mRNA_E-siliculosus-1a_M_contig8.16099.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16099.1
Unique NamemRNA_E-siliculosus-1a_M_contig8.16099.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: D8LQI0_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI0_ECTSI)

HSP 1 Score: 731 bits (1887), Expect = 1.920e-261
Identity = 380/407 (93.37%), Postives = 386/407 (94.84%), Query Frame = 3
Query:   42 TLVGTRAFNILPQGKSPSRFQPVPPAXXXXXXXXXXXXXXXTGD--STHTKRRPRPGTLSASNAYGHASSRTADHDGDVPASLPRIDVTGLSRAQVAHLVDFSRSCILTGVLSSPDCESWCDGLLQDLGEATCAFQIRDNESGHSEEFEASLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQLFPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHGAATASWPTAGEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRDQIKEVLKVALVARHGREKGLEAFDGLDDP 1256
            TLV TRAFNILPQGKSP+RFQ   P XXXXXXXXXXXXXXX     S+H KRRPRPGTLSAS+A GHASSRT DHDGDVPASLPRIDVTGLSRAQVA LVDFSR CILTGVLSSPDCESWCDGLLQDLGE TCAFQIRDNESG SE FEASLMDFV+ LQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQ+LLGTDEFQLFPPSVRPQ+LCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHGAATASWPTAGEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALA RDQIKEVLKVALVARHG EKGLEAFDGLDDP
Sbjct:    2 TLVETRAFNILPQGKSPTRFQACAPXXXXXXXXXXXXXXXXXXAVFSSHAKRRPRPGTLSASSADGHASSRTVDHDGDVPASLPRIDVTGLSRAQVADLVDFSRPCILTGVLSSPDCESWCDGLLQDLGEETCAFQIRDNESGRSEVFEASLMDFVKRLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQDLLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHGAATASWPTAGEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALALRDQIKEVLKVALVARHGGEKGLEAFDGLDDP 408          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: A0A7S2R9P6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9P6_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.870e-55
Identity = 122/339 (35.99%), Postives = 172/339 (50.74%), Query Frame = 3
Query:  387 ESWCDGLLQDLGEATCAFQIRDNESGHSEEFEASLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQLFPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAF--GSHNVSAGWQSNVDLYQHGAA----TASWPTAG---------------------------------------EGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRD----QIKEVLKVALVARHGREKGLEAFDGLDDP 1256
            E+W     +   +       +D+ +G +   + SL  FV  L  +S H  S+YLLDE LL    + P L + L  P+   G D F LFP  ++P+  C ++GG G+RS LH+DPMEW GWN LLEG KLWTFLPP    +++LG+ R+    +  G +N+SAGWQS+VDLY    A    +  WP+A                                        +G+ +    ++ +Q  G+LV IPP  WHQ YHLEPS+AVA QY+  +   +V  H+  WC AS      S F  +A  +     I+E+L +AL A+HG+ KG E F  L  P
Sbjct:  117 EAWTAAFFEAFAQERVTCHTKDSTTGETTALDLSLSHFVD-LAFKSNHQHSYYLLDESLLS---SAPSLASSLTLPEAWFGKDHFGLFPAELQPKQPCLVMGGAGSRSSLHADPMEWTGWNYLLEGSKLWTFLPPGKGTETALGSRRVLSGEWDGGKYNISAGWQSDVDLYMEKIAGKGRSGDWPSAAALGVMPSIARDYALGLVEGSCNTGHPFMPSNAMVLDALVDGRSLEDGRIAVLQREGDLVHIPPGWWHQTYHLEPSVAVAGQYLSSQNFQKVAAHVCKWCDASIGDA-GSHFQQVADTEGYETAIQELLLLALRAQHGQAKGDELFSSLTFP 450          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: W7TWL4_9STRA (F-box protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWL4_9STRA)

HSP 1 Score: 172 bits (435), Expect = 4.580e-44
Identity = 124/372 (33.33%), Postives = 175/372 (47.04%), Query Frame = 3
Query:  285 PRIDVTGLSRAQVAHLVDFSRSCILTGVLSS-PDC-----ESWCDGLLQDLGEATCAFQIRDNES-GHSEEFEASLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGT-DEFQLFPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQS-NVDLYQ------HGAATASWPTAGEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASD--------------------------------DVLLSSRFDALAPRDQ----IKEVLKVALVARHGREKGLEAFDGL 1247
            P +D   L   Q          C+LT      P+      +++ D   ++  +     Q++ N        +  +L   V G+  +STH E+WYLL+E LL+  Q R ++      P +L G  D F LFP  +RP+  C I+GG GARSFLH DP EW G N LLEGRK+WTF PP +   + LG  R+ P A+    VSAGW+S + DLY        GA T   P      E +Q  V   QE GELV+IPP   HQVYHL+P L++A Q  +      V  HML W   S                                 +++     + +  R Q    I++ L+ A++ RHG E+GL+A++ L
Sbjct:   34 PCLDARDLPSQQALDAYIKKGPCVLTHAFDKDPNTRKMADDTFSDTFFEEFQDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQNR-KIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCS---ADLGLKRVLPEAW-EGEVSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQALV---QEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWAIESGGNLRHAQERPLHGGKAGLGQMEGTQEHVTRMVEIICQDTTEGVDERHQVMATIEKALRQAMILRHGPERGLQAYERL 397          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: A0A8J2SEA1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEA1_9STRA)

HSP 1 Score: 144 bits (364), Expect = 7.060e-35
Identity = 108/321 (33.64%), Postives = 147/321 (45.79%), Query Frame = 3
Query:  288 RIDVTGLSRAQVAHLVDFSRSCILTGVLSSPDCESWCDGLLQDLGEATCAFQIRDNESGHSEEFEASLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDE---FQLFPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLY--QHGAATASWPTAGEGQE-------------------VMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRDQIK 1178
            RID       + A  +D  +  +  G LS   C++W   L++  G+A    QI        + F+A L +F       STH    +L DE LL+       L A    PQ  +   E      FP   RP   C +  G GARS LH DP +W G ++ LEG K+W FL  + D D  L  Y+L   AFG    SAG QS++DLY  Q G     WP A + ++                   V     + +Q AG++V++PP+ WHQ Y LEPS AVASQ+   R    VF HM+      DD +L     A  PRD ++
Sbjct:   23 RIDAKDAPAIRAA--LDSGQPFVAAGALSPEACDAWTGNLMEGFGDAIVTQQIA------GDPFDAPLAEFFYDAL-ASTHETPHFLFDEALLE-----GNLRAAAIAPQRAIFEGEESWLDAFPAERRPADACVVCAGAGARSPLHRDPYDWTGTSLCLEGSKVWRFLLDVDDAD--LEAYKLPSEAFGDD--SAGTQSDIDLYCVQEG----DWPDAADFEDDRDLVKAKAGPENFTPSTQVPGRFCTALQFAGDVVIVPPKSWHQTYALEPSCAVASQFCGRRDAPTVFEHMIRHRSRDDDRVLDLARTA-PPRDAVR 320          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: F0YQV8_AURAN (Expressed protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQV8_AURAN)

HSP 1 Score: 139 bits (350), Expect = 2.640e-33
Identity = 102/280 (36.43%), Postives = 129/280 (46.07%), Query Frame = 3
Query:  285 PRIDVTGLSRAQVAHLVDFSRSCILTGVLSSPDCESWCDGLLQDLGEATCAFQIRDNESGHSEEFEASLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDE---FQLFPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHG---------------AATASWPTAGE-----GQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVAS 1055
            P   V     A +A  +D     I    LS+ DCE+W D L+  LG+A    Q R       E  E  L  F +     S+H    +L DE LLD      +L      PQ  +   E   F  FP S RP+  C +  G GARS LH DP +W G ++ +EG K+W F   +AD D  LG Y LA  AFG    SAG QS+ DLY                  A  A+W  A               V+ +Q AG++V++PPR WHQ Y LEPSLAVAS
Sbjct:   30 PAARVDARDHAAIAAALDAGEPFIAAEALSARDCEAWTDALMMRLGDAPVRRQRR------GEALEMPLGAFFEDALT-SSHALPSFLFDEFLLD---GDDDLRGAAVGPQRAIFGGERSWFDHFPESRRPRDGCVVGAGAGARSPLHRDPYDWTGTSLCVEGSKVWRFALDVADAD--LGAYELASEAFGGD--SAGTQSDADLYARRVGDGWPEPYAYDDDPALAATWSAAARFAPDVALPKTARFVTALQRAGDVVVVPPRAWHQTYALEPSLAVAS 295          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: A0A830HZM1_9CHLO (JmjC domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HZM1_9CHLO)

HSP 1 Score: 135 bits (340), Expect = 1.350e-31
Identity = 86/253 (33.99%), Postives = 125/253 (49.41%), Query Frame = 3
Query:  390 SWCDGLLQDLGEATCAFQIRDNESGHSEEFEASLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQLFPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVS--AGWQSNVDLYQHGAATASWPTAGEGQE---------VMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCG 1115
            SW   L+           +R+N   H+  F A  M+ +  +   S H+ S  +++E LL    A  +  A L  P+ +   ++    PPS+RP   C + GG G+RS LH+D   W+GWN L+EG K WTF+P  A   +     R+ P A+   N S  AGWQ+ VD Y   +A  +  TA  G +         +  H ++  Q  GELV+IPP  +HQVYH   ++A+A QY D      V RH+  W G
Sbjct:   52 SWLSDLVASAENTHVEVLLREN--NHTSSFVAPFMEALGEIAHASDHDSSVLIVEEDLLANSPAHVQDAARL--PKEICAENKLDQLPPSLRPG-TCVLFGGAGSRSSLHADAFGWVGWNYLVEGEKTWTFIPHDA-FPADEVCVRVPPAAWAGDNTSIGAGWQTAVDAYAERSADGTSFTARGGTQEHARAVEEAIQNHGITVHQSEGELVIIPPECFHQVYHHTATVAIAGQYADNTNWPIVCRHVGRWVG 298          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: A0A7S1WCY4_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WCY4_ALECA)

HSP 1 Score: 135 bits (340), Expect = 2.880e-31
Identity = 105/324 (32.41%), Postives = 153/324 (47.22%), Query Frame = 3
Query:  324 AHLVDFSRSCILTGVLSSP---DCESWCDGLLQDLGEATCAFQIRDNESGHSEEFEASLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQL--FPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSH--NVSAGWQSNVDLYQ------------HGAATASWPTAGEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCG--ASDDVLLSSRFDALAPRDQIKEVLKVALVARHGREKGLE 1232
            A  +D  +  +LT  L S    D  +W +G+L   G+   A+  R   +  + +  A L    Q L D S+H      +DEHLL+       L A+L +    +  D FQ   F   +R   +C   GG G RS  H+D ++W GWNVLL G KLW +     + D++    R+ P    +H   ++AGW+S  D Y             H       P A  G    +      Q AGE+V+ P   WHQVYH + ++A+ASQY + R+  R   H+L+WCG  A+   LL +R  + AP  QI E L++AL  R    +G E
Sbjct:    8 AERLDGRQPVLLTHALESRGRWDPRAWEEGVLGHYGQRVVAYSTRGRLT--TCQSYAPLSRAWQ-LVDGSSHARPVSYMDEHLLE----GEVLDAVLSRVPAFMRKDYFQEEGFKRHIRIPPVCFSRGGRGTRSDFHADFLDWTGWNVLLRGDKLWRWWRRRPEGDAAFAGVRV-PRLKEAHPEGLAAGWESRADAYAEVHGENPGPGRPHSFVPRPSPDAAPGAAWPEPDFETTQRAGEMVVFPGSWWHQVYHYDETVALASQYCNDRILARCLAHVLEWCGVGAAAVRLLLARLGSEAPEVQIDEALRLALATRLQPPEGAE 323          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: A0A835YWS3_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWS3_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.270e-31
Identity = 80/176 (45.45%), Postives = 99/176 (56.25%), Query Frame = 3
Query:  756 LEGRKLWTFLPPLADLDSSLGTYRLAPNAFG-SHNVSAGWQSNVDLYQ-------HGAATASWPTA---GEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQ-YMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRDQIKEVLKVALVARHGREKGLEAFDGL 1247
            +EG KLWTFLPP  +    L  YRL PNA+G S+NVSAGWQS VDLY+       HG+       A   G  ++V       VQ  GE VLIPPR WHQV HL PS+AVASQ Y   R R R+F+H+ DWCG            +  P+ Q++ VL+  L A+HG + G   F  L
Sbjct:    1 MEGEKLWTFLPPCPE--HLLDGYRLPPNAWGGSYNVSAGWQSPVDLYRPFSESGAHGSDGIMLSAAAAYGVPEDVWARRKQVVQREGETVLIPPRWWHQVIHLAPSIAVASQHYAGARGRRRIFQHIRDWCGCGGSAA-PPEIRSWPPQKQVEWVLQEGLCAKHGTDVGERLFKEL 173          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: A0A812KFH2_9DINO (PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812KFH2_9DINO)

HSP 1 Score: 127 bits (319), Expect = 7.220e-29
Identity = 80/227 (35.24%), Postives = 107/227 (47.14%), Query Frame = 3
Query:  489 LMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQLFPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHN-------VSAGWQSNVDLYQHGAATASWPTAGE--------GQEVMQHAVSG----VQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWC 1112
            L DFV      S H +   L+DE+++          +LLE     L  D F  FP  +RP  LC +VGG GARS LH DP+ W GWN LL+GRKLW F P   D+  +   +R     FG          + +GW+S+VDL+ +    A+ P            GQ       S     VQE GE ++ P   WHQ YHL P+   A Q ++     RV  H++ WC
Sbjct:   72 LCDFVPN----SYHEDPVLLMDENVVSTTSLA---NSLLEAAPPFLREDLFCEFPRMLRPAPLCLVVGGRGARSDLHIDPLSWTGWNCLLQGRKLWRFFP---DIPQNAEAFRPMSRPFGIRKGGAEVCTIGSGWRSDVDLFANRTHPAAEPLCDSFGSLSPDLGQFPHVKGCSAPLEHVQEPGETLIFPGHWWHQTYHLTPTFGFAGQVLNSGNLGRVLGHIIRWC 288          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Match: A0A812XB14_9DINO (PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812XB14_9DINO)

HSP 1 Score: 130 bits (327), Expect = 2.960e-28
Identity = 80/227 (35.24%), Postives = 107/227 (47.14%), Query Frame = 3
Query:  489 LMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQLFPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHN-------VSAGWQSNVDLYQHGAATASWPTAGE------GQEVMQHA------VSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWC 1112
            L DFV      S H +   L+DE+++          +LLE     L  D F  FP  +RP  LC +VGG GARS LH DP+ W GWN LL+GRKLW F P   D+      +R A   FG          + +GW+S+VDL+ +   TA+ P                H       +  VQE GE ++ P   WHQ YHL P+   A Q ++     RV  H++ WC
Sbjct:   72 LCDFVPN----SCHEDPVLLMDENVVSTTSLA---NSLLEAAPPFLREDLFCEFPLMLRPAQLCLVVGGQGARSDLHIDPLSWTGWNCLLQGRKLWRFFP---DIPQHAEAFRPASRPFGIRKGGAEVCTIGSGWRSDVDLFANRTNTAAEPPCDSFGWLSPDLAKFPHVKGCSAPLEHVQEPGETLIFPGHWWHQTYHLTPTFGFAGQVLNSGNLGRVLGHIIRWC 288          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LQI0_ECTSI1.920e-26193.37JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2R9P6_9STRA1.870e-5535.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TWL4_9STRA4.580e-4433.33F-box protein n=1 Tax=Nannochloropsis gaditana Tax... [more]
A0A8J2SEA1_9STRA7.060e-3533.64Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YQV8_AURAN2.640e-3336.43Expressed protein (Fragment) n=1 Tax=Aureococcus a... [more]
A0A830HZM1_9CHLO1.350e-3133.99JmjC domain-containing protein n=2 Tax=Pycnococcus... [more]
A0A7S1WCY4_ALECA2.880e-3132.41Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A835YWS3_9STRA3.270e-3145.45JmjC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A812KFH2_9DINO7.220e-2935.24PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=... [more]
A0A812XB14_9DINO2.960e-2835.24PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:816057..819227 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1257
Model size1866
Exons3
Ec32 orthologEc-10_005720.1
Ec32 ortholog descriptionJumonji domain protein
Hectar predicted targeting categorychloroplast
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2CZ69@1,2S8PH@2759
Seed eggNOG ortholog2880.D8LQI0
Seed ortholog evalue7e-210
Seed ortholog score736.5
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16099.1prot_E-siliculosus-1a_M_contig8.16099.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig8 816658..819219 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936172.558067-UTR-E-siliculosus-1a_M_contig8:816056..8166571622936172.558067-UTR-E-siliculosus-1a_M_contig8:816056..816657Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 816057..816657 -
1696250961.5044982-UTR-E-siliculosus-1a_M_contig8:816056..8166571696250961.5044982-UTR-E-siliculosus-1a_M_contig8:816056..816657Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 816057..816657 -
1622936172.623816-UTR-E-siliculosus-1a_M_contig8:819219..8192271622936172.623816-UTR-E-siliculosus-1a_M_contig8:819219..819227Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 819220..819227 -
1696250961.5506215-UTR-E-siliculosus-1a_M_contig8:819219..8192271696250961.5506215-UTR-E-siliculosus-1a_M_contig8:819219..819227Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 819220..819227 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936172.5730388-CDS-E-siliculosus-1a_M_contig8:816657..8169031622936172.5730388-CDS-E-siliculosus-1a_M_contig8:816657..816903Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 816658..816903 -
1696250961.5167036-CDS-E-siliculosus-1a_M_contig8:816657..8169031696250961.5167036-CDS-E-siliculosus-1a_M_contig8:816657..816903Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 816658..816903 -
1622936172.5866234-CDS-E-siliculosus-1a_M_contig8:817922..8184001622936172.5866234-CDS-E-siliculosus-1a_M_contig8:817922..818400Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 817923..818400 -
1696250961.528095-CDS-E-siliculosus-1a_M_contig8:817922..8184001696250961.528095-CDS-E-siliculosus-1a_M_contig8:817922..818400Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 817923..818400 -
1622936172.6016228-CDS-E-siliculosus-1a_M_contig8:818686..8192191622936172.6016228-CDS-E-siliculosus-1a_M_contig8:818686..819219Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 818687..819219 -
1696250961.5394828-CDS-E-siliculosus-1a_M_contig8:818686..8192191696250961.5394828-CDS-E-siliculosus-1a_M_contig8:818686..819219Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 818687..819219 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig8.16099.1

>prot_E-siliculosus-1a_M_contig8.16099.1 ID=prot_E-siliculosus-1a_M_contig8.16099.1|Name=mRNA_E-siliculosus-1a_M_contig8.16099.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=419bp
MLWLGVGLPLTTLVGTRAFNILPQGKSPSRFQPVPPAAAAAAVDSGARRR
RRTGDSTHTKRRPRPGTLSASNAYGHASSRTADHDGDVPASLPRIDVTGL
SRAQVAHLVDFSRSCILTGVLSSPDCESWCDGLLQDLGEATCAFQIRDNE
SGHSEEFEASLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLE
KPQNLLGTDEFQLFPPSVRPQHLCTIVGGVGARSFLHSDPMEWMGWNVLL
EGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHGAA
TASWPTAGEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQ
YMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRDQIKEVLKVALVAR
HGREKGLEAFDGLDDPYR*
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mRNA from alignment at E-siliculosus-1a_M_contig8:816057..819227-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig8.16099.1 ID=mRNA_E-siliculosus-1a_M_contig8.16099.1|Name=mRNA_E-siliculosus-1a_M_contig8.16099.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3171bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:816057..819227- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TGAAGACCATGCTGTGGCTAGGCGTAGGGCTGCCTCTTACGACCCTTGTG GGAACCCGGGCCTTCAACATACTGCCGCAGGGGAAGAGCCCGTCACGGTT TCAGCCTGTTCCTCCTGCGGCTGCTGCTGCTGCAGTCGACAGTGGTGCAA GGAGACGACGCCGAACCGGGGATAGCACGCACACGAAGAGAAGGCCTCGA CCAGGCACACTCTCCGCATCGAATGCTTATGGTCACGCTTCTTCGAGAAC AGCAGACCATGATGGCGATGTCCCGGCCTCGTTACCGCGAATAGACGTGA CCGGCCTCTCCCGAGCACAAGTGGCCCACCTTGTCGACTTCTCCCGGTCG TGCATCTTGACAGGAGTGCTTTCCTCGCCGGACTGCGAGTCGTGGTGCGA CGGGCTGCTGCAAGACTTGGGGGAGGCAACTTGTGCTTTTCAAATACGCG ACAACGAGAGCGGTCACAGCGAGGAGTTCGAGGCAAGCCTCATGGACTTT GTGCAAGGCTTACAGGACGAGAGCACACACAACGAGAGCTGGTGAGCAGG CGTTTGCTAGTAGCATAGGCTGGGCCACCGGAGGACTTCCATGCAAGGCC GCATTATTTTCTTCTGCCCTGTACCGATGGTTTTGGAAAGGCTGGAGATC GCACGTTATACCCAAGCGAGCCCCGTGCTCCGCCCGAAATTCCTAAGAGC AGAAACAACCAACGTTGCCGCGCACTCCTAACAATAGTGGACCACCTGGC TTGTGCGAGAAGACCTCTCCGTTCCGCCATTATGCCACCACGCACGCACC AAAACTCTCGTTCGCCTTGTGCGTCAGGTATCTGCTCGACGAGCACCTCC TCGACTTTCCACAAGCTCGCCCCGAACTCGGTGCCCTGCTCGAGAAGCCG CAGAACCTCCTTGGGACAGACGAGTTTCAGCTTTTCCCTCCTTCCGTCAG GCCCCAACACCTGTGTACCATCGTGGGCGGCGTGGGGGCGCGCTCGTTTC TCCACAGCGACCCCATGGAGTGGATGGGCTGGAACGTTCTTCTCGAGGGC CGGAAGCTATGGACGTTCCTGCCTCCATTGGCCGACCTGGATTCCTCTCT TGGAACCTACCGCTTGGCCCCTAATGCCTTCGGCTCCCACAACGTCTCGG CGGGATGGCAGAGCAACGTGGACCTCTACCAGCACGGAGCGGCCACGGCG TCTTGGCCGACAGCGGGAGAGGGGCAAGAGGTCATGCAGCACGCTGTTAG TGGAGTACAGGAGGCGGGGGAACTTGTTCTTATACCGCCTCGTCATTGGC ACCAGGTATGTGTGGGCAAGCGAAGGCCTCGCTTGTGGGTGTGATTTGTA TGCATGTGTGGAACATACCCGTGCTATCTCCAGACATGTTGTTAGACGTA TGACACAACGAGATGGGGAGTGGTGAATATTCGGTACGCACGGCAATGAG CTTCGATTCGGTTGTCGGGATGTGGTCCGTTCAGAATTGTTGTCGGTTTC ATCCCGGGCGCTGATATGTAGCCGAGTGAGAAGTCTCATCCCGCGTTTGG CAGCAAACGCGAAACTCCAAACACTTACAATATCACTGTAGAGTAAACAC ATCAGCATCGGAGCCCGTGGTTTCTTCGCGGGCGTCTGGTACAAATAAAA CGATCTCAGCGTGCTGCTGCTGTTGGTTGGGCCCTGTTCCATGCTGCTAC AGTTCGCGCATGAACAACCTTGTTACTTCGAACCCTTGTGTTTTCCTCTG TAGGTTGCCAGAATTGCTGAACGTGGATGTTCACACACACCAGCTGTTGC TGCGTTTGGATGCAGCCAATGTCTTCGGTCTCAACGATTGCTGTGGACCA CGTCAATCCCTTCATATCTCATAGCATATAAGCTGGCGTCAACGGCAGTA AATAGACAAGTCATGTCCTGCGTCAATGCTTGCCGCTACAGGAAACAACT CAATCGATTCACCATTGGTGAATAGTCGTGCCAAATTGAATTGTGAACAT TTGATACATGGTTGTAACAGAGAACTCAAACAGCAGTGTTACCGACCAAT AACCGGTGGATCTGACGAAATATTTATGCAGAATATCGATGGTTGGCAGC TGGGATGGCTGTACGGGAAGATCAAACGGCAAATAGCCAACGTACCTCGC TTTTTTTTCCAGTATACATTTTTCGGGGTAAGTTAGCCTGTGACCACGGG AATCGACCGCGTCAATAGTTAGATCAGGTCAGCACGGATAGGGAGATCGG AACGGTTGGTTAAAGTGAAGGCAACAACAACAACCTCGCACCCACTTTTT CATTTCATCTGCTGTGATCATTAGGTGTACCACCTCGAGCCGTCATTGGC AGTCGCGTCGCAGTACATGGACTTTCGGGTACGAGATCGCGTGTTCCGAC ACATGCTGGACTGGTGCGGGGCTTCCGACGACGTGCTTCTATCCTCCCGG TTCGACGCTCTGGCGCCTCGCGACCAGATCAAGGAGGTGCTGAAGGTGGC GCTCGTAGCACGTCACGGCCGAGAAAAGGGCCTGGAAGCCTTCGATGGCC TCGACGACCCATATCGTTGAACGGGACCAATCTTGTTGTTCGACTTCGTG GCGAAATGCCCGAGATTTTCCTATTGGTCAACCTCGTTGATGCTACATTA TTATTGGCCGATAGTCCTGGTGTAGCGGCAGCCACGGGGTCGGCTCCTGA GCTCGTTTTTCTATGAGGTTCATTCTTTTCTCCTCGTTTGATTGATCGAT CTCACGGGTATGAGGGCCCTCCTCTGCTTTCCAGAGGGGAGGCGGGAACT CTCACGCGGTTTCGTGACCTGTGTACTACTTTCCTTGCGGATGGATCCAA GAATAGCCAAGAATAGCCAAGAACGAACCAGCAGGTTTGGCTGTTTCTCC GGATGTGTTTGTCCGATGTTGTACATATCCTTCCACAGCAGCAGTATACT AGACAGGAATATCCACGCGCACTGGTATGTGATGATCTGCTTCCTATTAG CGCCTGTTTTGTCGCGGTTGATTGTATGACGGCTCGATTTCAAGTGTCGT GTGTCACAGCCCTGCCACCATGCAGTCTGCATGCCAACAGATCAGCGTTG ATGGACGGGAGAGCGTGCATTCTCGGCTGGTGGTGATGAAAGCATTGATG GTTAAGCAAGCAGGTGATGCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:816057..819227-

>mRNA_E-siliculosus-1a_M_contig8.16099.1 ID=mRNA_E-siliculosus-1a_M_contig8.16099.1|Name=mRNA_E-siliculosus-1a_M_contig8.16099.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2514bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:816057..819227- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCTGTGGCTAGGCGTAGGGCTGCCTCTTACGACCCTTGTGGGAACCCG
GGCCTTCAACATACTGCCGCAGGGGAAGAGCCCGTCACGGTTTCAGCCTG
TTCCTCCTGCGGCTGCTGCTGCTGCAGTCGACAGTGGTGCAAGGAGACGA
CGCCGAACCGGGGATAGCACGCACACGAAGAGAAGGCCTCGACCAGGCAC
ACTCTCCGCATCGAATGCTTATGGTCACGCTTCTTCGAGAACAGCAGACC
ATGATGGCGATGTCCCGGCCTCGTTACCGCGAATAGACGTGACCGGCCTC
TCCCGAGCACAAGTGGCCCACCTTGTCGACTTCTCCCGGTCGTGCATCTT
GACAGGAGTGCTTTCCTCGCCGGACTGCGAGTCGTGGTGCGACGGGCTGC
TGCAAGACTTGGGGGAGGCAACTTGTGCTTTTCAAATACGCGACAACGAG
AGCGGTCACAGCGAGGAGTTCGAGGCAAGCCTCATGGACTTTGTGCAAGG
CTTACAGGACGAGAGCACACACAACGAGAGCTGATGCTGTGGCTAGGCGT
AGGGCTGCCTCTTACGACCCTTGTGGGAACCCGGGCCTTCAACATACTGC
CGCAGGGGAAGAGCCCGTCACGGTTTCAGCCTGTTCCTCCTGCGGCTGCT
GCTGCTGCAGTCGACAGTGGTGCAAGGAGACGACGCCGAACCGGGGATAG
CACGCACACGAAGAGAAGGCCTCGACCAGGCACACTCTCCGCATCGAATG
CTTATGGTCACGCTTCTTCGAGAACAGCAGACCATGATGGCGATGTCCCG
GCCTCGTTACCGCGAATAGACGTGACCGGCCTCTCCCGAGCACAAGTGGC
CCACCTTGTCGACTTCTCCCGGTCGTGCATCTTGACAGGAGTGCTTTCCT
CGCCGGACTGCGAGTCGTGGTGCGACGGGCTGCTGCAAGACTTGGGGGAG
GCAACTTGTGCTTTTCAAATACGCGACAACGAGAGCGGTCACAGCGAGGA
GTTCGAGGCAAGCCTCATGGACTTTGTGCAAGGCTTACAGGACGAGAGCA
CACACAACGAGAGCTGGTATCTGCTCGACGAGCACCTCCTCGACTTTCCA
CAAGCTCGCCCCGAACTCGGTGCCCTGCTCGAGAAGCCGCAGAACCTCCT
TGGGACAGACGAGTTTCAGCTTTTCCCTCCTTCCGTCAGGCCCCAACACC
TGTGTACCATCGTGGGCGGCGTGGGGGCGCGCTCGTTTCTCCACAGCGAC
CCCATGGAGTGGATGGGCTGGAACGTTCTTCTCGAGGGCCGGAAGCTATG
GACGTTCCTGCCTCCATTGGCCGACCTGGATTCCTCTCTTGGAACCTACC
GCTTGGCCCCTAATGCCTTCGGCTCCCACAACGTCTCGGCGGGATGGCAG
AGCAACGTGGACCTCTACCAGCACGGAGCGGCCACGGCGTCTTGGCCGAC
AGCGGGAGAGGGGCAAGAGGTCATGCAGCACGCTGTTAGTGGAGTACAGG
AGGCGGGGGAACTTGTTCTTATACCGCCTCGTCATTGGCACCAGGTATCT
GCTCGACGAGCACCTCCTCGACTTTCCACAAGCTCGCCCCGAACTCGGTG
CCCTGCTCGAGAAGCCGCAGAACCTCCTTGGGACAGACGAGTTTCAGCTT
TTCCCTCCTTCCGTCAGGCCCCAACACCTGTGTACCATCGTGGGCGGCGT
GGGGGCGCGCTCGTTTCTCCACAGCGACCCCATGGAGTGGATGGGCTGGA
ACGTTCTTCTCGAGGGCCGGAAGCTATGGACGTTCCTGCCTCCATTGGCC
GACCTGGATTCCTCTCTTGGAACCTACCGCTTGGCCCCTAATGCCTTCGG
CTCCCACAACGTCTCGGCGGGATGGCAGAGCAACGTGGACCTCTACCAGC
ACGGAGCGGCCACGGCGTCTTGGCCGACAGCGGGAGAGGGGCAAGAGGTC
ATGCAGCACGCTGTTAGTGGAGTACAGGAGGCGGGGGAACTTGTTCTTAT
ACCGCCTCGTCATTGGCACCAGGTGTACCACCTCGAGCCGTCATTGGCAG
TCGCGTCGCAGTACATGGACTTTCGGGTACGAGATCGCGTGTTCCGACAC
ATGCTGGACTGGTGCGGGGCTTCCGACGACGTGCTTCTATCCTCCCGGTT
CGACGCTCTGGCGCCTCGCGACCAGATCAAGGAGGTGCTGAAGGTGGCGC
TCGTAGCACGTCACGGCCGAGAAAAGGGCCTGGAAGCCTTCGATGGCCTC
GACGACCCATATCGTTGAGTGTACCACCTCGAGCCGTCATTGGCAGTCGC
GTCGCAGTACATGGACTTTCGGGTACGAGATCGCGTGTTCCGACACATGC
TGGACTGGTGCGGGGCTTCCGACGACGTGCTTCTATCCTCCCGGTTCGAC
GCTCTGGCGCCTCGCGACCAGATCAAGGAGGTGCTGAAGGTGGCGCTCGT
AGCACGTCACGGCCGAGAAAAGGGCCTGGAAGCCTTCGATGGCCTCGACG
ACCCATATCGTTGA
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