mRNA_E-siliculosus-1a_M_contig8.16067.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16067.1
Unique NamemRNA_E-siliculosus-1a_M_contig8.16067.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 5.240e-95
Identity = 270/333 (81.08%), Postives = 287/333 (86.19%), Query Frame = 3 
Query:  138 MSASKREEEDRSRLDGVEIEVFKLVQREATSEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGADAGAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGELESALHVAAARGAEDSCRALMIAGADPDLRDRGDYGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF----DNHRSPLDVAAHRGHADVLKTLLEKDSSEVNATNDHGWAALHHAAYVDGPVRDNGDAVRALLEAGADVNVKSTNDSCATPLHVAVNRRIAS 1124
            M  S REEEDRSRL G EIE+FKL++REAT EQWKEWLRAPLEHAAAEGNLDLFTRLMDAGA+  AGWRGCHGRTLLGAAA GRSEKM+RTLLTAGATDDVNVLFGGE ESALHVAAARGA+D+CRALMIAGADP++RDR    P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +  SPL++AA RGHADVLK LL+K SSEV+  ND GWAALH+ A  D  VRD GDAVR LL AGADVNVK TNDSCATPLH+AVNR + S
Sbjct:    1 MPGSNREEEDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTS 333
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 3.830e-87
Identity = 188/334 (56.29%), Postives = 206/334 (61.68%), Query Frame = 3 
Query:  138 MSASKREEEDRSRLDGVEIEVFKLVQREATSEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGADAGAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGELESALHVAAARGAEDSCRALMIAGADPDLRDRGDYGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDNHRSPLDVAAHRGHADVLKTLLEKDSSEVNATNDHGWAALHHAAYVDGPVRDNGDAVRALLEAGADVNVKSTNDSCATPLHVAVNRRIASDFNSR 1139
            M  SKREEEDRSRLDG EIE+FKLVQR ATSEQWKEWLRAP EHAAAEGNLD FTRLMDAGA+AGAGWRGC+GRTLLGAAAFGRSEKMVRT LTAGATDDVNVLFGGE E                ALMI GADP++RDR    PL                             XXXXXXXXXXXX                                                   +  RSPL++AA+RG ADV+K LL+KDS EV+AT+  GWAALH+AA +DGPVRDNGDAVR LL AGADV+ K T D C T L++AVNRRIASD   R
Sbjct:    1 MPGSKREEEDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGERE----------------ALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRT-------------------NGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIR 299
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 1.350e-65
Identity = 190/369 (51.49%), Postives = 209/369 (56.64%), Query Frame = 3 
Query:   54 RQQSLPAR*RHPRTPTSPATV**AQSKTMSASKREEEDRSRLDGVEIEVFKLVQREATSEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGADAGAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGELESALHVAAARGAEDSCRAL-------MIAGADPDLRDRGDYGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDNHRSPLDVAAHRGHADVLKTLLEKDSSEVNATNDHGWAALHHAAYVDGPVRDNGDAVRALLEAGADVNVKSTNDSCATPLHVAVNRRIASDFNSR 1139
            R  SLPAR R PRT T P  +  A   TMSASKR+EE RS LD  EIE+FKLVQ+EATSEQWKEWLRAPLEHAAAEGNLD FTRLMDAGA+  AG RGCHGRTLLGA A  RSEKMVRTLLT GATDDV VLFG E ES LHV+AARGAEDSCR +           AD   +      PL                              XXXXXXXXXXXXXXXXXXXXXXXX                                      +  RSPL++A +R                          ALH+AA +DGPV DNGDAVR LL AGA++N K T D C T L++AVNRR+ASD   R
Sbjct:  473 RLVSLPARQRQPRTLTPPTPIQLAPRNTMSASKRQEEGRSCLDCFEIEIFKLVQKEATSEQWKEWLRAPLEHAAAEGNLDFFTRLMDAGANVEAGRRGCHGRTLLGATACDRSEKMVRTLLTTGATDDVAVLFGVEHESPLHVSAARGAEDSCRVIGENVVRYTSLPADVHAKTTSQQTPLHLAASEGHALCIFELLLGGADKDVVDRHGKXXXXXXXXXXXXXXXXXXXXXXXXYSLRT---------------------------------NGSRSPLEIATNR--------------------------ALHYAASIDGPVHDNGDAVRVLLRAGANINAKGTKDPCDTSLYLAVNRRMASDGTIR 782
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 5.810e-64
Identity = 190/337 (56.38%), Postives = 217/337 (64.39%), Query Frame = 3 
Query:  138 MSASKREEEDRSRLDGVEIEVFKLVQREATSEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGADAGAGWRGC--HGRTLLGAAAFG-RSEKMVRTLLTAGATDDVNVLFGGELESALHVAAARGAEDSCRALMIAGADPDLRDRGDYGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDNHRSPLDVAAH--RGHADVLKTLLEKDSSEVNATNDHGWAALHHAAYVDGPVRDNGDAVRALLEAGADVNVKS---TNDSCATPLHVAVNRRIAS 1124
            MSAS+REE DRSR+DG EIE+FKLV+ EATS+QWK+WLR PLEHAAA+GNLDLFTRL+DAGA    GW+G     RTLLGAAA G +S+ MV+ LL AG T+ VN  FG   ESALHV  ARGAED+ +ALM+AGADP+L +     PL                                 XXXXXXXXXXX                     XXXXXXXXXXXXXXXXXXXXXXXXXX               RG+A +LK  L+KDS EV+AT+  GW ALH+AAYVD  V DNGDAVRALLEAGADVNVK+    +D   TPLHVAVNRR+AS
Sbjct:    1 MSASEREE-DRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVTDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMAS 336
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 1.740e-61
Identity = 231/330 (70.00%), Postives = 267/330 (80.91%), Query Frame = 3 
Query:  141 SASKREEEDRSRLDGVEIEVFKLVQREATSEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGADAGAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGELESALHVAAARGAEDSCRALMIAGADPDLRDRGDYGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDNHRSPLDVAAHRGHADVLKTLLEKDSSEVNATNDHGWAALHHAAYVDGPVRDNGDAVRALLEAGADVNVKSTNDS--CATPLHVAVNRRIAS 1124
            +A+ ++ +DR+R+DG E+E+FKLVQREATS+QWKEWLRAPLEHAAA GNL LFTRLMDAGA A AGWRGC GRTLLGAAA  +++K++R LLTAGA  DVNVLFG + ESALH+AAARGAE++ +ALMIAGA+P+LR        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  ++K  L+ D+S VNAT+ +G+ ALHHAA ++   RD GDAVR LL AGADV+ K+T+D   CA PLH+AV  R+ S
Sbjct:    4 AAASQQSQDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCA-PLHIAVCGRVPS 332
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 2.250e-61
Identity = 168/334 (50.30%), Postives = 191/334 (57.19%), Query Frame = 3 
Query:  138 MSASKREEEDRSRLDGVEIEVFKLVQREATSEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGADAGAGWRGCHGRTLLGAAAFGRSEKMVRTLLTAGATDDVNVLFGGELESALHVAAARGAEDSCRALMIAGADPDLRDRGDYGPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDNHR-----SPLDVAAHRGHADVLKTLLEKDSSEVNATNDHGWAALHHAAYVDGPVRDNGDAVRALLEAGADVNVKSTNDSCATPLHVAVNRRIAS 1124
            MS SKRE  DRSR+DG E+++FKLVQ E T EQWK+WL APL HAAA+G LDLFTRL++AGAD  AGWRGCHGRTLLG AA     +MVR  L AGATDDVNV FG   +SAL VAAARGAE SC ALMIAGADP+  D  D   L                                                                   XXXXXXXXXXXXXXXXXXXXXXXX   H      SP D+AA RGHA +LK  LE  ++   AT+ +GW ALH AA VD PV D+G A R LLEAGADVN +   + C +     V R +A+
Sbjct:    1 MSGSKRE--DRSRVDGFEMKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRGCHGRTLLGEAARSDGNQMVRAFLEAGATDDVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDDTVQLPSLLHLAGAAGHHRVVRVILQYGAYVDPKAIVNETPLHCAASKGHTSCVFELLMGGADMDAVAFLEGXXXXXXXXXXXXXXXXXXXXXXXXDRCHPNLDGFSPSDIAAKRGHATILKPFLETGTNVDAATDQYGWTALHSAACVDEPVIDDGAAARVLLEAGADVNAR---EGCTSGQRQVVRREVAA 329
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 6.670e-59
Identity = 121/174 (69.54%), Postives = 136/174 (78.16%), Query Frame = 1 
Query: 1129 SIHALLEGGGNVNAHAPFDGMPLHVACRHSSVSGVEVLLCWGADERLTNNDGDTPADVVGALQQNDLDDEELEADYQRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANGSECGSSSNNGNSVKVARVSVEGSGRDDEEAEN-MMVDLRDLVGRLVGLEADGLFRLVVGFL 1647
            +I ALLEG  +V++ A  D  PLH+AC+H+SVSGVE+LL WGADE+LTNN GD PADV+ A QQ DLDDEE +AD QRI RML RAPADRSWRRRGWLVLSR CPTRVQI NGS     S NGNS KVA +S E +GR DEE E+ +M DLRDLV  LVGLEAD LFRLVV FL
Sbjct:   99 TIRALLEGA-DVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNGSSS-RGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 6.760e-56
Identity = 116/172 (67.44%), Postives = 134/172 (77.91%), Query Frame = 1 
Query: 1138 ALLEGGGNVNAHAPFDGMPLHVACRHSSVSGVEVLLCWGADERLTNNDGDTPADVVGALQQNDLDDEELEADYQRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIAN-GSECGSSSNNGNSVKVARVSVEGSGRDDEEAENMM-VDLRDLVGRLVGLEADGLFRLVVGFL 1647
            ALLEGG N NAH    G PLHVAC HS+V+ VE+LL WGADE  +N++GD PADV+G   + D++DE+++AD++RIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIAN GS     + N    KVARVS E  G D+EEAEN M VD   LVG L+GLEADGLFRLVVGFL
Sbjct:  336 ALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRV---NRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 2.650e-53
Identity = 105/140 (75.00%), Postives = 112/140 (80.00%), Query Frame = 3 
Query:  138 MSASKREEEDRSRLDGVEIEVFKLVQREATSEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGADAGAGWRGCHGRTLLGAAAFGR-SEKMVRTLLTAGATDDVNVLFGGELESALHVAAARGAEDSCRALMIAGADPDLRD 554
            M A KR+   RSRLDG EIE+FKLV+ EA  EQWK+W RAPLEHA A GNLDLFTRLMDAGAD  AGWRGCHGRTLLGAAA G  S+KMVR LL AGA  DVNV FG   ES LHV+AARGAE SC ALMIAGADP+LRD
Sbjct:    1 MYAPKRKGH-RSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCTALMIAGADPNLRD 139
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 2.390e-50
Identity = 103/149 (69.13%), Postives = 118/149 (79.19%), Query Frame = 3 
Query:  138 MSASKREEEDRSRLDGVEIEVFKLVQREATSEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGADAGAGWRG--CHGRTLLGAAAFG-RSEKMVRTLLTAGATDDVNVLFGGELESALHVAAARGAEDSCRALMIAGADPDLRDRGDYGPL 575
            MSASK    DRSR+DG EIE+FKLV+ EAT+ QWK+WLR PLEHAAA+GNLDLFTRLMDAGA    GWRG  CH RTLLGAAA G +S+KM+  LL AG TDDVN +FG E ESALHV+AARGAE++ +ALM AGADPDL +  D  PL
Sbjct:    1 MSASKG---DRSRVDGFEIEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVNAVFGTERESALHVSAARGAEEASKALMAAGADPDLGNFEDESPL 146
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQN0_ECTSI5.240e-9581.08Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
A0A6H5L812_9PHAE3.830e-8756.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7E1_9PHAE1.350e-6551.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ92_ECTSI5.810e-6456.38Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ecto... [more]
D8LD22_ECTSI1.740e-6170.00MHC_I C-terminus family protein n=1 Tax=Ectocarpus... [more]
A0A6H5KQY9_9PHAE2.250e-6150.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXF0_9PHAE6.670e-5969.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB27_ECTSI6.760e-5667.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LQE2_ECTSI2.650e-5375.00Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LQE9_ECTSI2.390e-5069.13Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:373582..377178 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size462
Model size3597
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EggNOG OGsCOG0666@1,KOG4177@2759
EggNOG free text desc.response to abiotic stimulus
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
KEGG koko:K21440
Seed eggNOG ortholog2880.D8LQN0
Seed ortholog evalue2.3e-57
Seed ortholog score228.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16067.1prot_E-siliculosus-1a_M_contig8.16067.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig8 374770..375231 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936161.3889637-UTR-E-siliculosus-1a_M_contig8:373581..3747691622936161.3889637-UTR-E-siliculosus-1a_M_contig8:373581..374769Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 373582..374769 +
1696250955.614448-UTR-E-siliculosus-1a_M_contig8:373581..3747691696250955.614448-UTR-E-siliculosus-1a_M_contig8:373581..374769Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 373582..374769 +
1622936161.4500754-UTR-E-siliculosus-1a_M_contig8:375231..3771781622936161.4500754-UTR-E-siliculosus-1a_M_contig8:375231..377178Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 375232..377178 +
1696250955.6367247-UTR-E-siliculosus-1a_M_contig8:375231..3771781696250955.6367247-UTR-E-siliculosus-1a_M_contig8:375231..377178Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 375232..377178 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936161.4097245-CDS-E-siliculosus-1a_M_contig8:374769..3752311622936161.4097245-CDS-E-siliculosus-1a_M_contig8:374769..375231Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 374770..375231 +
1696250955.6267207-CDS-E-siliculosus-1a_M_contig8:374769..3752311696250955.6267207-CDS-E-siliculosus-1a_M_contig8:374769..375231Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 374770..375231 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig8.16067.1

>prot_E-siliculosus-1a_M_contig8.16067.1 ID=prot_E-siliculosus-1a_M_contig8.16067.1|Name=mRNA_E-siliculosus-1a_M_contig8.16067.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=154bp
MPLHVACRHSSVSGVEVLLCWGADERLTNNDGDTPADVVGALQQNDLDDE
ELEADYQRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANGSECGSSS
NNGNSVKVARVSVEGSGRDDEEAENMMVDLRDLVGRLVGLEADGLFRLVV
GFL*
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mRNA from alignment at E-siliculosus-1a_M_contig8:373582..377178+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig8.16067.1 ID=mRNA_E-siliculosus-1a_M_contig8.16067.1|Name=mRNA_E-siliculosus-1a_M_contig8.16067.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3597bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:373582..377178+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTCGTGTTTGTCTCGCCGCATGGCATCGATCTCCGCCTCACTGCTGCCAG
CCAAGACAGCAGAGCCTGCCAGCGAGATAGCGCCACCCTCGTACACCAAC
ATCACCAGCAACGGTCTAGTAGGCGCAATCCAAGACCATGTCCGCGTCAA
AACGTGAAGAAGAGGACCGCTCACGACTTGACGGCGTCGAGATCGAGGTT
TTCAAACTCGTCCAGAGGGAGGCAACTTCGGAGCAGTGGAAGGAGTGGCT
TCGAGCACCTCTGGAGCATGCCGCGGCCGAGGGGAACTTGGATCTCTTCA
CACGGCTGATGGACGCTGGTGCCGACGCGGGAGCAGGCTGGCGGGGTTGC
CATGGCCGAACACTGCTGGGTGCGGCTGCATTTGGTAGGAGTGAGAAGAT
GGTACGAACTCTGCTCACCGCCGGGGCGACGGATGATGTAAACGTCCTGT
TCGGGGGTGAACTCGAGTCCGCTCTCCACGTTGCAGCAGCTCGGGGTGCT
GAAGACTCATGCAGGGCGCTCATGATCGCTGGAGCAGACCCAGATCTACG
TGATCGGGGGGATTATGGTCCGCTCCACGTCGCTGCCATAGCTGGGCATC
ACCGAGTTGCAGGGAGCCTTCTTCTGAATAAGGCCGATGTAGACGCCAAG
ACGGCTTCCCAGCAGACTCCTCTCCACGTGGCAGCTTTCGAGGGCCATAC
GCTGTGCATCTCTGAGCTTTTGTTGGGCGGTGCAGACAAGGAAGTGGTCG
ATCGTTACGGTGAAACGGCACTGTTCAAGGCCGTAGAAAACAACCACGTC
GAGGCTGTCGAAAAGCTTCTAGCTGCCGGTGCCAACCACCGCATGCGTTT
CGACAACCACCGTTCTCCGCTCGATGTTGCTGCACACAGAGGACACGCAG
ACGTCTTAAAGACCTTGCTCGAAAAAGACAGCAGTGAAGTCAACGCCACT
AATGATCACGGATGGGCAGCTCTACATCATGCGGCATATGTTGATGGACC
TGTTCGCGACAACGGCGATGCTGTCCGTGCGCTGTTGGAAGCTGGGGCTG
ATGTCAACGTGAAGAGCACCAACGACTCCTGCGCTACGCCGCTCCATGTT
GCCGTTAATCGTCGGATAGCATCCGACTTCAATTCACGCCCTGCTGGAGG
GAGGGGGCAATGTCAATGCGCACGCTCCATTCGATGGGATGCCACTGCAT
GTAGCTTGCAGGCATTCGAGTGTTAGTGGCGTGGAGGTTTTACTGTGTTG
GGGAGCAGATGAGAGGCTCACGAACAACGATGGAGACACACCCGCAGACG
TGGTAGGAGCGCTGCAACAGAATGACCTTGACGACGAAGAACTCGAGGCC
GACTACCAGCGCATTCGACGAATGTTGGCGCGCGCTCCAGCCGACAGGTC
ATGGCGTCGCCGCGGCTGGCTAGTGCTGAGCCGTTCCTGCCCGACCAGGG
TGCAGATCGCAAACGGAAGCGAATGCGGCAGCAGCAGCAACAACGGTAAC
TCCGTCAAGGTGGCGAGGGTCAGCGTCGAGGGTTCGGGTCGGGATGATGA
GGAGGCGGAAAACATGATGGTGGACTTGAGGGATTTGGTGGGCAGGCTGG
TCGGACTGGAGGCAGATGGCTTGTTCCGCTTGGTGGTGGGCTTTCTGTGA
GGTACGAGAAAGAGAAAGAGTTTTGCCGTAACGTTGACGGTGATTACGTT
GCTGTCGAAGCGAAAAGGGCGACCTACAAATTCTCTTGAGTGTTCGGGAG
CACAAGCACAGAAATTACGGAAAGTTGTTTTTTTCTAGATTGCTTCGCAC
CACCAAATCCGTTGTACTGATATTCGGCGGAATGATCGAAAAAGTCCGAT
GTCTTTTTGCTCCAGATATGAGGCATACCCTGTCGGTGTAGCGGGATGGG
TGTCGATTATAATCATCAATATTGGACACAGCAGTTGTAAAGGGCGTTGA
TCGAAAGTTGCCCGATGCTTTTTTGCTTGAGAAATGATGCATACCCTGTG
AGACGTCTCGCGCGGCGAATGGGTAACAATACACGAATTGAAATTCGTTC
GTTGGAAACAGTTGTATGATCCGGAAGTGCGAAACAAACGCGGTTTTGAA
CGGTGCCGGCCGAACAAGGAATAGCTCGTACTGCGGTTACGGTCGACCAT
TTGTTGGTTTCCCGCGATATGGTTCTTCGCCGTTTGGGAGTGGGAGCAAA
CTACTATGATGCAGTGCCCTTCCGGTTGGTTCCTGCTATATTACATGGTG
TGATGTGCATTTGGCGGTTGTCCAACAGGCTGCGACGAAGGTATTGTGAC
CATGCTGTAGCTGGTCATGCCGCTCAAGAAGTCTAGCGGATGCGTCAGTT
GGAATTACCGCACACACCTTTTGTCCTGTGCTCACCGCTGGCGGTGCAAC
TCACCAATGACTTTCTGTGTAGCGATACTTCCGCAGTGCAACACTCCTTT
GGCTGTCATTCCCGGCCTGGGCTAGTTTCAAGGGCATGTAGACCCCTCTG
CTACTGCTGTTGCATACTTGAAAAGATGGAATGGTCCACTTGATAGTTGT
GCTTTGACTACGCGCCGTCTTCCCGTTGTTTTCCCCCGTGACTATAGTTC
TTGAGGCTCCAAGCACAGGAAAAGGTTGGACCGGTGTCCTTTCGTTCGAG
CCTATCGTAGCCGTCTGATTCTTCGGGCCAGGTGGTGGCCACTGCAATAT
TTCGATGGTGAAGATGGCGGCCGGAGAGTTGGCACAGCTTATGGTGGGCC
AGGACTGAACCCTGGGGAGAGCTGAACCTTGGTTGTCGCTTGAGAACAGG
TTGATGTGCGAAACCGCTTTCTCTCTGTTTTTAGATGGACTCATTTTGGG
CACATATCCCCCCACCCCCGTCGAACACGCCGCTGGGTGTCTCGGTGTGT
GGCTTGTGCCTTGTCCGTGCTTTCTTTCGAGATTGTTCTTGCTTGCTTTC
TGTCTCTTCGATCCCGTCGCGCCTGTCGTTGTAAGGGCGTTCTATTTCGT
GCTTTCTCTAGGTCACTGTGTGTGTGACAGCAAGACCCGTGACGAGTCCG
TCTCTCACGCCTTGGTACGGTGTTGCGGCTGGCAGGTTTTTTAACCCGGT
GATGGCAAAGAAGGATGCCGGGTGCGTTTTGAATCACGGAGGGACCACGG
CTGCCATTTTATCCCGTTTGGTTGTCAGGTGGCTTCCCCGCATGTTGTTT
TTTGGGGCGTGCATCAAATCAAAGAGAGACAGACATACATTTCACGTTGT
GTTTATTTTGCCGAGGGGAGCGCGATGTGTTTCTTGAAGAGGAGCTCCTA
TTACGGATCCGGAGTATGTCGCAAGACAAGTGTCTTGTACGCTTGCCGTT
TGGTGGAGTGGGGTGGACGTGGAGCAGTCCGCGGTGCTGTTGTGATACCT
CAACACCAGGGACGTTGTAGCGTTGTCACATTGTTTGCCGCGGCGGGGGA
TTCAACCTTGTCAATAGATCGCATAACTATGATGCATTGGCGGGGCCGAT
TCCGGTTTTCCTGCTCGTCATAGTTTCCTGCTCTAGTTGATTGAATGAGA
TCCTGTGAGGTCCACTGCTGTTGTAACGATTTTGCGTCTCTCGTCTC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:373582..377178+

>mRNA_E-siliculosus-1a_M_contig8.16067.1 ID=mRNA_E-siliculosus-1a_M_contig8.16067.1|Name=mRNA_E-siliculosus-1a_M_contig8.16067.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=924bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:373582..377178+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCACTGCATGTAGCTTGCAGGCATTCGAGTGTTAGTGGCGTGGAGGT
TTTACTGTGTTGGGGAGCAGATGAGAGGCTCACGAACAACGATGGAGACA
CACCCGCAGACGTGGTAGGAGCGCTGCAACAGAATGACCTTGACGACGAA
GAACTCGAGGCCGACTACCAGCGCATTCGACGAATGTTGGCGCGCGCTCC
AGCCGACAGGTCATGGCGTCGCCGCGGCTGGCTAGTGCTGAGCCGTTCCT
GCCCGACCAGGGTGCAGATCGCAAACGGAAGCGAATGCGGCAGCAGCAGC
AACAACGGTAACTCCGTCAAGGTGGCGAGGGTCAGCGTCGAGGGTTCGGG
TCGGGATGATGAGGAGGCGGAAAACATGATGGTGGACTTGAGGGATTTGG
TGGGCAGGCTGGTCGGACTGGAGGCAGATGGCTTGTTCCGCTTGGTGGTG
GGCTTTCTGTGAATGCCACTGCATGTAGCTTGCAGGCATTCGAGTGTTAG
TGGCGTGGAGGTTTTACTGTGTTGGGGAGCAGATGAGAGGCTCACGAACA
ACGATGGAGACACACCCGCAGACGTGGTAGGAGCGCTGCAACAGAATGAC
CTTGACGACGAAGAACTCGAGGCCGACTACCAGCGCATTCGACGAATGTT
GGCGCGCGCTCCAGCCGACAGGTCATGGCGTCGCCGCGGCTGGCTAGTGC
TGAGCCGTTCCTGCCCGACCAGGGTGCAGATCGCAAACGGAAGCGAATGC
GGCAGCAGCAGCAACAACGGTAACTCCGTCAAGGTGGCGAGGGTCAGCGT
CGAGGGTTCGGGTCGGGATGATGAGGAGGCGGAAAACATGATGGTGGACT
TGAGGGATTTGGTGGGCAGGCTGGTCGGACTGGAGGCAGATGGCTTGTTC
CGCTTGGTGGTGGGCTTTCTGTGA
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