGRTGLTDMDLLRFVM-FRHGDVDAAWRQLKRAAXXXXXXRVEAVLSEEQWSRHKE--LQAEIFWVGRQGEAVEEGWDKDGRPTMVLRSIAHNPGAIDLEEFQRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRVLLLSSNWQDR----LLEDFDASVLPPHLGGTMVDY 1860
++ G VS E + +L+AR + L W++ G DLLR+V F+H V+ AW L++ V+ L + + + L E+FW+G D++G P +V R+ H PG EE+ Y L+L+E+GR+L+GLG Q++ +VDR G G+ NQDP ++ +++PV + YP+ + + ++AP + IF+F+W + + ++ RV LLS+ R L E F L HLGGT+ Y
Sbjct: 588 RFGGRGVSDEERAVMEKLQARLVMLPES-------LTHWVSPG-----------DLLRYVRAFKH--VEDAWMALRKTCVFRREKGVDMALRPDLAEKFADSPLADEMFWMGL---------DREGDPVLVFRTALHQPGRFTTEEYLAYLLYLIEKGRELYGLGQRTQISFLVDRKGGGLANQDPKVVLALVPVLQAHYPECLKKTFIAPVNVIFQFIWKVFTLVLAKDTADRVRLLSAGDLARDGGGLREVFYDGQLMKHLGGTLEGY 828
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: K8YSK8_NANGC (Sec14p-like phosphatidylinositol transfer family protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSK8_NANGC) HSP 1 Score: 126 bits (317), Expect = 6.120e-26 Identity = 74/216 (34.26%), Postives = 118/216 (54.63%), Query Frame = 1
Query: 1234 DLLRFVM-FRHGDVDAAWRQLKRAAXXXXXXRVEAVLSEEQWSRH--KELQAEIFWVGRQGEAVEEGWDKDGRPTMVLRSIAHNPGAIDLEEFQRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRVLLLSSNWQDR----LLEDFDASVLPPHLGGTMVDY 1860
DLLR+V F+H V+ AW L++ V+ L + + L E+FW+G D++G P +V R+ H PG EE+ Y L+L+E+GR+L+GLG Q++ +VDR G G+ NQDP ++ +++PV + YP+ + + ++AP + IF+F+W + + ++ RV LLS+ R L E F L HLGGT+ Y
Sbjct: 570 DLLRYVRAFKH--VEDAWVALRKTCVFRRERGVDVALRPDLAEKFAGSPLAEEMFWMGL---------DREGDPVLVFRTALHQPGRFTTEEYLAYLLYLIEKGRELYGLGQRTQISFLVDRKGGGLANQDPKVVLALVPVLQAHYPECLKKTFIAPVNVIFQFIWKVFTLVLAKDTANRVRLLSAGDLARDGGGLREVFYDGQLMKHLGGTLEGY 774
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: A0A7S2F3B8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3B8_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.520e-21 Identity = 49/127 (38.58%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1504 QRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRVLLLSSNWQD----RLLEDFDASVLPPHLGGTMV--DYPP 1866
+ Y+++L+E R WG+G ++VDRVG+G+KN DPLL+ LP + YP+IV R ++ P +W+F +W I L+ R R+R L++ D RL+ + VLP LGG + DYPP
Sbjct: 2 EEYWVYLMEYARNAWGVGECMGFELLVDRVGSGLKNNDPLLVSYALPRAQSHYPEIVERVFIGPINWVFWLIWRICRLLLQERVRQRFELITDPGSDAGRARLVAAYTRDVLPKPLGGDLTGDDYPP 128
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Match: UPI000644B5D3 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B5D3) HSP 1 Score: 81.3 bits (199), Expect = 2.940e-13 Identity = 66/255 (25.88%), Postives = 116/255 (45.49%), Query Frame = 1
Query: 1087 DVSPEAWTKVGELRAR-AERSDPNAGEE-EKGLHTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLKRAAXXXXXXRVEAVLSEEQWSRHKELQAEIFWVGRQGEAVEEGWDKDGRPTMVLRSIAHNPGAIDLEEFQRYFLFLLEQGRQLWGLGTVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIGSRLVDNRQRKRVLLLSSNWQDRLLEDFDASVLPPHLGG 1845
D+SP + E++AR A+ DP+ E EK L D +LRF+ R ++ ++ L+ A + + V + S EL+ G++ G DK+GRP ++R+ H+ DL+E QRY ++++E G++L G ++ +I D KN D L + M+ +F+ YP+ + +C++ W+F +W I +D ++ + S +LLE L GG
Sbjct: 7 DLSPAQENMLSEIKARLAKNQDPSLKLEIEK----------------LDDSMILRFLRARKWKLEDSYNMLQEALSFRASFQDKGVDFITESSVENELKC--------GKSFFHGSDKEGRPICIVRTRKHDSSQRDLDEAQRYIVYVMETGKELLPEG-IETCTLIFDMSSFSTKNMDYPLCKFMVEMFQKYYPESLSKCFILNAPWMFMGIWSIIKHWLDPYTVSKINFVKSK---QLLEYIHPEQLLTSYGG 233 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16203.1 >prot_E-siliculosus-1a_M_contig8.16203.1 ID=prot_E-siliculosus-1a_M_contig8.16203.1|Name=mRNA_E-siliculosus-1a_M_contig8.16203.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=587bp MHTPSNSLLMLDPPHTRCGRRLALFTGALLLPVQQQPLLDGSIGSYLQNGback to top mRNA from alignment at E-siliculosus-1a_M_contig8:1956962..1965052- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16203.1 ID=mRNA_E-siliculosus-1a_M_contig8.16203.1|Name=mRNA_E-siliculosus-1a_M_contig8.16203.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8091bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1956962..1965052- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1956962..1965052- >mRNA_E-siliculosus-1a_M_contig8.16203.1 ID=mRNA_E-siliculosus-1a_M_contig8.16203.1|Name=mRNA_E-siliculosus-1a_M_contig8.16203.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3522bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1956962..1965052- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |