mRNA_E-siliculosus-1a_M_contig8.16197.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: D7FNX7_ECTSI (TatD DNase domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX7_ECTSI) HSP 1 Score: 516 bits (1328), Expect = 3.470e-181 Identity = 263/269 (97.77%), Postives = 266/269 (98.88%), Query Frame = 3
Query: 27 MFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGMHPEKADLHKVDGVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRVFDR 833
MFDCHAHLTDSSLAEGL QTLLEAEAAGVTGIVAVSESLDDATPV+ELCASINDDAS+CRKLRLHPSIGMHPEKADLHKVD VLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLS+SRDWIASLKGVPADVVAETTTANARRLFPR FDR
Sbjct: 1 MFDCHAHLTDSSLAEGLQQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADLHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSISRDWIASLKGVPADVVAETTTANARRLFPRAFDR 269
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: A0A6H5KIS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS3_9PHAE) HSP 1 Score: 508 bits (1309), Expect = 3.840e-177 Identity = 268/303 (88.45%), Postives = 271/303 (89.44%), Query Frame = 3
Query: 9 AGLPAVMFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGMHPEKADLHKVDGVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPK----------------------------YAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRVFDR 833
AGLPAVMFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPV+ELCASINDDAS+CRKLRLHPSIGMHPEKAD+HKVD VLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPK YAVQAAKAGYFFSVPPIVCRS GFQSLVKALPLESLVLETDSPALGPEKGV NVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPR FDR
Sbjct: 40 AGLPAVMFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHPEKADVHKVDDVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKDNGLITAEIQQTFRVQEYLATAGGEKERYAVQAAKAGYFFSVPPIVCRSSGFQSLVKALPLESLVLETDSPALGPEKGVGNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRAFDR 342
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: UPI0018653474 (tatD DNase domain containing 3-like isoform X1 n=2 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018653474) HSP 1 Score: 229 bits (585), Expect = 7.300e-69 Identity = 125/267 (46.82%), Postives = 169/267 (63.30%), Query Frame = 3
Query: 33 DCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGMHPEK---ADLHKVDGVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRV 824
DCH H++ + + + +++ G+ G+VAV+E + +++L C L +HP G+ PE A L +D L LI+KH D ++ +GEVGLDF+ + G KE QREV RQA AK L L +NVHSRSAG I LL+E+G+ +A+LHAFDGKP A++ KAGY+FS+PP + RS Q LVK LPLES+ LETDSPALGPEK VRN P N++VS ++IA +KGVP + V E TT NA RLFP++
Sbjct: 6 DCHCHISATEFDNDIEDVIEKSKQVGILGLVAVAEHAGEFEKIIQLSERFPGFVFPC--LGVHPVQGVPPEPQRGATLEDLDAALPLIEKHKDRLLAIGEVGLDFTPRFLSSDKG------KEEQREVLIRQAEIAKRLDLPLNVHSRSAGRPTIHLLKEQGVEKALLHAFDGKPSVAIEGVKAGYYFSIPPSIVRSEQKQKLVKQLPLESICLETDSPALGPEKQVRNEPRNITVSAEFIAKVKGVPLEQVIEVTTRNALRLFPKL 264
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: A0A8C4ZJW8_GADMO (TatD DNase domain containing 3 n=3 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZJW8_GADMO) HSP 1 Score: 224 bits (570), Expect = 1.220e-66 Identity = 123/275 (44.73%), Postives = 173/275 (62.91%), Query Frame = 3
Query: 27 MFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGMHPEK---------ADLHKVDGVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRV 824
+ DCH H++ + + + + ++ AG+ GI+AV+E + ++EL SQ + P +G+HP + L +D L LI+K+ + +V +GEVGLDF+ + E G AK++QR+V RQA AK L L +NVHSRSAG I LL+E+G+ +A+LHAFDGKP A++ KAGYFFS+PP + RS Q LVK LPLE++ LETDSPALGPEK VRN P NL VS ++I+ +KG+P + V E TT NA RLFP++
Sbjct: 4 LVDCHCHISSEDFDKDIEEVIAHSKQAGLLGILAVAEHHGEFDKIIEL--------SQRFPGFIFPCLGVHPVQQTVPTVQRCVSLQDLDAALPLIEKYEEHLVAIGEVGLDFTPRFVSEEG------AKDIQRQVLVRQAELAKRLDLPLNVHSRSAGRPTIQLLKEQGVEKALLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSEQ-QKLVKQLPLENICLETDSPALGPEKQVRNEPSNLLVSAEYISKIKGLPLETVLEVTTRNALRLFPKL 263
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: A0A7S2UWP9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP9_9STRA) HSP 1 Score: 223 bits (567), Expect = 4.640e-66 Identity = 126/272 (46.32%), Postives = 174/272 (63.97%), Query Frame = 3
Query: 27 MFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGMHPEKADLHKVDGVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQA-AKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLF--PRVFDR 833
+FDCHAH+TD+ + L L A GV G+V VS + D+ VL+L + + + PS+G+HPE A++ + ++ I ++ D + VGEVGLD+S H++GE GE AE K +QREVF +Q +A EL L +NVHSR+AGHH + LL+E G TR V+HAFDG+ YA +A +++GY+FSVPP + RSP Q LV+ LPL+ L+LE+DSPAL P KG RN P N+ VS + IA +K V VA T ANA +L P F +
Sbjct: 16 VFDCHAHMTDTEFSNDLENVLEMCNATGVQGLVCVSSGVHDSEKVLQLGS---------KHPSVIPSVGLHPEFANISDLPTIITQITQYHDQLASVGEVGLDYSPHILGE--GE-AEERKAIQREVFSQQVLKAVELDLPLNVHSRAAGHHTLDLLRELGATRVVMHAFDGRAHYAERAVSESGYYFSVPPCIVRSPQLQKLVRRLPLDHLLLESDSPALAPVKGERNCPSNIIVSCEEIAKIKQVSVQEVAAITYANAMKLLNIPETFQQ 275
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: A0A553Q0V9_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553Q0V9_9TELE) HSP 1 Score: 222 bits (565), Expect = 6.550e-66 Identity = 121/271 (44.65%), Postives = 169/271 (62.36%), Query Frame = 3
Query: 33 DCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGMHPEK-------ADLHKVDGVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRV 824
DCH H++ + + +++ AG+ ++AV+E + +++L SQ + P +G+HP + A L +D L LIDKH D IV +GEVGLDF+ ++ G K+ QR+V RQA AK+L L +NVHSRSAG I LL++ G+ A+LHAFDGKP A++ KAGYFFS+PP + RS Q LVK +PLES+ LETD+PALGPEK VRNVP N+S+S ++IA +KG+P + V E TT NA LFP++
Sbjct: 6 DCHCHISADDFDSDIGDVIEDSKRAGLVALLAVAEHAGEFEKIIQL--------SQRFPGFIMPCLGVHPVQDPGQPRGASLEDLDAALPLIDKHKDHIVAIGEVGLDFTPRVVNNDAG------KDSQRKVLIRQAEIAKQLNLPLNVHSRSAGRPTIHLLKQLGVENALLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSDQKQKLVKQVPLESMCLETDAPALGPEKQVRNVPKNISISAEYIAKIKGIPLETVMEVTTQNALHLFPKL 262
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: A0A3B4DIS2_PYGNA (Putative deoxyribonuclease TATDN3 n=8 Tax=Characoidei TaxID=1489739 RepID=A0A3B4DIS2_PYGNA) HSP 1 Score: 221 bits (563), Expect = 1.340e-65 Identity = 123/267 (46.07%), Postives = 168/267 (62.92%), Query Frame = 3
Query: 33 DCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGM---HPEKADLHKVDGVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRV 824
DCH H++ + + +++A+ AGV ++AV+E + +++L C L +HP G HP A L +D L LI+K+ + IV +GEVGLDF+ ++ G KE QR+V RQA AK+L L +NVHSRSAG I LL+E G+ A+LHAFDGKP A++ +AGYFFS+PP + RS Q LVK LPLE++ LETDSPALGPEK VRN P N++VS ++IA KG+P + V E TT NA RLFP++
Sbjct: 6 DCHCHISAGEFDDDIDDVIVQAKKAGVLALLAVAEHAGEFEKIIQLSQRFPGFVMPC--LGVHPVQGQDPAHPRGALLEDLDAALPLIEKYKEHIVAIGEVGLDFTPRVVDNDAG------KESQRQVLIRQAEIAKQLSLPLNVHSRSAGRPMIHLLKELGVKNALLHAFDGKPSVAMEGVRAGYFFSIPPSIVRSEQ-QKLVKQLPLENMCLETDSPALGPEKQVRNEPRNITVSAEYIAKTKGIPLEKVMEVTTLNALRLFPKL 263
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: A0A3B3VNF6_9TELE (TatD DNase domain containing 3 n=3 Tax=Ovalentaria TaxID=1489908 RepID=A0A3B3VNF6_9TELE) HSP 1 Score: 221 bits (562), Expect = 1.950e-65 Identity = 125/268 (46.64%), Postives = 172/268 (64.18%), Query Frame = 3
Query: 33 DCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGMHPEK---ADLHKVDGVLELIDKHADTIVCVGEVGLDFS-RHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRV 824
DCH H++ + + + + ++ AG+ ++AV+E + T ++EL C L +HP + PE+ A L +D L +I+K+ D +V VGEVGLDF+ R + GES KE Q+ V RQA+ AKEL L +NVHSRSAG I LL+E+G+ +A+LHAFDGKP A++ KAGYFFS+PP + RS Q LVK LPLE++ LETDSPALGPEK VRN P N+ VS ++I+ +KGV + V E TT NA RLFP++
Sbjct: 6 DCHCHISARDFDKDVEEVIENSKKAGLLALLAVAEHAGEFTKIIELSQRFPGFIFPC--LGVHPVQEVSPEQQRSASLQDLDAALPIIEKYKDQLVAVGEVGLDFTPRFVSGES-------EKETQKLVLIRQAQVAKELDLPLNVHSRSAGRPTIHLLKEQGVEKALLHAFDGKPSVAMEGVKAGYFFSIPPSITRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPRNICVSAEYISKVKGVSLETVMEVTTQNALRLFPKL 264
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: UPI001EEA432E (tatD DNase domain containing 3-like isoform X1 n=3 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEA432E) HSP 1 Score: 221 bits (564), Expect = 1.990e-65 Identity = 123/280 (43.93%), Postives = 172/280 (61.43%), Query Frame = 3
Query: 9 AGLPAVMFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGMHPEKAD--------LHKVDGVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRV 824
AG DCH H++ + + + +++ AGV +VAV+E + +++L SQ + P +G+HP + D L +D L LI+K+ + IV +GEVGLDF+ ++ G KE+QR+V RQ AK+L L +NVHSRSAG I LL+E G+ A+LHAFDGKP A++ +AGYFFS+PP + RS Q LVK LPLE++ LETDSPALGPEK VRN P N+++S ++IA +KGVP + V E TT NA RLFP++
Sbjct: 21 AGFMQGYIDCHCHISSRDFDDDIDSVIEQSKKAGVQALVAVAEHAGEFEKIIQL--------SQRFPGFIIPCLGVHPVQEDPAQSRGALLEDLDSALPLIEKYKEHIVAIGEVGLDFTPRIVSTDAG------KELQRQVLIRQVEIAKQLNLPLNVHSRSAGRPTIHLLKELGVENALLHAFDGKPSVAMEGVRAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNITISAEYIAKIKGVPVEKVIEVTTLNALRLFPKL 286
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Match: A0A4W6FQA4_LATCA (TatD DNase domain containing 3 n=46 Tax=Percomorphaceae TaxID=1489872 RepID=A0A4W6FQA4_LATCA) HSP 1 Score: 220 bits (561), Expect = 2.750e-65 Identity = 120/267 (44.94%), Postives = 169/267 (63.30%), Query Frame = 3
Query: 33 DCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCASINDDASQCRKLRLHPSIGMHPEK---ADLHKVDGVLELIDKHADTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGITRAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFPRV 824
DCH H++ + + + + ++ AG++ ++AV+E + ++ L C L +HP + PE+ A L +D L +I+K+ D +V +GEVGLDF+ + KE QR+V RQA+ AKEL L +NVHSRSAG I LL+E+G+ RA+LHAFDGKP A++ KAGYFFS+PP + RS Q LVK LPLE++ LETDSPALGPEK VRN P N+S+S ++I+ +KGV + V E TT NA RLFP++
Sbjct: 6 DCHCHISAGDFDKDIEEVIENSKKAGLSALLAVAEHAGEFDKIISLSQRFPGFIFPC--LGVHPVQSVSPEQQRGASLQDLDAALPIIEKYKDHLVAIGEVGLDFTPRFVSNDTD------KESQRQVLIRQAQIAKELDLPLNVHSRSAGRPTIHLLKEQGVERALLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSEQKQKLVKQLPLENICLETDSPALGPEKQVRNEPKNISISAEYISKIKGVSLEEVMEVTTQNALRLFPKL 264 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16197.1 >prot_E-siliculosus-1a_M_contig8.16197.1 ID=prot_E-siliculosus-1a_M_contig8.16197.1|Name=mRNA_E-siliculosus-1a_M_contig8.16197.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=270bp MFDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVLELCAback to top mRNA from alignment at E-siliculosus-1a_M_contig8:1908320..1912470- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16197.1 ID=mRNA_E-siliculosus-1a_M_contig8.16197.1|Name=mRNA_E-siliculosus-1a_M_contig8.16197.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4151bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1908320..1912470- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1908320..1912470- >mRNA_E-siliculosus-1a_M_contig8.16197.1 ID=mRNA_E-siliculosus-1a_M_contig8.16197.1|Name=mRNA_E-siliculosus-1a_M_contig8.16197.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1620bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1908320..1912470- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |