mRNA_E-siliculosus-1a_M_contig8.16078.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: D8LQK8_ECTSI (Pyridoxal 5'-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQK8_ECTSI) HSP 1 Score: 522 bits (1345), Expect = 7.890e-181 Identity = 248/255 (97.25%), Postives = 249/255 (97.65%), Query Frame = 1
Query: 61 MAFRPLSRHSTRKRTLSAPAGSQSSSAPPDLANLREHYVSTGIDRATLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
MA RPL RHSTRKRTLSA GSQSSSAPPDLANLREHYVSTGIDRATLP EPHILM KWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRF+YSLASDDADGAGGEDAKAMPWTITRLQP
Sbjct: 1 MALRPLGRHSTRKRTLSATTGSQSSSAPPDLANLREHYVSTGIDRATLPSEPHILMVKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFMYSLASDDADGAGGEDAKAMPWTITRLQP 255
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: A0A0G4EI35_VITBC (Pyridoxal 5'-phosphate synthase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EI35_VITBC) HSP 1 Score: 244 bits (623), Expect = 2.420e-72 Identity = 133/276 (48.19%), Postives = 171/276 (61.96%), Query Frame = 1
Query: 28 VAMLCTIRIGVMAFRPLSRH---STRKRTLSAPAGSQSSSAPPDLAN-------LREHYVSTGIDRATLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
V + I+ V+A RP R T++ +LS P SS A L+N LR+ Y G+D A++P +P L +W E+A +EPNAMCL+T + G+PSARFVL+KGYDERG +YTNY SRK +EL P A++TFWW AL RS+R EG V V EESD YF RP S++GA SDQS PIASRE + K E+E + + +PRP HWGGFRL PSR+EFW+G+ SRLHDR VY+ + +G GGE W I R+QP
Sbjct: 6 VLVALIIQSMVVALRPSLRRIFSKTKQISLSPPPRFMSS-ANGLLSNNLERISALRKEYSMKGLDEASMPADPLTLFGEWFEDAKTVS--VEPNAMCLSTASKEGRPSARFVLLKGYDERGFVFYTNYESRKGKELTENPFASLTFWWEALERSIRIEGRVQQVPPEESDAYFTSRPKASRLGAIASDQSRPIASREALEAKWSELEGRYEGTAE-VPRPLHWGGFRLVPSRIEFWKGRESRLHDRLVYTRGEGEGEG-GGE------WRIERMQP 270
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: A0A836CLR6_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR6_9STRA) HSP 1 Score: 242 bits (617), Expect = 5.190e-72 Identity = 119/228 (52.19%), Postives = 155/228 (67.98%), Query Frame = 1
Query: 151 LANLREHYVSTGIDRATLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYD-ERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASE--GDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
L +LRE Y + ++ P +P L W+ +A R + +PNAMCLAT G+PS+RFVL+KG D + G +YTNY SRK++EL+A P AA TFWW LHRSVR EG VA VS ESDTY+ RP GS++GAWVSDQS+P+A R+ M K +EVE F ++ ++PRPPHWGG+R+ P R+EFW G+PSRLHDR VY+ +S+ G GG WT+ RLQP
Sbjct: 13 LPDLREEYRADPLEEGCAPGDPMELFQTWLADATRAG-LQDPNAMCLATATPEGRPSSRFVLLKGCDADGGFVFYTNYGSRKARELEANPFAAATFWWAPLHRSVRVEGAVARVSAAESDTYYASRPRGSRLGAWVSDQSQPVAGRDAMDAKQQEVEARFGADDAAGDVPRPPHWGGYRVVPDRIEFWGGRPSRLHDRLVYTRSSEGG-GNGG-------WTMQRLQP 231
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: A0A7S2XW57_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW57_9STRA) HSP 1 Score: 238 bits (607), Expect = 9.750e-70 Identity = 116/227 (51.10%), Postives = 149/227 (65.64%), Query Frame = 1
Query: 151 LANLREHYVST-GIDRATLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGE-GGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
LA+ RE Y G+D + + P+ L +W ++A K V+EPNAMCL+T G+PS+R+VL+KG+DERG WYTNY SRK QEL A P A++ FWWG LHRSVR EG+V VS EESD YF RP GS++GA VS QS P+ SR E+ K +E+ +A ++ RPPHWGGFRL RVEFW G+ SRLHDR VY+ D +++ W+I RLQP
Sbjct: 74 LADFREEYSKDEGLDESMVSSTPYPLFQRWFDDAKNAK-VVEPNAMCLSTTEPTNGRPSSRYVLLKGFDERGWVWYTNYESRKGQELSANPWASLVFWWGDLHRSVRIEGKVEKVSAEESDEYFYSRPVGSQLGAMVSTQSRPVQSRSELEAKFQELTEAAEKNPSSVVRPPHWGGFRLAADRVEFWHGRSSRLHDRLVYTRP----------DFESVTWSIERLQP 289
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: A0A482SL99_9ARCH (Pyridoxamine 5'-phosphate oxidase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL99_9ARCH) HSP 1 Score: 236 bits (603), Expect = 1.280e-69 Identity = 122/243 (50.21%), Postives = 155/243 (63.79%), Query Frame = 1
Query: 103 TLSAPAGSQSSSAPPDLANLREHYVSTGI--DRATLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
TL+ P+ + S+ P LA+LR+ Y S G+ + + P L W+ +A + VIEPNAMCL+T + KPSARFVL+KG+DERG WYTNY SRK QEL PHAA+TFWWG L RSVR EG+V VS ESD YFN RP GS+IGAW S+QS I +R + + + V + F EG +PRPPHWGGFRL P R+EFW+G+ SRLHDR V+ + + W + RLQP
Sbjct: 29 TLAKPSTTASAERP--LADLRKEYSSRGLVEENVVISNGPFELFEAWLNDAVAAR-VIEPNAMCLSTCVDN-KPSARFVLLKGFDERGFVWYTNYESRKGQELVDNPHAALTFWWGELERSVRIEGKVERVSSAESDEYFNSRPRGSQIGAWTSNQSRAIENRAILEEQERIVAERFGKEGP-VPRPPHWGGFRLIPHRIEFWKGRASRLHDRLVFERS-----------CLSSAWALERLQP 255
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: A0A7S3MCE8_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCE8_9STRA) HSP 1 Score: 232 bits (592), Expect = 8.100e-68 Identity = 125/260 (48.08%), Postives = 157/260 (60.38%), Query Frame = 1
Query: 52 IGVMAFRPLSRHSTRKRTLSAPAGSQSSSAPPDLANLREHYVSTGIDRA--TLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
+G L R R+R P + + A +A+ R+ Y + G++ +L P L KW +EA R K V+EPNAMCLAT PSAR VLMKG+DERGV W+TNYNS+K +L A P AA TFWWG L RSVR EG V VS EESD YF+ RP GS+IGAW S+QS I SR E+ + V+ F E +PRPPHWGGFRL P+++EFW+G+ SR+HDR V++ S DA W RLQP
Sbjct: 24 VGAKLSHTLVRQLARRRFSEIPVAGKET-AINSVADFRKEYSAQGLEDGDDSLRLGPVKLFTKWFDEAVRTK-VLEPNAMCLATCSNN-IPSARVVLMKGFDERGVVWFTNYNSKKGADLLANPVAAATFWWGELERSVRVEGRVEKVSAEESDEYFHSRPRGSQIGAWSSNQSHVINSRAELDEHERMVQARFQDESVQVPRPPHWGGFRLVPTKIEFWKGRKSRMHDRIVFTRESADA-----------AWNQIRLQP 269
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: A0A4D9D582_9STRA (Pyridoxal 5'-phosphate synthase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D582_9STRA) HSP 1 Score: 230 bits (586), Expect = 2.840e-67 Identity = 117/252 (46.43%), Postives = 148/252 (58.73%), Query Frame = 1
Query: 151 LANLREHYVSTGIDRATLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFP----------------------HAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDN-----IPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
+A+LR+ Y ++G+ +P EP + +W++EA +V+EPNAMCL+TV GKPS RFVL+KG D+RG TW+TNY SRK +L P AA+TFWWG L RSVR EG V +SEE S YF+ RP GS+IGAW S+QS PI SR ++ + V F E N IP+P WGGFRL P RVEFW+G+ SRLHDR VY+L ED W +TRLQP
Sbjct: 4 VADLRKEYSASGLVEENMPSEPLSVFRQWLDEAVAA-QVLEPNAMCLSTVSSDGKPSGRFVLLKGLDDRGFTWFTNYQSRKGHDLAGAPVAPALTSSAXXXXXXXXXXXXXFAALTFWWGDLERSVRVEGWVERLSEEASQAYFDSRPRGSRIGAWASEQSRPIGSRYDLESQYASVSARFGGEEGNDSAHPIPKPAQWGGFRLVPERVEFWKGRQSRLHDRLVYTLE---------EDKVGRAWRLTRLQP 245
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: UPI0004DF3851 (pyridoxamine 5'-phosphate oxidase n=1 Tax=Thiomonas sp. FB-Cd TaxID=1158292 RepID=UPI0004DF3851) HSP 1 Score: 228 bits (580), Expect = 7.350e-67 Identity = 114/225 (50.67%), Postives = 140/225 (62.22%), Query Frame = 1
Query: 151 LANLREHYVSTGIDRATLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
LA+LR+ Y +D A +P L +W+ EA + +V EPNAM +ATVGEGG+PS R VL+KG+D RG+ WY+NY+SRK +EL A P AA+ F W L R VR EG V VS EESD YF RP S+IGAW S+QS+PI R + +A E F G N PRPPHWGG+RL P EFW+G+PSRLHDR VY SD A W + RL P
Sbjct: 4 LAHLRKDYTRAELDEAHAQADPMALFERWMHEAVQA-QVPEPNAMTVATVGEGGRPSTRVVLIKGFDARGIVWYSNYHSRKGRELAAHPFAALQFHWVELERVVRIEGRVEQVSAEESDAYFASRPLASRIGAWASEQSQPIEGRSVLIKRAAEFGLKF---GLNPPRPPHWGGYRLMPDAWEFWQGRPSRLHDRLVYQRRSDGA------------WQLQRLAP 212
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: A0A510HIA5_9ACTN (Pyridoxine/pyridoxamine 5'-phosphate oxidase n=2 Tax=Rubrobacter xylanophilus TaxID=49319 RepID=A0A510HIA5_9ACTN) HSP 1 Score: 228 bits (580), Expect = 9.850e-67 Identity = 113/226 (50.00%), Postives = 144/226 (63.72%), Query Frame = 1
Query: 148 DLANLREHYVSTGIDRATLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
DLA LR+ Y G+ A +P +W +EA + EPNAM LAT G+PSAR VL+KG+DERG +YTNY RK++EL+A P AA+ F+WG L R VR EG V+ EESD YF RP GS++GAW S QSEP+ASREE+ + +EVE F EG +PRPP WGG+R++P R+EFW+G+ SRLHDR +Y +GAG W RLQP
Sbjct: 12 DLAGLRQEYTRAGLSEADADPDPLRQFGRWFDEALAAG-LHEPNAMILATATSDGRPSARTVLLKGFDERGFVFYTNYGGRKARELEANPRAALLFYWGELERQVRIEGIATRVAREESDAYFASRPRGSQLGAWASRQSEPVASREELERRLREVERRF--EGRPVPRPPFWGGYRVRPERIEFWQGRESRLHDRLLYVR-----EGAG--------WRRVRLQP 221
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Match: A0A0J7JR35_9BURK (Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Candidatus Burkholderia pumila TaxID=1090375 RepID=A0A0J7JR35_9BURK) HSP 1 Score: 227 bits (578), Expect = 1.490e-66 Identity = 114/225 (50.67%), Postives = 145/225 (64.44%), Query Frame = 1
Query: 151 LANLREHYVSTGIDRATLPREPHILMAKWVEEACRCKEVIEPNAMCLATVGEGGKPSARFVLMKGYDERGVTWYTNYNSRKSQELKAFPHAAITFWWGALHRSVRFEGEVAMVSEEESDTYFNCRPTGSKIGAWVSDQSEPIASREEMTLKAKEVEDAFASEGDNIPRPPHWGGFRLKPSRVEFWEGQPSRLHDRFVYSLASDDADGAGGEDAKAMPWTITRLQP 825
LA+LR++Y + +D A + P W +A ++ EPNAM LATV G+PSAR VL+KG DERG ++TNY+SRK +EL P A++ F W L R VR EG V S ESDTY+ RP GS+IGAW SDQS PIA+RE + L+ KE+ + + GD +PRPPHWGG+RL P +EFW+G+PSRLHDR VY AS G+D PW ITRL P
Sbjct: 4 LADLRKNYSRSSLDAADVDSNPICQFETWFAQALDA-QLPEPNAMTLATVDTNGRPSARIVLIKGVDERGFAFFTNYDSRKGRELAENPAASLLFHWIELERQVRIEGRVVKTSALESDTYYASRPLGSRIGAWASDQSRPIANREMLELRKKEISEKY---GDQLPRPPHWGGYRLVPDVLEFWQGRPSRLHDRIVYKRAS-------GDD----PWQITRLAP 213 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16078.1 >prot_E-siliculosus-1a_M_contig8.16078.1 ID=prot_E-siliculosus-1a_M_contig8.16078.1|Name=mRNA_E-siliculosus-1a_M_contig8.16078.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=265bp MLCTIRIGVMAFRPLSRHSTRKRTLSAPAGSQSSSAPPDLANLREHYVSTback to top mRNA from alignment at E-siliculosus-1a_M_contig8:488846..496183+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16078.1 ID=mRNA_E-siliculosus-1a_M_contig8.16078.1|Name=mRNA_E-siliculosus-1a_M_contig8.16078.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7338bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:488846..496183+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:488846..496183+ >mRNA_E-siliculosus-1a_M_contig8.16078.1 ID=mRNA_E-siliculosus-1a_M_contig8.16078.1|Name=mRNA_E-siliculosus-1a_M_contig8.16078.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1590bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:488846..496183+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |