mRNA_E-siliculosus-1a_M_contig8.16178.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: A0A6H5KGY0_9PHAE (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGY0_9PHAE) HSP 1 Score: 588 bits (1515), Expect = 1.030e-209 Identity = 307/322 (95.34%), Postives = 312/322 (96.89%), Query Frame = 1
Query: 49 MRGFRTMVALNNVLHVGAFLLPISSVLRGNMAPKSTFLPSPAGTPDPAALRRRLTLSAGSDDEGIVASPAALPPSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDVDVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSFRASREDLSLGDDRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYEHVQTMLAEGKLDCIKEAALPLQKNTAGGLTEKD 1014
MRGFR MVALNNVLHVGAFL PISSVLRGN APKST+LPSPAGTPDPAALRRRLTLSAGS+DEGI+ASPA LP SGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDD DVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGR+VDGSFRASREDLSLGD RPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGY+HVQTMLAEGKLDCIKEAALPLQ NT GGLT KD
Sbjct: 1 MRGFRAMVALNNVLHVGAFLWPISSVLRGNTAPKSTYLPSPAGTPDPAALRRRLTLSAGSNDEGIIASPAVLPSSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRFVDGSFRASREDLSLGDGRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYDHVQTMLAEGKLDCIKEAALPLQMNTTGGLTGKD 322
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: A0A7S0MNQ6_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MNQ6_9CRYP) HSP 1 Score: 183 bits (465), Expect = 2.840e-51 Identity = 100/233 (42.92%), Postives = 125/233 (53.65%), Query Frame = 1
Query: 268 PSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDVDVICRDRVHLLVIGIWPR--PFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSF----RASREDLSLGDDRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYEHVQTMLAEGKL 948
P P++ FPGGGI+FWWQAG + ALQE Y L LD GASAG+L A A L D N +W RP GL G+WG M+ WL ELLPDD C RV + V + P P RR +V DF +K D+I AC+ASVHIP+F+D +ARHRG R VDGS R + GD + + D +A R FL + EG + +RGY+H A L
Sbjct: 61 PERPPLIVFPGGGIYFWWQAGAVKALQEMYTLDDLDMTGASAGALCAVLAGCNVDMDRAFELASRLADENGVWERPQGLMGIWGGMIRQWLHELLPDDAARRCSGRVAISVTALSPAVPPLRRLSVDDFETKGDVIDACLASVHIPFFLDGKATARHRGARCVDGSLTFALRRTPWLFKPGDRQAALVVHQSHDAGLAGDRPGFLETLSLEGFRELYRRGYDHTHAAHAAAAL 293
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: A0A388K383_CHABU (Patatin n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K383_CHABU) HSP 1 Score: 187 bits (474), Expect = 1.300e-49 Identity = 107/240 (44.58%), Postives = 138/240 (57.50%), Query Frame = 1
Query: 277 KPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDVDVICRDRVHLLVIGI-----WPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSFRASREDLSLGDDRPTVYFDYDEDEVMAARRGKFLSLTNQ-EG-------LLFMRQRGYEHVQTMLAEGKLDCI 957
+P+LSF GGGIFF+WQ G AL ++L D GASAG+LAA A L N +W RP GL G+WG M+ WLDELLP + +C R+H+ V+ + F RR V F SK DLI ACMASVHIP+F+D AR R VDGSF AS+ +S DRPTV+ DY +DE +A++R +FLSL Q EG LL M +G HV+ +L++ KL +
Sbjct: 380 RPLLSFQGGGIFFYWQLGAARALSRHFDLDKADMAGASAGALAATLAACEVDAEEATKLAFQLSLDNRVWDRPTGLGGIWGPMIRSWLDELLPPNAAQLCDGRLHIYVLELPSLRRRSPAFVRRGVCQFHSKRDLIDACMASVHIPFFIDGGACARFRDRWCVDGSFLASKHSISPYPDRPTVWVDYMDDEDLASQRLRFLSLGAQGEGPQRTWQWLLTMISKGEAHVEKLLSDHKLAAL 619
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: K0TQT9_THAOC (PNPLA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQT9_THAOC) HSP 1 Score: 175 bits (443), Expect = 1.940e-48 Identity = 95/231 (41.13%), Postives = 139/231 (60.17%), Query Frame = 1
Query: 280 PVLSFPGGGIFFWWQAGVISALQER-YNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDVDVICRDR-VHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSFRASRED-LSLGD-DRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYEHVQTMLAEGKLDCIK 960
P + FPGGG+FF+WQAGV++ LQE Y+LS+ GASAG+L+A AL + N +W RP+GL G+WG+++EDWLD LLPDD + D +H+LV + F + VS+F +SDLI+A MASVH+PWF+D + + RG +DGSF AS D LS D DR + D+ D VM + G+F+ + + + + + RG E+ + M G+ C++
Sbjct: 39 PAIVFPGGGLFFYWQAGVVTHLQEAGYDLSAATMSGASAGALSATLAKTGVSPIDATELALHMSKENGVWERPMGLQGIWGSIIEDWLDRLLPDDAALRVDDGCLHILVTPV--PSFGKSRVSNFEDRSDLIRANMASVHLPWFLDSNLTTHFRGRACIDGSFLASPSDYLSDRDQDRQRLVLDFKRDPVMKDKAGEFIKVVSPQAIWDILDRGKEYARIMERSGEFACLE 267
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: A0A7S0MR98_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MR98_9CRYP) HSP 1 Score: 173 bits (438), Expect = 1.900e-47 Identity = 91/230 (39.57%), Postives = 127/230 (55.22%), Query Frame = 1
Query: 250 SPAALPPSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDVDVICRDRVHLLVIGIWPR--PFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSF----RASREDLSLGDDRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYEHV 921
SP++ P++ FPGGGI+FWWQAG + ALQERY++ GASAG+L A A L N +W R GL G+WG+++ +WLD +LP++ +CR RV + V + P +RR+V DF +K DL++AC+ASVHIP+F+D + HRG VDGS R + P + D+ DE + ARR FL +Q+ M Q GY HV
Sbjct: 33 SPSSQITDQPPLIVFPGGGIYFWWQAGAVKALQERYDIDKCSLTGASAGALIAVLAGCKIDMDYALQVAERLAVQNGVWGRACGLMGIWGSIIYEWLDIILPENAAELCRGRVSVSVTSVHSSFPPLKRRSVGDFGTKRDLMQACLASVHIPFFLDGRLFSGHRGAACVDGSLTFVLRGKPWHFRPDEPEPALLVDHRTDEALMARRWGFLQTISQDAFRHMYQLGYAHV 262
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: L1IQE7_GUITC (PNPLA domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IQE7_GUITC) HSP 1 Score: 171 bits (433), Expect = 4.120e-47 Identity = 89/238 (37.39%), Postives = 133/238 (55.88%), Query Frame = 1
Query: 265 PPSGKPVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDVDVICRDRVHLLVIGIWP-----RPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSF----RASREDLSLGDDRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYEHVQTMLAEGKLD 951
P +P++ FPGGGI+FWWQAGV+ LQ+R N+ S DF GASAGSL+A A L + +WTR GLAG+WG M+ WLDELLP++ IC DRV ++ + + P +R++++ F +K DLI+ACMASVH+P F+D S G VDGS R D +P++ + +D+ + AR+ FL + + M + G ++ + M+ + L+
Sbjct: 12 PSDSRPLIVFPGGGIYFWWQAGVVQGLQKRINVDSFDFTGASAGSLSAVFAACGVDMMQAFHLAQKLAEEKNVWTRKEGLAGIWGDMIYQWLDELLPENAAEICTDRVDMVAVSVTSVRLSFLPLKRKSITRFKTKKDLIEACMASVHVPMFLDGKMSRSLDGDICVDGSITFVLRNKPWHFKPQDRKPSLMIHHQDDKELMARKWNFLETISLDQFEEMFEMGQKYAEEMIDKKTLE 249
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: A0A7S4C0Y1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0Y1_CHRCT) HSP 1 Score: 170 bits (430), Expect = 2.180e-46 Identity = 105/243 (43.21%), Postives = 141/243 (58.02%), Query Frame = 1
Query: 280 PVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPL-GLAGVWGAMVEDWLDELLPDDVDVICRDRVHLLVIGIWPRP----FRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSFR----ASREDLSLGDDRPTVYFDYDEDEVMA---ARRGKFLSLTNQEGLLFMRQRGYEHVQTMLAEGKLDCIKEAAL 972
P L+FPGGGIFFWWQAG ++AL ER++L+ + VGASAG+LAA A DL D + ++ R GL GVWG MV +WLDELLP D DV+CR RVH+LV + PR F +SD+ S++DLI +AS H+P F+D ++AR RG R VDGS +S + L P V D D M +RR FL L +++G+ M + G +HV M +G L+ + AL
Sbjct: 38 PGLAFPGGGIFFWWQAGAVAALNERFDLARVPCVGASAGALAATIAATKVDPHRALDIAADLADRHGVYDRGAWGLYGVWGPMVREWLDELLPKDADVMCRGRVHILVKRV-PRLRHPYFEPVMLSDYRSRADLIDVNLASAHVPLFLDGRWTARLRGMRCVDGSLSLRPDSSLRRVVLPGRAPVVRIDSSGDLRMRERYSRREDFLRLASRDGVEEMLEWGVKHVAQMERDGALELLAPYAL 279
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: A0A7S2IAY4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAY4_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.290e-46 Identity = 98/232 (42.24%), Postives = 131/232 (56.47%), Query Frame = 1
Query: 292 FPGGGIFFWWQAGVISALQER-YNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDVDVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSFRASRED---------LSLGDDRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYEHVQTMLAEGKLDCI 957
FPGGGIFF+WQAG S L+E Y+LSS+ GASAG+L A AL L + +W RPLGL GVWG M+E WL++LLP++ + DR+ LLV I FR +S F SK DL+K MASVH+PWF+D ++ R +VDGSFRA D LS DD + D+ D +M + F++LT++EG+ + +RG H + M G D I
Sbjct: 94 FPGGGIFFYWQAGAASYLREAGYDLSSVRMSGASAGALVATLTLTDVDFDEATRLALSLAEEAGVWERPLGLQGVWGPMIETWLNDLLPENAVEMVDDRLSLLVTAI--PSFRTDRISSFNSKEDLVKCNMASVHLPWFLDGKLTSNFRDAPHVDGSFRAKPNDYFPELNGQELSEDDDS-LIILDWKADPIMKGKAKDFVTLTSKEGIWGLVERGRSHAKIMDKRGAFDGI 322
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: A0A6U3R5T6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3R5T6_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.150e-45 Identity = 95/231 (41.13%), Postives = 131/231 (56.71%), Query Frame = 1
Query: 292 FPGGGIFFWWQAGVISALQER-YNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDVDVICRDRVHLLVIGIWPRPFRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSFRASRED----LSLGD-DRPTVYFDYDEDEVMAARRGKFLSLTNQEGLLFMRQRGYEHVQTMLAEGKLDCIKEA 966
FPGGGIFF+WQAG S L+E Y+LS + GASAG+LAA AL L + +W RPLGL GVWG M+E WL++LLPD+ + +R+ LLV I FR +S F SK DL++ MASVH+PWF+D ++ R +DGSFRA ED + G D + D+ D VM + F+ LT++EG+ + ++G + Q M G D I ++
Sbjct: 86 FPGGGIFFYWQAGAASYLREAGYDLSDVTMSGASAGALAATLTLADVDFEEATSLALKLAEDAGVWDRPLGLQGVWGPMIETWLNDLLPDNAVEMVDERLSLLVTSI--PSFRTDRISSFESKEDLVRCNMASVHLPWFLDGKLTSNFRQAPRIDGSFRAKTEDYFPQVKNGQVDDSLIILDWKSDPVMEGKTKDFIKLTSKEGIWDLLEQGRSYAQIMDKRGDFDTISQS 314
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Match: A0A7S4JAL6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAL6_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.630e-43 Identity = 98/262 (37.40%), Postives = 143/262 (54.58%), Query Frame = 1
Query: 187 PAALRRRLTLSAGSDDEGIVASPAALPPSGKPVLSFPGGGIFFWWQAGVISALQER-YNLSSLDFVGASAGSLAAXXXXXXXXXXXXXXXALDLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDVDVICRDRVHLLVIGIWPRP-FRRRAVSDFTSKSDLIKACMASVHIPWFMDKHFSARHRGGRYVDGSFRASREDLSLGDDRP--TVYFDYDEDEVMAARR-GKFLSLTNQEGLLFMRQRGYEHVQTMLAEGKLDCI 957
P+A RRL ++ S E S P L FPGGGIFF+WQAG ++ L+E Y+LSS+ GASAG+L A AL +W RPLGL GVWG+++E WLD+LLP D D L ++ + P P F + V+DF +SDLI+A MAS+HIPWF+D + R+R ++DGSF + D + + RP V D+ +D M+ ++ G F+ ++EG+ + +RG + M G + +
Sbjct: 64 PSAEERRLQMATSSASESSSTSEGKR--ERAPQLIFPGGGIFFYWQAGAVTHLRESGYDLSSVSMSGASAGALTATLAATGVDFLDATDLALQFAQEAGVWDRPLGLQGVWGSLIERWLDDLLPPDAHATANDGPGLQLL-VTPVPSFGKTKVTDFRDRSDLIRANMASIHIPWFLDGKLTTRYRDAEHIDGSFLSKATDY-VTEVRPKNVVRLDWTKDPAMSDKKLGDFVEALSKEGIWDLVERGKSYAALMEERGDFESL 321 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16178.1 >prot_E-siliculosus-1a_M_contig8.16178.1 ID=prot_E-siliculosus-1a_M_contig8.16178.1|Name=mRNA_E-siliculosus-1a_M_contig8.16178.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=323bp MRGFRTMVALNNVLHVGAFLLPISSVLRGNMAPKSTFLPSPAGTPDPAALback to top mRNA from alignment at E-siliculosus-1a_M_contig8:1674070..1677705- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16178.1 ID=mRNA_E-siliculosus-1a_M_contig8.16178.1|Name=mRNA_E-siliculosus-1a_M_contig8.16178.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3636bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1674070..1677705- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1674070..1677705- >mRNA_E-siliculosus-1a_M_contig8.16178.1 ID=mRNA_E-siliculosus-1a_M_contig8.16178.1|Name=mRNA_E-siliculosus-1a_M_contig8.16178.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1938bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1674070..1677705- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |