mRNA_E-siliculosus-1a_M_contig8.16154.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5L193_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L193_9PHAE) HSP 1 Score: 434 bits (1115), Expect = 1.800e-144 Identity = 228/298 (76.51%), Postives = 239/298 (80.20%), Query Frame = 1
Query: 1 RKKPCRREESGWFTNNSGLECSMCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEGELPLPLVRGFRPSNDCICQRRDCFYGFLLEWEAKPALRTCSVCKRGYPVKDQKRWYSVDVVDDNIPEGGGSGRTQAWYCQACNQARIRPSGRQLKKRLRHRATR--------ADLKPMNRRRKSLSPGCARW*LKP*VAGTSFTGRMFSTGSQLSAQRMVTKNLSVEAGGRPCARCSRASRALMEANRGWSAARGALETGANDYCVSSRLTLGTRLSHPSSYAHA 870
RKKPCRR E GWFTNN GLECSMCPSGVVHAVSDKLCSACHRSEG AGFTHL+GPRLERATR FLAEYQEGEGELPLPLVRGF PSNDCI QRRDCFYGFLLE EAKP LRTCSVCKRGYPVKDQKRWYSVDVVDDNI EGGGSGRTQAWYCQACNQARIR G +K++ + A KP +R R +L+ +K AGTSF GRM STGSQLSAQRMVTK SV AGGRPCARCSRASRALM RGWSAAR ALETGANDYCV S TLGTR PS+ A+A
Sbjct: 85 RKKPCRRAECGWFTNNPGLECSMCPSGVVHAVSDKLCSACHRSEGLAGFTHLRGPRLERATRFFLAEYQEGEGELPLPLVRGFCPSNDCISQRRDCFYGFLLEREAKPELRTCSVCKRGYPVKDQKRWYSVDVVDDNITEGGGSGRTQAWYCQACNQARIRAIGEATQKKVAASSNSGRPNADEPAPEKPFSRVR-ALA-------IKAVAAGTSFAGRMCSTGSQLSAQRMVTK--SVGAGGRPCARCSRASRALMGVKRGWSAARWALETGANDYCVYSWSTLGTRFDGPSTPANA 372
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5K178_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K178_9PHAE) HSP 1 Score: 333 bits (853), Expect = 6.150e-106 Identity = 154/171 (90.06%), Postives = 158/171 (92.40%), Query Frame = 1
Query: 1 RKKPCRREESGWFTNNSGLECSMCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEGELPLPLVRGFRPSNDCICQRRDCFYGFLLEWEAKPALRTCSVCKRGYPVKDQKRWYSVDVVDDNIPEGGGSGRTQAWYCQACNQARIRPSGRQLKKRL 513
RKKPCRR E GWFTNN GLECSMCPSGVVHAVSDKLCSACHRSEG AGFTHL+GPRLERATRLFLAEYQEGEGELPLPLVRGF PSNDCICQRRDCFYGFLLE EAKP LRTCSVCKRGYPVKDQKRWYSVDVVDDNI EGGGSGRTQAWYCQACNQARIR G +K++
Sbjct: 85 RKKPCRRAECGWFTNNPGLECSMCPSGVVHAVSDKLCSACHRSEGLAGFTHLRGPRLERATRLFLAEYQEGEGELPLPLVRGFCPSNDCICQRRDCFYGFLLEREAKPELRTCSVCKRGYPVKDQKRWYSVDVVDDNITEGGGSGRTQAWYCQACNQARIRAIGEATQKKV 255
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5JUC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC7_9PHAE) HSP 1 Score: 333 bits (853), Expect = 1.170e-104 Identity = 154/171 (90.06%), Postives = 158/171 (92.40%), Query Frame = 1
Query: 1 RKKPCRREESGWFTNNSGLECSMCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEGELPLPLVRGFRPSNDCICQRRDCFYGFLLEWEAKPALRTCSVCKRGYPVKDQKRWYSVDVVDDNIPEGGGSGRTQAWYCQACNQARIRPSGRQLKKRL 513
RKKPCRR E GWFTNN GLECSMCPSGVVHAVSDKLCSACHRSEG AGFTHL+GPRLERATRLFLAEYQEGEGELPLPLVRGF PSNDCICQRRDCFYGFLLE EAKP LRTCSVCKRGYPVKDQKRWYSVDVVDDNI EGGGSGRTQAWYCQACNQARIR G +K++
Sbjct: 85 RKKPCRRAECGWFTNNPGLECSMCPSGVVHAVSDKLCSACHRSEGLAGFTHLRGPRLERATRLFLAEYQEGEGELPLPLVRGFCPSNDCICQRRDCFYGFLLEREAKPELRTCSVCKRGYPVKDQKRWYSVDVVDDNITEGGGSGRTQAWYCQACNQARIRAIGEATQKKV 255
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5JM20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM20_9PHAE) HSP 1 Score: 330 bits (845), Expect = 3.150e-103 Identity = 152/164 (92.68%), Postives = 153/164 (93.29%), Query Frame = 1
Query: 1 RKKPCRREESGWFTNNSGLECSMCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEGELPLPLVRGFRPSNDCICQRRDCFYGFLLEWEAKPALRTCSVCKRGYPVKDQKRWYSVDVVDDNIPEGGGSGRTQAWYCQACNQARIRPSG 492
RKKPCRR E GWFTNN GLECSMCPSGVVHAVSDKLCSACHRSEG AGFTHL+GPRLERATRLFLAEYQEGEGELPLPLVRGF PSNDCICQRRDCFYGFLLE EAKP LRTCSVCKRGYPVKDQ RWYSVDVVDDNI EGGGSGRTQAWYCQACNQARIR G
Sbjct: 85 RKKPCRRAECGWFTNNPGLECSMCPSGVVHAVSDKLCSACHRSEGLAGFTHLRGPRLERATRLFLAEYQEGEGELPLPLVRGFCPSNDCICQRRDCFYGFLLEREAKPELRTCSVCKRGYPVKDQTRWYSVDVVDDNITEGGGSGRTQAWYCQACNQARIRAIG 248
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5LCA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCA1_9PHAE) HSP 1 Score: 310 bits (793), Expect = 1.210e-99 Identity = 147/164 (89.63%), Postives = 149/164 (90.85%), Query Frame = 1
Query: 67 MCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEGELPLPLVRGFRPSNDCICQRRDCFYGFLLEWEAKPALRTCSVCKRGYPVKDQKRWYSVDVVDDNIPEGGGSGRTQAWYCQACNQARIRPSGRQLKKRLRHRATRADLKPMNRR 558
MCPSG VHAVSDKLCSACHRSEG AGFTHL+GPRLERATRLF AEYQEGEGELPLPLVRGF PSNDCICQRRDCFYG LLE E KP L TCSVCKRGYPVKDQKRWYSVDVVDDNI EGGGSGRTQAWYCQACNQARIR G +KRLRHRATRADLKPMNRR
Sbjct: 1 MCPSGAVHAVSDKLCSACHRSEGLAGFTHLRGPRLERATRLFFAEYQEGEGELPLPLVRGFCPSNDCICQRRDCFYGCLLEREEKPELPTCSVCKRGYPVKDQKRWYSVDVVDDNITEGGGSGRTQAWYCQACNQARIRAIGEATQKRLRHRATRADLKPMNRR 164
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5KF76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF76_9PHAE) HSP 1 Score: 283 bits (725), Expect = 1.060e-90 Identity = 130/142 (91.55%), Postives = 133/142 (93.66%), Query Frame = 1
Query: 4 KKPCRREESGWFTNNSGLECSMCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEGELPLPLVRGFRPSNDCICQRRDCFYGFLLEWEAKPALRTCSVCKRGYPVKDQKRWYSVDVVDDNIPEGGG 429
KKPCRR E GWF NN GLECS+CPSGVV+AVSDKLCSACHRSEG AGFTHL+GPRLERATRLFLAEYQEGEGELPLPLVRGF PSNDCICQRRDCFYGFLLE EAKP LRTCSVCKRGYPVKDQKRWYSVDVVDDNI EGGG
Sbjct: 161 KKPCRRAECGWFINNPGLECSVCPSGVVNAVSDKLCSACHRSEGLAGFTHLRGPRLERATRLFLAEYQEGEGELPLPLVRGFCPSNDCICQRRDCFYGFLLEREAKPELRTCSVCKRGYPVKDQKRWYSVDVVDDNITEGGG 302
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5KBR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR1_9PHAE) HSP 1 Score: 223 bits (568), Expect = 1.600e-63 Identity = 115/131 (87.79%), Postives = 122/131 (93.13%), Query Frame = 3
Query: 483 AIGEATQEKVAASSNSGRPEADESAPEKPFTRVRALVIKAVGRGDILYWEDVFDWLSAECAKDGDQELERRSGRKAVRQMFESIASADGSQSRVVSSEGGFGDGRQRLLCLFPINARDEVIASLLLRARLA 875
AIGEATQ+KVA SSNSGRP+ DE APEKPF+R+RALVI AV RGDILYWEDVFDWLSAE AKDGD ELERRSGRKAVRQ FESIASADGSQ+RVVSSEGGFGDGRQR+LCLFP+NARDEVIASL LRARLA
Sbjct: 124 AIGEATQKKVATSSNSGRPKVDEPAPEKPFSRLRALVITAVARGDILYWEDVFDWLSAERAKDGDHELERRSGRKAVRQKFESIASADGSQARVVSSEGGFGDGRQRILCLFPVNARDEVIASLALRARLA 254
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5L8Z0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Z0_9PHAE) HSP 1 Score: 161 bits (407), Expect = 1.830e-40 Identity = 76/160 (47.50%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 1 RKKPCRREESGWFTNNSGLECSMCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEGELPLPLVRGFRPSNDCICQRRDCFYGFLLEWEAKPALRTCSVCKRGYPVKDQKRWYSVDVVDDNIPEGGGSGRTQAWYCQACNQARI 480
R+K C R E GW T++ G ECS C VVH+ DKLCSACHRS D GF HL+ RL RA F+ + +GE LP LVR FRPSNDC+C R DCF F E E K R C C K RWY +D DD++ EG + W+C C Q R+
Sbjct: 225 RRKACERMECGWVTDHPGTECSKCSGSVVHSDDDKLCSACHRSPNDDGFRHLRADRLGRAVD-FVTAWTQGEKTLPPALVRDFRPSNDCLCARPDCFLVFFAEEERKAESRVCGTCGYRKSGKSIVRWYPMDAADDDVAEGNATVSDGLWWCGRCYQKRL 383
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 161 bits (407), Expect = 3.270e-40 Identity = 76/160 (47.50%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 1 RKKPCRREESGWFTNNSGLECSMCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEGELPLPLVRGFRPSNDCICQRRDCFYGFLLEWEAKPALRTCSVCKRGYPVKDQKRWYSVDVVDDNIPEGGGSGRTQAWYCQACNQARI 480
R+K C R E GW T++ G ECS C VVH+ DKLCSACHRS D GF HL+ RL RA F+ + +GE LP LVR FRPSNDC+C R DCF F E E K R C C K RWY +D DD++ EG + W+C C Q R+
Sbjct: 225 RRKACERMECGWVTDHPGTECSKCSGSVVHSDDDKLCSACHRSPNDDGFRHLRADRLGRAVD-FVTAWTQGEKTLPPALVRDFRPSNDCLCARPDCFLVFFAEEERKAESRVCGTCGYRKSGKSIVRWYPMDAADDDVAEGNATVSDGLWWCGRCYQKRL 383
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Match: A0A6H5JL54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL54_9PHAE) HSP 1 Score: 150 bits (380), Expect = 3.710e-37 Identity = 74/152 (48.68%), Postives = 84/152 (55.26%), Query Frame = 1
Query: 25 ESGWFTNNSGLECSMCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEGELPLPLVRGFRPSNDCICQRRDCFYGFLLEWEAKPALRTCSVCKRGYPVKDQKRWYSVDVVDDNIPEGGGSGRTQAWYCQACNQARI 480
E W T+N G ECS CP VVH+ DKLCSACHRS D GFTHL+ RL RA FLA + GE LP LVR RPSNDC+CQR DC F E K R C K RWY VD DD++ EG + W+C C Q R+
Sbjct: 2 ECRWVTDNPGTECSKCPGSVVHSDGDKLCSACHRSPNDDGFTHLRPDRLGRAVD-FLAAWTPGEKTLPPALVRDLRPSNDCLCQRPDCILAFFAGEERKAESRVRGSCGNRKFGKSSVRWYPVDAADDDVAEGNAAVSDGLWWCGRCYQKRL 152 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16154.1 >prot_E-siliculosus-1a_M_contig8.16154.1 ID=prot_E-siliculosus-1a_M_contig8.16154.1|Name=mRNA_E-siliculosus-1a_M_contig8.16154.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=176bp MCPSGVVHAVSDKLCSACHRSEGDAGFTHLKGPRLERATRLFLAEYQEGEback to top mRNA from alignment at E-siliculosus-1a_M_contig8:1444418..1445619- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16154.1 ID=mRNA_E-siliculosus-1a_M_contig8.16154.1|Name=mRNA_E-siliculosus-1a_M_contig8.16154.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1202bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1444418..1445619- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1444418..1445619- >mRNA_E-siliculosus-1a_M_contig8.16154.1 ID=mRNA_E-siliculosus-1a_M_contig8.16154.1|Name=mRNA_E-siliculosus-1a_M_contig8.16154.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1056bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1444418..1445619- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |