mRNA_E-siliculosus-1a_M_contig8.16126.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16126.1 vs. uniprot
Match: A0A6H5JAA8_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAA8_9PHAE) HSP 1 Score: 1569 bits (4062), Expect = 0.000e+0 Identity = 884/1080 (81.85%), Postives = 905/1080 (83.80%), Query Frame = 1
Query: 127 MTMENGSHNHHHSLATNVHPRACARRHHLGRVRVIFDSYSYIELWFDEHTLWRLSANDVKREAHRITSALVGDAESHAAATRPEGA-ASFERGEQTGPLASDPRPSTGTSDSLVDRRGNTAVEGSEAHGGVPTAAGAATWPNNGTLRGKSLHGQPRVVTGRFPVAASSDEGGAELNRGHVPNSSPHEPRAGEDEAAAGSGTVAGNVPGDALGTTAAAVAYDARLRLCSDVLHFRGKGLRPGAFLFLAVPDANGGDANRDGRTGTSLRGGTSSGSTXXXXXXXXXXXXXXXXXXXXXAVAAAETTTXXXCXXXXXXGPETDDASGXXXXXXXXXXXXXXXXXXXXDGKGISRQHAQAPGVGEEEQDQRRTSRLPSPTPRAGCVEHGFAGPDGAQGRGGELWVTDESAPLLSALSSQWAASAAPPADDAESSAAAGTRRSAHRVALTPHGATGGTPTTVEGPRNDHPQTYPAFPAAVTLRVMPSGRAPLPPLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLQKRFSEFVALHATLSGRGGRGGEGDRIPEDRLPKPPMRTFGMLRLFPEKMERLRRGQLERYLQELLSIPEALNNRAVLSFFGLVSSSRHDLMFPPNPKRRGGQRAGKSPMLRAVAPHSTASETPTTSSNHTTRGSTGRRMADCRRGQATAGEXXXXXXXXXD--VGECDGGATTGQREAVEGEATRSLPPTHETGRQSPRPPNGNSEGGLGSACQATENERCREHQAACTGGEGEPRAATGKEERVVRKVERVNALEQEANGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGGPTGRLELLESTHGGVHLYPLVERVRAYHDQGFASRVAFRRLRCPRPAESRARLEEFSRQVEGKTYGIVLPFTPSGPKGDRSRTKRTPPPPSSPAMQQTMPSESTDCGGGEHGDVARGGRAGLEGRRGQGPAFAVAKEEEEVVMCANAAGSAEGQRGSATANAIGETTTLPSFSSGKSEKTALSPSYLCSQLVGAALSEMGVLRGGGNDLGWLWVVPGAFGQGGAVDSRLAAGVALGEEILVDDAHEPEVAGAVLLGDAL 3357
MTMENG HNH HSLATNVHP +CARRHHLGRVRVIFDSYSYIELWFDE TLWR SAND+KREAHRI SALVGDAESHAAATRPEGA ASF++GEQ G LASDPRPSTG SDSLVDRRG TAV GSEAHGGVPTAAGAATWPNNGTLRGK LH QPR+VTGRFP AASSDE GAELNR HVPNSS HE RAGE+EAAAGSGTVAGNVPGD LGTTA AVAYDARLRLCSDVLHF GKGLRPGAFLFLAVPDA GGDA+RDGRTG+ L GGT XXXXXXXXXXX VAAAETTT GP+TDDAS DG RRTSR PSPTPRAG VEHGFAG DGAQGRGGELWVTDESAPLLSALSSQWAASAAPPADDAESS AA TRRSAH ALT HGATGGTPTT +GPRNDHPQ YPAFPAAVTLR MPSGRAPLPPLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLQKRFSEFVALHA LSGRG RGGEGDRIPEDRLP PPMRTFGMLRLFP KMERLRR QLERYLQELLSIPEAL NRAVLSF GLVSSSRHDLMFPPNPK RGGQRAGKSP LRAVAPHS ASETPTTSSNHTTRGSTGRRMAD RGQA AGE XXXXXXXX VGECDGGATTGQREA EGEAT LPP +ET SP PP+GNS+ GLGSA QATENER REH A G EGEPRAA G+EE VVRKVERVNALEQEA+GGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVV GGP+ RLELLESTHGGVHLYPLVERVRAYHDQGFAS VAFRRLRCPRPAESRARLE FSRQVEGKTYGIVLP TPSGPK A+Q TM ESTD G GE GDVARGGRAGLEG RGQGPAFAVAK+EEEVV+CANAAG+ EGQR SATANAIGETT LP+FSSG SEKTALSPSYLCSQLVGAALSEMGVLRGGG DLGWLWV PGAFGQGGAVDSRLAAGVALGEEILVD AHEPEV GAVLL DAL
Sbjct: 1 MTMENGRHNHLHSLATNVHPNSCARRHHLGRVRVIFDSYSYIELWFDERTLWRSSANDIKREAHRIASALVGDAESHAAATRPEGAGASFDQGEQAGALASDPRPSTGASDSLVDRRGTTAVGGSEAHGGVPTAAGAATWPNNGTLRGKRLHSQPRIVTGRFPEAASSDEVGAELNRRHVPNSSLHELRAGENEAAAGSGTVAGNVPGDGLGTTATAVAYDARLRLCSDVLHFCGKGLRPGAFLFLAVPDATGGDASRDGRTGSRLSGGTXXXXXXXXXXXXXXXXSAKGLDADDLVVAAAETTTGSY-GAGVGVGPKTDDASRRAGTGVEGREAAKEAGGRSGDGXXXXXXXXXXXXXXXXXXXXRRTSREPSPTPRAGSVEHGFAGRDGAQGRGGELWVTDESAPLLSALSSQWAASAAPPADDAESSTAAETRRSAHGAALTSHGATGGTPTTGKGPRNDHPQLYPAFPAAVTLRAMPSGRAPLPPLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLQKRFSEFVALHAALSGRGARGGEGDRIPEDRLPAPPMRTFGMLRLFPVKMERLRRHQLERYLQELLSIPEALANRAVLSFLGLVSSSRHDLMFPPNPKCRGGQRAGKSPTLRAVAPHSIASETPTTSSNHTTRGSTGRRMADSLRGQAAAGESXXXXXXXXXXGVGECDGGATTGQREAGEGEATCFLPPANETAYHSPPPPHGNSDDGLGSARQATENERYREHPAVDMGREGEPRAAAGQEEEVVRKVERVNALEQEAHGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVCGGPSARLELLESTHGGVHLYPLVERVRAYHDQGFASTVAFRRLRCPRPAESRARLEVFSRQVEGKTYGIVLPCTPSGPKXXXXXXXXXXXXXXXXAVQPTMLRESTDSGRGERGDVARGGRAGLEGTRGQGPAFAVAKKEEEVVLCANAAGNGEGQRRSATANAIGETTKLPTFSSGTSEKTALSPSYLCSQLVGAALSEMGVLRGGGKDLGWLWVAPGAFGQGGAVDSRLAAGVALGEEILVD-AHEPEVVGAVLLDDAL 1078
BLAST of mRNA_E-siliculosus-1a_M_contig8.16126.1 vs. uniprot
Match: D8LQF4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQF4_ECTSI) HSP 1 Score: 933 bits (2411), Expect = 0.000e+0 Identity = 513/609 (84.24%), Postives = 520/609 (85.39%), Query Frame = 1
Query: 1561 MPSGRAPLPPLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLQKRFSEFVALHATLSGRGGRGGEGDRIPEDRLPKPPMRTFGMLRLFPEKMERLRRGQLERYLQELLSIPEALNNRAVLSFFGLVSSSRHDLMFPPNPKRRGGQRAGKSPMLRAVAPHSTASETPTTSSNHTTRGSTGRRMADCRRGQATAGEXXXXXXXXXDVGECDGGATTGQREAVEGEATRSLPPTHETGRQSPRPPNGNSEGGLGSACQATENERCREHQAACTGGEGEPRAATGKEERVVRKVERVNALEQEANGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGGPTGRLELLESTHGGVHLYPLVERVRAYHDQGFASRVAFRRLRCPRPAESRARLEEFSRQVEGKTYGIVLPFTPSGPKGDRSRTKRTPPPPSSPAMQQTMPSESTDCGGGEHGDVARGGRAGLEGRRGQGPAFAVAKEEEEVVMC---------ANAAGSAEGQRGSATANAIGETTTLPSFSSGKSEKTALSPSYLCSQLVGAALSEMGVLRGGGNDLGWLWVVPGAFGQGGAVDSRLAAGVALGEEILVDDAHEPEVAGAVLLGDALN 3360
MPSGR PLPPLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLQKRFSEFVALHATLSGRG RGGEGDRIPEDRLPKPPMRTFGMLRLFPEKMERLRR QLERYLQELLSIPEAL NRAVLSF GLVSSSRHDLMFPPNP RRGGQRAGKSP LR+VAPHST TS NHT RGST RRMADCRRGQA AGE XXXXXXXX + G QSP PP GNS+GGLGSA QATENERCREH A TG EGEPRAA GKEE VVRKVERVNALEQEA+GGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGGP+GRL+LLESTHGGVH YPLVERVRAYHDQGFASRVAFRRLRCPRPAESRARLEEFSRQVEGKTYGIVLPFTPSGPKGDRSRTK SSPA Q TMPSESTDCGGGEHGDVARGGRAGLE RRGQGPAFAVAKE ANAAGS EGQRGSATA+AIGETTTLPSFSSGKSEKT LS SYLCSQLVGAALSEMGVLRGGG DLGWLWVVPGAFGQGGAVDSRLAAGVALGEEILVD AHEPEVAGAVLLGDALN
Sbjct: 1 MPSGRVPLPPLCCGVCGSSWETDSFGRGYRAYHLAVANNASLVWYLQKRFSEFVALHATLSGRGARGGEGDRIPEDRLPKPPMRTFGMLRLFPEKMERLRRDQLERYLQELLSIPEALANRAVLSFLGLVSSSRHDLMFPPNPNRRGGQRAGKSPTLRSVAPHST------TSGNHTARGSTSRRMADCRRGQAAAGESXXXXXXXXXX--------------------------XDMGCQSPPPPKGNSDGGLGSARQATENERCREHPAVGTGREGEPRAAAGKEEEVVRKVERVNALEQEAHGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGGPSGRLDLLESTHGGVHRYPLVERVRAYHDQGFASRVAFRRLRCPRPAESRARLEEFSRQVEGKTYGIVLPFTPSGPKGDRSRTKXXXXXXSSPAFQPTMPSESTDCGGGEHGDVARGGRAGLESRRGQGPAFAVAKEXXXXXXXXXXXXXXXXANAAGSGEGQRGSATADAIGETTTLPSFSSGKSEKTPLSASYLCSQLVGAALSEMGVLRGGGKDLGWLWVVPGAFGQGGAVDSRLAAGVALGEEILVD-AHEPEVAGAVLLGDALN 576
BLAST of mRNA_E-siliculosus-1a_M_contig8.16126.1 vs. uniprot
Match: A0A7S3Z3J4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z3J4_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 5.510e-11 Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 2479 GDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGG---------PTGRLELLESTHGGVHLYPLVERVRAYHDQGFASRVAFRRLRCPRPAESRAR-LEEFSRQVEGKTYGI 2781
GD+VLFR +G L +QR VL +++DHVGVVVS P+ L +LEST+ GV YPL R+RA+H G +A R+L C + A+ L+EF+ EGK YG+
Sbjct: 181 GDLVLFRTQGTLPAIQRTVLSSEFDHVGVVVSKQMSTFSKQFHPSAGLYILESTNEGVQSYPLRTRLRAWHLSGAV--MALRQLECKKTKLEVAKILQEFTADSEGKGYGL 289
BLAST of mRNA_E-siliculosus-1a_M_contig8.16126.1 vs. uniprot
Match: A0A5D6Y1I1_9STRA (PX domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1I1_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 6.910e-8 Identity = 50/124 (40.32%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 2434 RKVERVNALEQEANGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGGPTGRLELLESTHGGVHLYPLVE---RVRAYHDQGFASRVAFRRLRCPRPAESRAR---LEEFSRQVEGKTYGIVL 2787
R V + L GD+VLFRC G +S +QR + ++WDHVGVVV G LLE+T GV +PLV R+ AY VA R+L P S AR L F+ +VEG YG+ +
Sbjct: 327 RDVLHLRVLNYYVAPGDLVLFRCCGPVSGIQRSMTGSEWDHVGVVVPGHSPTSFYLLEATGEGVSAFPLVSATSRLIAY-SAFHVKYVALRKLHTPLITLS-ARFDLLRRFAFEVEGNPYGLSV 448
BLAST of mRNA_E-siliculosus-1a_M_contig8.16126.1 vs. uniprot
Match: A0A7S2U474_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U474_9EUKA) HSP 1 Score: 62.8 bits (151), Expect = 1.160e-7 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 2479 GDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGG---------PTGRLELLESTHGGVHLYPLVERVRAYHDQG 2673
GD+VLFR +G L +QR VL +++DHVGVVVS P+ + +LEST+ GV YPL R+RA+H G
Sbjct: 66 GDLVLFRTQGTLPAIQRTVLSSEFDHVGVVVSKQMSTFSKQFHPSAGMYILESTNEGVQSYPLRTRLRAWHLSG 139
BLAST of mRNA_E-siliculosus-1a_M_contig8.16126.1 vs. uniprot
Match: A0A1R2CM79_9CILI (PH domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CM79_9CILI) HSP 1 Score: 66.6 bits (161), Expect = 1.440e-7 Identity = 42/123 (34.15%), Postives = 70/123 (56.91%), Query Frame = 1
Query: 2470 ANGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGGPTGRLELLESTHG-GVHLYPLVERVRAYHDQGFASRVAFRRLRCPRPAESRARLEEFSRQVEGKTYGI----VLPFTPSGPKGDRS 2823
A GD++LFR +G+ S++QR + ++DHV +++ +G++ LLE+TH GV + + + G R+ +R L+ R E +LEEF ++VEGK YG+ +LP+ GD S
Sbjct: 212 AGTGDLLLFRSKGLNSKIQRGLTGGKYDHVALILCYS-SGKICLLEATHSTGVDILDWDDFIGLGFHLG-VERIVYRSLKFERTIEKLEKLEEFIKRVEGKAYGLSMKKLLPYFTKANPGDES 332
BLAST of mRNA_E-siliculosus-1a_M_contig8.16126.1 vs. uniprot
Match: A0A2D5XZU2_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Pacearchaeota archaeon TaxID=2026773 RepID=A0A2D5XZU2_9ARCH) HSP 1 Score: 56.6 bits (135), Expect = 4.110e-5 Identity = 40/114 (35.09%), Postives = 55/114 (48.25%), Query Frame = 1
Query: 2479 GDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGGPTGRLELLEST-------------HGGVHLYPLVERVRAYHDQGFASRVAFRRLRC--PRPAESRARLEEFSRQVEGKTY 2775
GD+VLF +G +S L +WV +++W H+G+V+ L L EST GV L PL ER++ Y RV RRL A L EF R+V+G+ Y
Sbjct: 13 GDIVLFSGKGRISGLIKWVTKSEWSHIGMVLRLVEWNMLLLWESTTLSKIKDIQSGEARQGVQLVPLSERLKVYD-----GRVGIRRLNYFDKYQAVDTMALMEFRREVKGRPY 121 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16126.1 >prot_E-siliculosus-1a_M_contig8.16126.1 ID=prot_E-siliculosus-1a_M_contig8.16126.1|Name=mRNA_E-siliculosus-1a_M_contig8.16126.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1121bp MELQIGVWVHLSSLLGVRPPLAFQAHCYTLLAAHRRTTKTNGMTMENGSHback to top mRNA from alignment at E-siliculosus-1a_M_contig8:1105864..1113164- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16126.1 ID=mRNA_E-siliculosus-1a_M_contig8.16126.1|Name=mRNA_E-siliculosus-1a_M_contig8.16126.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7301bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1105864..1113164- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1105864..1113164- >mRNA_E-siliculosus-1a_M_contig8.16126.1 ID=mRNA_E-siliculosus-1a_M_contig8.16126.1|Name=mRNA_E-siliculosus-1a_M_contig8.16126.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=6726bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1105864..1113164- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |