mRNA_E-siliculosus-1a_M_contig8.16073.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: D8LQL2_ECTSI (Similar to putative transmembrane protein 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL2_ECTSI) HSP 1 Score: 385 bits (989), Expect = 4.940e-135 Identity = 196/203 (96.55%), Postives = 198/203 (97.54%), Query Frame = 1
Query: 1 MFRRRGGAGYRRLRVAATGSTHDDVGETYRENPSADRSRYASEISSSLSLQIIIYYNGLLSLIYFVLGGGLVIEKLCNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEEYLLRPVSEEHARLL 609
MFRRRGGAGY+RLRVAAT STH DVG TYRENPSADRSRYASEISSSLSLQI+IYYNGLLSLIYFVLGGGLVIEKL NYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEEYLLRP SEEHARLL
Sbjct: 1 MFRRRGGAGYQRLRVAATDSTHHDVGVTYRENPSADRSRYASEISSSLSLQILIYYNGLLSLIYFVLGGGLVIEKLYNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEEYLLRPASEEHARLL 203
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: A0A836CA77_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA77_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.870e-48 Identity = 80/151 (52.98%), Postives = 104/151 (68.87%), Query Frame = 1
Query: 115 RYASEISSSLSLQIIIYYNGLLSLIYFVLGGGLVIEKLCNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEE 567
RY SE SSSL Q+++Y+N + S+IYF++ G LVI K+ Y F+S LQR V AP F+ WA+ EV R YFGY GNI+EMVP M AF+LMTVFPQ + +L FQE FP D +G +A LA+ET+ G +++I KRTAQF R+ Q E
Sbjct: 1 RYQSETSSSLPAQVLMYFNVMFSIIYFIMEGSLVIMKMSQYVFDSPLQRIVCAPAFMIWALVEVFRLYFGYSGNIEEMVPQMTAFVLMTVFPQSLVVLYLTTFQEFVFPADAAMGGTMLALLAAETVAGAGAVRSIARKRTAQFHRMVQTE 151
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: A0A7S2V551_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V551_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.040e-37 Identity = 64/148 (43.24%), Postives = 101/148 (68.24%), Query Frame = 1
Query: 130 ISSSLSLQIIIYYNGLLSLIYFVLGGGLVIEKLCNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEEYL 573
++SS+SL I++Y + ++S++YF LGG L++ KL ++ F S L + +L P FI I + RFYFG++GN+KE VP + AFL++T FP F +A++ F QE +P D ++G + I + E GY +K +IN++TA+FFR+ QEE L
Sbjct: 34 VASSVSLHILLYLDSMVSIVYFFLGGSLILHKLSSFDFVSPLHQLLLIPCFIILLICDTSRFYFGFQGNLKERVPQVIAFLMITFFPTFFVMAYMTFVQEVLYPFDVVIGWMFIMLMLLEFYFGYRCVKRLINRQTARFFRLCQEEEL 181
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: A0A8J2SKP3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKP3_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.200e-37 Identity = 69/151 (45.70%), Postives = 96/151 (63.58%), Query Frame = 1
Query: 127 EISSSLSLQIIIYYNGLLSLIYFVLGGGLVIEKLCNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEEYLLR 579
EI SSL LQ +I+Y G+ SL+YF + GG ++ KL NY+F++ + + PIF W E+ R GY GN+ E VP + AFLL+T+FPQ+ + FL F Q+ FP D G++ I FL SE VG K +I ++TAQFFR+ QEE + R
Sbjct: 11 EIKSSLGLQQVIFYQGMFSLLYFAICGGCLLNKLQNYKFQNSILFILTLPIFSLWCCIEIVRIGLGYIGNLLEKVPMISAFLLLTIFPQLVAILFLTFLQDPVFPFDTAAGSMMILFLLSELYVGRLTFKTLIERQTAQFFRLCQEEEMER 161
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: A0A7S2R395_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R395_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.090e-31 Identity = 62/164 (37.80%), Postives = 99/164 (60.37%), Query Frame = 1
Query: 73 VGETYRENPSADRSRYASEISSSLSLQIIIYYNGLLSLIYFVLGGGLVIEKLCNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQE 564
VG T+ R E +S+ LQI ++YN LSL++FV+ L+ KL + F S+L R + P F W++A+ R ++GY GN+ E VPH AF L+TVFPQ+ + FL F QEH +P++ ILG+I + FL +E G + ++ ++ K+ + F+R+ +
Sbjct: 1 VGSTHFPLAIMARRLATEEAIASVPLQICLFYNMFLSLLFFVMEACLLAYKLQEFEFVSQLYRAFVIPCFFFWSLADPPRLFYGYSGNLTEQVPHSSAFFLITVFPQVPGVLFLTFAQEHSYPIERILGSIVLIFLFAEIYFGSSALRRLMAKQMSHFYRLQNQ 164
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: F0YGR8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGR8_AURAN) HSP 1 Score: 117 bits (292), Expect = 5.960e-30 Identity = 57/132 (43.18%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 184 LIYFVLGGGLVIEKLCNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEEYLLR 579
++YFV+ GG ++ K+ NY F++ + + + PIF+ W+ E+ R GY GNIKE VP + AFLL+T+FPQ+ + F A Q+ FP D G+I I +L E VG +K +I ++TAQFFR+ QEE + R
Sbjct: 1 MLYFVVCGGCLLNKIYNYEFQNGILKILTLPIFLLWSCTELARVALGYIGNIKERVPMISAFLLLTMFPQVVAVFFFAILQDPVFPFDRAAGSIMIFYLVIELFVGRFTLKTLIQRQTAQFFRLCQEEEIRR 132
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: A0A0H5RTX2_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RTX2_9EUKA) HSP 1 Score: 88.2 bits (217), Expect = 2.880e-18 Identity = 48/141 (34.04%), Postives = 81/141 (57.45%), Query Frame = 1
Query: 127 EISSSLSLQIIIYYNGLLSLIYFVLGGGLVIEKLCNYRFESELQRTVLAPIFIS-WAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQF 546
++SSSLSLQI++YYN S +Y V+ + K+ Y+ + + +VL PI + W + E R Y GN++E + H+ AF +T+FPQ F + ++ Q+H + +I I FL +E I+GY+ I+ I+ + +F
Sbjct: 34 QMSSSLSLQILLYYNVWYSGLYAVVNILITSFKISKYKDDQFV--SVLTPILLGIWCLVEPCRLALAYAGNLQERIQHLAAFFFLTLFPQAFLVVYVLAIQKHVLTGETTSASIQIGFLVAELIIGYHTIQYIVKIQATRF 172
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: A0A812PWT7_9DINO (Tmem17a protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812PWT7_9DINO) HSP 1 Score: 82.0 bits (201), Expect = 6.230e-16 Identity = 37/101 (36.63%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 268 LAPIFIS-WAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEE 567
+ PIF W + E R + G+ GN++E VP + AF+L+TVFPQ+ + L F + P D + A + FL E +V + ++A++ K+TA+FFR Q +
Sbjct: 13 IVPIFSGIWVLVEAIRLWLGFSGNLRERVPELAAFVLLTVFPQIPIMLLLGFIAVDRVPADAVTAAPQLVFLLLEAVVSFRTVRALMRKQTAEFFRACQTD 113
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: A0A482V1G4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V1G4_9ARCH) HSP 1 Score: 72.4 bits (176), Expect = 3.280e-13 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 277 IFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFL 480
+F W + E R Y G GN+KE VP+M FLLMTVFPQ+ + FLA+FQ FPVD I+G++ FL
Sbjct: 6 VFCIWFVIEPIRIYVGMAGNLKESVPNMATFLLMTVFPQLPLVCFLAYFQPMFFPVDKIVGSLMFIFL 73
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Match: A0A507EEW2_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EEW2_9FUNG) HSP 1 Score: 68.9 bits (167), Expect = 6.090e-11 Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 1
Query: 118 YASEISSSLSLQIIIYYNGLLSLIYFVLGGGLV-IEKLCN--YRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQE 564
++SEI S+L LQI+++ N L + +G + + K + Y S+L VL P F A+ E R Y GYKGN+ E VP + LL+TVFPQ+F + +LA + I + FL + + + ++ ++A+FF A E
Sbjct: 49 HSSEILSNLYLQILLFCNVWFMLPVWAIGMTITAVWKASHDTYSTSSKLGTIVLVPTF---ALIECSRLYLGYKGNLHEKVPEVAGHLLLTVFPQLFIVFYLAAAGQATGFETAINILYVLLFLLPQIVAAVIAARGLVRAQSARFFLTAHE 197 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16073.1 >prot_E-siliculosus-1a_M_contig8.16073.1 ID=prot_E-siliculosus-1a_M_contig8.16073.1|Name=mRNA_E-siliculosus-1a_M_contig8.16073.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=204bp MFRRRGGAGYRRLRVAATGSTHDDVGETYRENPSADRSRYASEISSSLSLback to top mRNA from alignment at E-siliculosus-1a_M_contig8:445624..448150- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16073.1 ID=mRNA_E-siliculosus-1a_M_contig8.16073.1|Name=mRNA_E-siliculosus-1a_M_contig8.16073.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2527bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:445624..448150- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:445624..448150- >mRNA_E-siliculosus-1a_M_contig8.16073.1 ID=mRNA_E-siliculosus-1a_M_contig8.16073.1|Name=mRNA_E-siliculosus-1a_M_contig8.16073.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1224bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:445624..448150- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |