mRNA_E-siliculosus-1a_M_contig8.16115.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: A0A6H5K6Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Q8_9PHAE) HSP 1 Score: 417 bits (1072), Expect = 1.930e-141 Identity = 217/224 (96.88%), Postives = 220/224 (98.21%), Query Frame = 3
Query: 120 MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLKWEGGRPRRVLDELMQGWRGW 791
MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFA+LEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISE+L+WEGGRPRRVLDELMQ W
Sbjct: 1 MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFALLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEELQWEGGRPRRVLDELMQEGMAW 224
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: D8LQG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG3_ECTSI) HSP 1 Score: 358 bits (920), Expect = 2.280e-118 Identity = 192/226 (84.96%), Postives = 197/226 (87.17%), Query Frame = 3
Query: 171 KEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGV-------------------DPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLKWEGGRPRRVLDELMQGWRGW 791
++AFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIG D N+GFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEIS DDVRRATSKLQVLGSGF+VLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKL+WEGGRPRRVLDELMQ W
Sbjct: 5 RQAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGCERGRGKERDIARGVEGAKRDRDMHNRGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISTDDVRRATSKLQVLGSGFSVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLQWEGGRPRRVLDELMQEGMAW 230
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: A0A835YIN3_9STRA (EAP30/Vps36 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN3_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.670e-83 Identity = 147/246 (59.76%), Postives = 171/246 (69.51%), Query Frame = 3
Query: 120 MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIG----------------------VDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLKWEGGRPRRVLDELMQGWRGW 791
MRRRGVGV AVK + + K+AFE VG+ A EN++H+ + TFKG LE+FARKYKK INQDPAFRQQFQ MCASIG +DPLASNKGFWAEVLGVGDFYYELAVQI EVC+ATR NGGLMAL ELLQRLRA+ + KK IS DD++RA +KL+VLG GFA++E+GKT MV+SVPRELS+D SAVL AE SG + + L W R RR L L Q W
Sbjct: 1 MRRRGVGVAAVKHRAREKDAFEVVGQAAAAENMAHVQATLETFKGHLEDFARKYKKSINQDPAFRQQFQTMCASIGGMGKGRHGALREQCRPHNCASHLDPLASNKGFWAEVLGVGDFYYELAVQITEVCIATRETNGGLMALQELLQRLRARRS-KKSPAISLDDIKRAIAKLKVLGRGFALVEVGKTQMVLSVPRELSNDASAVLQAAEGSGHASVRALCVGLSWTQDRARRALTALAQDGMAW 245
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: W7TGH7_9STRA (EAP30 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGH7_9STRA) HSP 1 Score: 257 bits (656), Expect = 9.850e-79 Identity = 128/223 (57.40%), Postives = 175/223 (78.48%), Query Frame = 3
Query: 126 RRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAEAS-GRITEADISEKLKWEGGRPRRVLDELMQGWRGW 791
RRG GV ++KRKE+ KEAF ++GK + EEN++H++G+MATFK SLE+FARK+KKDIN +P R +F MCA IGVDPLASNKGFWA++LGVGDFYYELAVQI+E+CL TRS+NGGL+ L +L QR++ R+K +IS +D++ A +K+ +LG+GF++L+ GKTT+VVSVP ELSSDH+A+L +A+AS +T ++ +KL+W R R LD +MQ W
Sbjct: 2 RRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQ---KRRKVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAW 221
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: A0A7S2W3J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3J7_9STRA) HSP 1 Score: 236 bits (603), Expect = 9.530e-71 Identity = 117/228 (51.32%), Postives = 165/228 (72.37%), Query Frame = 3
Query: 111 GIAMRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAEA-SGRITEADISEKLKWEGGRPRRVLDELMQGWRGW 791
G MRRRGVGVG VK +EK E ++ +G + ++ + H + ++ F+ LE+FA KYK I DP FR++FQ MC IGVDPLASNKG W E+LGVGDFYYEL VQI+E+C+ TRS NGGL+++ +LL++LR NR RQE+S+DDV+R+ SKL+ LGSGF++L++G+TTMV+SVP EL+ DHSAVL +A+ +G++T + ++L W R R L+ ++ W
Sbjct: 4 GRRMRRRGVGVGRVKNREKQTEKYKQLGAELQDDRVKHATEVLGQFRTQLEDFAEKYKSSIRSDPVFRKEFQDMCMEIGVDPLASNKGLWGELLGVGDFYYELGVQIIEICIRTRSSNGGLISMRDLLRKLRKDSNRS-RQEVSSDDVKRSVSKLKKLGSGFSLLQVGRTTMVLSVPVELNRDHSAVLEVAQRHAGQVTLDGVQKELGWAEDRATRALERMVTEGMAW 230
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: A0A7S3Y4V3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4V3_HETAK) HSP 1 Score: 229 bits (585), Expect = 1.100e-68 Identity = 127/230 (55.22%), Postives = 158/230 (68.70%), Query Frame = 3
Query: 123 RRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQE------ISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLK-WEGGRPRRVLDELMQGWRGW 791
RRRGVGVGAVK+K++ +AFE VGKRVA+EN H++ ++ +FK +LEEFA KYKKDI DPAFRQQFQ MCA IGVDPLASNKGFWAE+LGVGDFYYELA+Q+ EVCLA R+ GGL+A+ ELL RL A+ + I+ DDVRRA KL+ LGSG+ ++ +G MV+SVP ELS D + L A A G E +E L W R R + L++ W
Sbjct: 3 RRRGVGVGAVKKKQQQAKAFEEVGKRVADENFQHVTSLLESFKTNLEEFAVKYKKDIRADPAFRQQFQTMCAKIGVDPLASNKGFWAEILGVGDFYYELALQVTEVCLARRAATGGLLAVGELLARLEARRIQAAAARDGGATAITRDDVRRAVGKLKALGSGYQLVHLGPHEMVLSVPLELSRDTTEALAAARARGG--ELRPAEDLPGWAPARVDRAVRTLLREGLAW 230
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: A0A8C3N4X4_GEOPR (Vacuolar-sorting protein SNF8 n=1 Tax=Geospiza parvula TaxID=87175 RepID=A0A8C3N4X4_GEOPR) HSP 1 Score: 228 bits (582), Expect = 5.290e-68 Identity = 120/226 (53.10%), Postives = 159/226 (70.35%), Query Frame = 3
Query: 120 MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLKWEGGRPRRVLDELMQGWRGWTA 797
M RRGVG GA+ R++ + ++ G +AE+ L+ +S + TF+ L+ FA K+K++I + P FR QFQ MCA+IGVDPLAS KGFWAEVLGVGDFYYEL VQI+EVCLA R NGGL+ L EL Q++ KG K Q++SADD+ RA KL+VLGSGF ++ +G T +V SVP ELS DH+ VL LAE G +T ++I + L WE R ++VLD L++ W A
Sbjct: 1 MHRRGVGAGAIARRKLTEAKYKERGTVLAEDQLAQMSKQLETFRTHLQAFASKHKQEIRRSPEFRLQFQHMCAAIGVDPLASGKGFWAEVLGVGDFYYELGVQIIEVCLALRHRNGGLITLEELQQQV-LKGRGKFAQDVSADDLLRAIRKLKVLGSGFGLIPVGGTVLVQSVPAELSMDHTVVLQLAEKKGFVTVSEIRDSLGWETERAKQVLDHLLKEGMAWLA 225
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: A0A067BX53_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BX53_SAPPC) HSP 1 Score: 228 bits (580), Expect = 1.120e-67 Identity = 118/220 (53.64%), Postives = 159/220 (72.27%), Query Frame = 3
Query: 120 MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLA-EASGRITEADISEKLKWEGGRPRRVLDELMQ 776
MRR +G+GAVK K++ K+A+E VG ++ + +L+H+ + FK +LE FA KYK I +DPAFR +FQVMC+ IGVDPLAS KGFW+E+L +GDFYYEL VQI+EVC+ TR NGGL+ + ELL RL K + Q IS DD++R+ KL+VLG GF V+E+G TM+V+VP ELS DHSA+LLLA E G +T A ++EKL W+ R L+ L++
Sbjct: 1 MRRGKMGIGAVKWKQEQKKAYEEVGTQLTQSHLAHVQAQLDVFKTNLEAFAVKYKAQIKKDPAFRMRFQVMCSKIGVDPLASQKGFWSELLDMGDFYYELGVQIIEVCILTRPKNGGLIPIHELL-RLLDKKRGLRMQRISEDDIKRSVKKLKVLGEGFQVIELGAKTMIVTVPVELSQDHSAILLLAQETQGMVTTALLAEKLLWDVNRSTIALNVLLR 219
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: A0A1S3IXU7_LINUN (Vacuolar-sorting protein SNF8 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IXU7_LINUN) HSP 1 Score: 227 bits (579), Expect = 1.430e-67 Identity = 120/224 (53.57%), Postives = 158/224 (70.54%), Query Frame = 3
Query: 120 MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLKWEGGRPRRVLDELMQGWRGW 791
MRRRG+G+GA+K K + F+ G +AE+ L+ +S + F+ LE+FA K+K DI +DP FR+ FQ MCA+IGVDPLAS KGFWAE+LGVGDFYYEL VQIVEVCLAT NGGLM L EL Q+L + ++K QEIS DD+ RA KL+VLG+GF V+ +G +V SVP ELS DH+AVL LAE +G ++ + I ++LKW R R +D +++ W
Sbjct: 1 MRRRGIGMGAIKNKNLAQARFKDKGSELAEDQLNQMSKQLDVFRTHLEDFAAKHKDDIRKDPQFRKHFQEMCATIGVDPLASGKGFWAEMLGVGDFYYELGVQIVEVCLATSHRNGGLMDLEELRQKLLSTRGKRK-QEISIDDLMRAIKKLKVLGNGFTVIPVGGRYLVQSVPGELSMDHTAVLQLAEDTGYVSMSMIRDRLKWGEERSHRAVDYMLKEGLAW 223
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Match: UPI001E1D413E (vacuolar-sorting protein SNF8-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D413E) HSP 1 Score: 227 bits (579), Expect = 1.520e-67 Identity = 113/219 (51.60%), Postives = 157/219 (71.69%), Query Frame = 3
Query: 120 MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLKWEGGRPRRVLDELMQ 776
MRRRG G+ A+K K + ++ G +AE+ + +S M TFK LE+F K+K +I +DP FR QFQ MCAS+GVDPLAS+KGFWAE+LGVGDFYYEL VQI+EVCLAT NGGL+++ EL ++L+ K KK Q++S DD+ RA KL+ LG+GF V+ +G T M+ SVP ELS DH+AV+ A++S +T++ +++ LKWE R R L+ L++
Sbjct: 1 MRRRGAGIAAIKNKNLAQAKYKDKGNEIAEDQFAQMSKQMETFKSHLEDFTAKHKDEIRKDPEFRAQFQEMCASVGVDPLASSKGFWAEMLGVGDFYYELGVQIIEVCLATSHRNGGLISIEELKEKLK-KSRSKKSQDVSYDDLLRAIKKLKALGNGFTVIPVGGTYMIQSVPGELSMDHTAVIQQAQSSAHVTKSKLTKDLKWEEERANRALNYLVK 218 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16115.1 >prot_E-siliculosus-1a_M_contig8.16115.1 ID=prot_E-siliculosus-1a_M_contig8.16115.1|Name=mRNA_E-siliculosus-1a_M_contig8.16115.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=314bp MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFback to top mRNA from alignment at E-siliculosus-1a_M_contig8:987003..992334+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16115.1 ID=mRNA_E-siliculosus-1a_M_contig8.16115.1|Name=mRNA_E-siliculosus-1a_M_contig8.16115.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5332bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:987003..992334+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:987003..992334+ >mRNA_E-siliculosus-1a_M_contig8.16115.1 ID=mRNA_E-siliculosus-1a_M_contig8.16115.1|Name=mRNA_E-siliculosus-1a_M_contig8.16115.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1884bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:987003..992334+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |