mRNA_E-siliculosus-1a_M_contig8.16130.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 420 bits (1079), Expect = 1.730e-134 Identity = 344/502 (68.53%), Postives = 381/502 (75.90%), Query Frame = 1
Query: 253 DRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ATIMKVFLDKDSNNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAK-TGNNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRI--------PERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1719
DRSR+ GFE+EIFKL++REAT EQWKEWLRAPLEH AA+GNLDLFTRLMDAGA EAGWRGCHGRTLLGAAA G+S+K+IR LLT GA DVNVLFG + ESALHVAAARGA++ AL++AGA PNV + P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++K LDK S+ V+ ++LGW ALH+VAS RD GDAVRVLL AGADVN K T ++ TPLH+A ++ + S GTI ALLEGGAN N R D+TPLH+AC + VELLL WGADEKL +NDGDTPADV+ E+ND +EE EADNQRI +RSWRRRGWLVLSR CP RV IANG SS S I G S KVARVSG GS DDEETED MMV R LVGR+VGLEA+GLFRLVVGFL
Sbjct: 10 DRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 5.270e-133 Identity = 367/502 (73.11%), Postives = 403/502 (80.28%), Query Frame = 1
Query: 253 DRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSNNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNYF--TPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRI--------PERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSG---KVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1719
DR+RVDGFEVEIFKLVQREAT +QWKEWLRAPLEH AA GNL LFTRLMDAGA EAGWRGC GRTLLGAAA K+ K++RALLT GAKSDVNVLFGAK ESALH+AAARGAEEA+ AL++AGA PN+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TI+K FLD D++ VNATD+ G+TALHH A + RD GDAVRVLL AGADV+AKT +++ PLH+A RV S GTIRALLEGGA+ N R+ D TPLH AC SVAAVELLL WGADEKLTD+ TPAD+I + + +IEAD QRI +RSWRRR WLVLSR CP RV+IAN SGS +GSS +G K+AR SG+ SGG + ETED MMV RGLV R+VGLEADGLFRLVVGFL
Sbjct: 12 DRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 381 bits (979), Expect = 3.920e-120 Identity = 254/502 (50.60%), Postives = 293/502 (58.37%), Query Frame = 1
Query: 253 DRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSNNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAK-TGNNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRIPE--------RSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSS----QGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1719
DRSR+DGFE+EIFKLVQR AT EQWKEWLRAP EH AA+GNLD FTRLMDAGA AGWRGC+GRTLLGAAAFG+S+K++R LT GA DVNVLFG + E AL++ GA PNV + + PL XXXXXXXXXXXX A ++K LDKDS V+ATD GW ALH+ AS+ GP RDNGDAVRVLL AGADV+AK T + T L++A ++R+AS GTIRALLEGGAN N R D+TPLH+AC S VELLL WGAD+KLT N G TPA V+ A +++D +EE+EADNQRI RSWRRRGWLVLSR CP RVQIANG S G S KVA+VSG+ S DDEET DDMMV R LVGR++ LEADG+FRLVVGFL
Sbjct: 10 DRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGERE----------------ALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQ-------------------ADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 363 bits (932), Expect = 8.320e-113 Identity = 337/499 (67.54%), Postives = 388/499 (77.76%), Query Frame = 1
Query: 256 RSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGA-RGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSNNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNY--FTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRI--------PERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1719
RSR+DGFE+EIFKLVQ E T EQWK+WL+ PLEH AA+GNLDLFTRLMDAG GE GWRGC+GRTLLGAAA+GKSDKV+RALL GA DVNVLFG + +SALHVAAARGAEEA+ AL++AGA PN+ + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+ D+ G+TA+H + GP DNG VR+LLEAG VNA+TG ++ +TPLH A +R+AS+ T ALLEGGAN+N TPLH+ACM +VAAVELLL WGADE ++++GD PADVI + D +E+++AD++RI +RSWRRRGWLVLSR CP RVQIAN GS + + C KVARVSG+ GGD+EE E+ M V W GLVG ++GLEADGLFRLVVGFL
Sbjct: 12 RSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-VDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIAN---KGSRVNRNS-CPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 301 bits (771), Expect = 8.240e-83 Identity = 233/551 (42.29%), Postives = 289/551 (52.45%), Query Frame = 1
Query: 247 RRDRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAAR-------------------GAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSNNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNYF--TPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRI--------PERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL*GTRSERCPLLKPNVAV*FFMPSGGDRTVWM 1812
R DRS +DGFEVEI +LV+ AT EQW++WLR PLEH AAKGNLDLFTRLMDAG+ GE GWRGC+GRTLLGA A+G+S+K++RALL G D NV F A+ +SALHVAAAR G + + L++ GA + PLXXXXXXXXXXXXXXXXX ATI+K FL+ + V+ TD+ +T LH A + +G V VLLEAGADVNAKT N F TPLH+A +RV+S+ TIRA ++ ++TPLH+AC + A V+LLL WGAD ++ +G PADVI A +E+ +E IEAD++ + ++SWRR GWLVLSR P RVQI N SGS S CS K+ARVSG S DDE E+ MMV WR L+ R+VGLEADGLFRL+VGFL G +PSGG + M
Sbjct: 8 REDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAARDPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGWSSLPNAVCCGH-----------------------------------------ATIVKAFLETGID-VDTTDDQAYTVLHRAADM------DGCVVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGS----SNSCSTKLARVSGKDSSRDDE-LENQMMVDWRVLLDRLVGLEADGLFRLMVGFLCGKEEGN------------LLPSGGCNFIIM 493
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 266 bits (680), Expect = 6.430e-73 Identity = 201/505 (39.80%), Postives = 238/505 (47.13%), Query Frame = 1
Query: 253 DRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGE----FGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSNNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNYF-TPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRI--------PERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSS-------QGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLV 1707
DRSRVDGF++EIFKLVQREAT EQWKEWLRAPLEH AAK L T + W S+K++R LLT GA D NVLFG +HESALHV ARGAE++ AL++AGA P + + G+ F + A ++ LDKD+ + SV GP DNGDAVR LL GADVNAKT ++ +PLH+A +R+AS G I D PLHLAC SV VELLL WGADEKLT++ G TPADVI A ++ D ++E EAD+QRI +RSWRRRGWLVLSR CP RVQIANG S G + KVARVSG+ S DDE TE DM+V R LVGR+VGLEADGL RLV
Sbjct: 10 DRSRVDGFKIEIFKLVQREATSEQWKEWLRAPLEHAAAKELGSLHTA--------DGHW----------------SEKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRALMIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQSTPLHLAASEGRALCLSELLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGH--ADVLTALLDKDN-------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTTDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNAAKVARVSGESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV 475
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 253 bits (647), Expect = 1.770e-72 Identity = 219/393 (55.73%), Postives = 250/393 (63.61%), Query Frame = 1
Query: 241 ETRRDRSRVDGFEVEIFKLVQREATLEQWKEWLRAPLEHVAAKGNLDLFTRLMDAGARGEAGWRGC--HGRTLLGAAAFG-KSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ATIMKVFLDKDSNNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKT----GNNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVI 1392
E DRSRVDGFE+EIFKLV+ EAT +QWK+WLR PLEH AAKGNLDLFTRL+DAGA GE GW+G RTLLGAAA G KSD +++ALL G VN FGA ESALHV ARGAE+A+ AL+MAGA PN+ N+ PL XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++K FLDKDS V+ATD GWTALH+ A V DNGDAVR LLEAGADVN KT ++ FTPLHVA ++R+AS+ I ++TPLH+ACM +V+ VELLL WGADE L ++ DTPAD I
Sbjct: 5 EREEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVTDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVELLLRWGADEMLKNHRADTPADEI 397
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 242 bits (617), Expect = 4.470e-70 Identity = 146/243 (60.08%), Postives = 173/243 (71.19%), Query Frame = 1
Query: 1018 SNNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTG-NNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRI--------PERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1719
+++VNAT++LG ALH+ ASV GP D GDAVRVLL AG DVN T ++ FTPLHVA R+AS GTIRALLEG A+ + R + D+TPLH+AC SV+ VELLL WGADE+LT+N GD PADVI A ++ D +EE +ADNQRI +RSWRRRGWLVLSR CP RVQI NG SS GS G S KVA +SG+ +G DEETED +M R LV +VGLEAD LFRLVV FL
Sbjct: 32 NSDVNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIASDGTIRALLEG-ADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNGSSS---RGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 233 bits (594), Expect = 7.870e-67 Identity = 143/259 (55.21%), Postives = 169/259 (65.25%), Query Frame = 1
Query: 1018 SNNVNATDNLGWTALHH-VASVGGPSRDNGDAVRVLLEAGADVNAKT--GNNYFTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPA------------DVIEAPEENDNTEEEIEADNQRI--------PERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQG--CSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1719
S+ V+ATD+ G+TALH V + P DNGD VRVLLEAGADV+AKT N TPLH A ++R+A +G IRALLEGGAN N R+ D+TPLH+AC SV VE LL WGADEKLTD DG+TPA DV +AP EN +E IEAD RI +RSW RR WLVLSR CP +VQI+N SS ++ S G S ++ V+ GGDD+ETED V WR LV R+VGLEAD LFRLVVGFL
Sbjct: 9 SSEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSGSSGDGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Match: A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE) HSP 1 Score: 217 bits (552), Expect = 1.790e-59 Identity = 233/442 (52.71%), Postives = 258/442 (58.37%), Query Frame = 1
Query: 397 MDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAKHESALHVAAARGAEEATTALVMAGARPNVVNLGEFGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIMKVFLDKDSNNVNATDNLGWTALHHVASVGGPSRDNGDAVRVLLEAGADVNAKTGNNY-FTPLHVAASQRVASVGTIRALLEGGANSNGRNKLDETPLHLACMIPSVAAVELLLLWGADEKLTDNDGDTPADVIEAPEENDNTEEEIEADNQRIPERSWRRRGWLVLSRCCPARVQIANGRSSGSLIGSSQGCSGKVARVSGDGSGGDDEETEDDMMVYWRGLVGRIVGLEADGLFRLVVGFL 1719
MDAGA G+AGWR C GRTLLGAAA+G DK++R LL+ GA AARGA+++ A ++AGA P++ + PL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++V + NV ALH A RDNGDAVR LL AGADVN + NN FTPLH+AA R+AS GTIRALLEGGAN N + DETPLH AC SVA VELLL WGADEKLT++ GDTPADVI RSWRRRGWLVLSR C RV IAN SS KVAR SG+ +G DEET D MMV R LVGR+VGLEA GLFRLVVGFL
Sbjct: 1 MDAGANGKAGWRECRGRTLLGAAAYG--DKMVRTLLSAGAT------------------AARGADDSCRAFMVAGADPSLRDRVGHSPLHLAAVARHHRVAGMLLLKGSDVVAKTAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHRMLSNNTRSP------------LEVAANGGHGNV--------AALHCAAVFVVAVRDNGDAVRALLGAGADVNVEATNNICFTPLHLAACHRIASDGTIRALLEGGANINACTE-DETPLHEACWHLSVAGVELLLHWGADEKLTNDVGDTPADVIGT--------------------RSWRRRGWLVLSRYCQTRVNIANRSSSSGXXXXXA----KVARASGEDAGRRDEETADQMMVDLRDLVGRLVGLEAGGLFRLVVGFL 377 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16130.1 >prot_E-siliculosus-1a_M_contig8.16130.1 ID=prot_E-siliculosus-1a_M_contig8.16130.1|Name=mRNA_E-siliculosus-1a_M_contig8.16130.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=442bp MDAGARGEAGWRGCHGRTLLGAAAFGKSDKVIRALLTTGAKSDVNVLFGAback to top mRNA from alignment at E-siliculosus-1a_M_contig8:1153787..1157119+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16130.1 ID=mRNA_E-siliculosus-1a_M_contig8.16130.1|Name=mRNA_E-siliculosus-1a_M_contig8.16130.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3333bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1153787..1157119+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1153787..1157119+ >mRNA_E-siliculosus-1a_M_contig8.16130.1 ID=mRNA_E-siliculosus-1a_M_contig8.16130.1|Name=mRNA_E-siliculosus-1a_M_contig8.16130.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2652bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1153787..1157119+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |