mRNA_E-siliculosus-1a_M_contig8.16060.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16060.1
Unique NamemRNA_E-siliculosus-1a_M_contig8.16060.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: D8LQL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL8_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 1.820e-113
Identity = 184/205 (89.76%), Postives = 190/205 (92.68%), Query Frame = 3
Query:  444 ALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERK-TRSDATNPEVMALARLCWHSDDVSRPTGNGEICNESKKSDAPSHPRRQLKHR 1055
            ALEQRRA A+ELL+NDPVLMERVR+MLRAGAMEKAAAKA  VDGANTRAL+ASLQALKRHHTS+IGRIAYTTALAA AGA A TCDP DPCRPGERCDSVE GGVSLAERARSLEIRCKTF EARSRMHNTNHDLAPEKALA G YMYSERK T SDATNPEVMALARL  HSDDVSRPTGNGEICNESKKSDAPSHPRRQLKH+
Sbjct:    5 ALEQRRACAIELLENDPVLMERVRAMLRAGAMEKAAAKAAAVDGANTRALRASLQALKRHHTSNIGRIAYTTALAATAGAGAHTCDPGDPCRPGERCDSVERGGVSLAERARSLEIRCKTFVEARSRMHNTNHDLAPEKALAGGYYMYSERKKTTSDATNPEVMALARLYCHSDDVSRPTGNGEICNESKKSDAPSHPRRQLKHK 209          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 3.110e-105
Identity = 201/319 (63.01%), Postives = 232/319 (72.73%), Query Frame = 3
Query:  153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGNG--EICNESKKSDAPSHPRRQLKHRETTCGGCSSIASSIWR 1103
            R+GT +A  K + SVV D+  L+EKGREHVE IRERASK GK+Q      XXXXXXXX  RK ADAALSDPLA A  GG RSGA  E     SR+E   E+RR+ AM+L++NDPVLMERVR+ML AGA E+AAAK   +D ANTRAL+ASLQALK+H  SSIG   Y TALA AAGA   TC   D C PG+RC  VE GGVSLAERA SL IR +TF++AR RMHNTNHD+AP+ A ++GCY+Y+ERKTRSD TNPEVMALAR  WHSDDVSR TGN   ++  ESKK DAPSHPRRQL H+            S+WR
Sbjct:   35 RKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPE----TSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHK----------GDSVWR 339          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 5.830e-101
Identity = 201/319 (63.01%), Postives = 232/319 (72.73%), Query Frame = 3
Query:  153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGNG--EICNESKKSDAPSHPRRQLKHRETTCGGCSSIASSIWR 1103
            R+GT +A  K + SVV D+  L+EKGREHVE IRERASK GK+Q      XXXXXXXX  RK ADAALSDPLA A  GG RSGA  E     SR+E   E+RR+ AM+L++NDPVLMERVR+ML AGA E+AAAK   +D ANTRAL+ASLQALK+H  SSIG   Y TALA AAGA   TC   D C PG+RC  VE GGVSLAERA SL IR +TF++AR RMHNTNHD+AP+ A ++GCY+Y+ERKTRSD TNPEVMALAR  WHSDDVSR TGN   ++  ESKK DAPSHPRRQL H+            S+WR
Sbjct:   35 RKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPE----TSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHK----------GDSVWR 339          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5KQS4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQS4_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 3.600e-93
Identity = 176/278 (63.31%), Postives = 202/278 (72.66%), Query Frame = 3
Query:  153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGN 986
            ++GT KA    L SVV D+  L EKGREH E I+ERASK G QQA     XXXXX     RK AD ALSDPLA A  GG RSGA  E     SR+E A E+RR+ A+EL++ D VLMERVR+ML A A ++AAAK   V+ ANTRAL+ASLQALKRH  SSIG  AYTTALA AAGA   TC   + C PG RC   EPGGVS AERA+SL IR +TF++AR RMHNTNHD+AP  A++DGCY+Y+ERKTRSD TNPEVMALA+  WHSDDVSR TGN
Sbjct:   35 KKGTTKAAGSKLSSVVADEDQLREKGREHAEAIQERASKRGNQQA--AXXXXXXXSGKGKRKGADVALSDPLALAHDGGTRSGATPE----ASREEQASEERRSSALELIQKDHVLMERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCPDPNLCPPGNRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRATGN 306          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5K647_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K647_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 1.030e-84
Identity = 155/241 (64.32%), Postives = 180/241 (74.69%), Query Frame = 3
Query:  333 RKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGNGEICNESKKSDAPSHPRRQLKHR 1055
            RK AD ALSDPLA A   G RSGA  E     SR+E A E+RR+ A+EL++ D VLMERVR+ML A A ++AAAK   V+ ANTRAL+ASLQALKRH  SSIG  AYTTALA AAGA   TC   + C PG+RC   EPGGVS AERA+SL IR +TF++AR RMHNTNHD+AP  A++DGCY+Y+ERKTRSD TNPEVMALA+  WHSDDVSR      +  ESKK DAPSHPRRQL H+
Sbjct:   37 RKGADVALSDPLALAHDVGTRSGATPE----ASREEQASEERRSSALELIQKDHVLMERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCSDPNLCHPGKRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRAKN---MYKESKKRDAPSHPRRQLMHK 270          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5JZE2_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE2_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 2.590e-75
Identity = 160/282 (56.74%), Postives = 188/282 (66.67%), Query Frame = 3
Query:  153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYM-------------------------YSERKTRSDATNP 923
            R+GT +A  K +  VV D+  L+EKGRE+VE IRERASK GK+Q  A   XXXXXX     K ADAALSDPLA A  GG RSGA  E     SR+E   E+RR+ AM+L++NDPVLMERVR+ML AGA E+AAAK   +D ANTRAL+ASLQALK+H  SS G   Y TALA AAGA   TC   D C PG+RC  VE GGVSLAERA SL IR +TF++AR RMHNTNHD+AP+ A+++GCY                          Y+ERKTRSD TNP
Sbjct:   36 RKGTTEAAGKPVQCVVADEVELLEKGREYVEGIRERASKRGKRQPAAXXXXXXXXXKKAKLKEADAALSDPLALAHDGGTRSGATPE----TSREEADAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSTGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAVSEGCYXXXXXXXXXXXXXXXXXXXXXXXXXXYNERKTRSDVTNP 313          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5KF48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF48_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 5.030e-73
Identity = 143/218 (65.60%), Postives = 163/218 (74.77%), Query Frame = 3
Query:  333 RKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGN 986
            RK  DAALSDPLA A  GG RSGA  E    V R+E   E+RR+ A+EL + D VLMERVR ML A A ++AAAK   V+ ANTRAL+ASLQALKRH  SSIG  AYTTALA AAGA   TC   + C PG RC   EPGGVS AERA+SL IR +TF++AR RMHNTNHD+AP  A++DGCY+Y+ERKTRSD TNPEVMALA+  WHSDDVSR TGN
Sbjct:  426 RKGVDAALSDPLALAHDGGTRSGATPE----VLREEQGSEERRSSALELTQKDHVLMERVRVMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCPDPNLCPPGNRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRATGN 639          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5KA34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA34_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 2.250e-68
Identity = 147/241 (61.00%), Postives = 171/241 (70.95%), Query Frame = 3
Query:  225 KGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARL 947
            K  E VE IRERASK GK+Q      XXXXXXXX  RK ADAALSDPLA A  GG RSGA  E     SR+E   E+RR+ AM+L++NDPVLMERVR+ML AGA E+ AA    +D ANTRAL+ASLQALK+H  SSIG   Y TALA A GA   TC   D C PG+RC  VE GGVSLAERA SL IR +TF++AR RMHN NHD+AP+ A+++GCY+Y++RKTRSD T P      RL
Sbjct:   14 KASEXVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPE----TSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQVAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAPGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNMNHDIAPKIAVSEGCYVYNDRKTRSDVTIPRSWLSPRL 250          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5JH54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH54_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 3.150e-66
Identity = 146/257 (56.81%), Postives = 179/257 (69.65%), Query Frame = 3
Query:  153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNP 923
            R+GT +A  K + SV  D+  L+E GREHVE IRERASK GK+Q      XXXXXXXX  RK ADAALSDPLA A  GG RSGA  E     SR+E   ++RR+ AM+L++NDPVL+ERVR+ML  GA E+AAAK   +D ANTRAL+ASLQALK+H  S        +A  ++   RA     +D C  G+RC  VE GGVSLAERA SL IR +TF++AR RM+NTNHD+AP+ A ++G Y Y+ERKTRSD TNP
Sbjct:   35 RKGTTEAAGKPMQSVFADEVELLETGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPE----TSREEAVADERRSSAMDLMQNDPVLIERVRAMLDTGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSCRADHFPDSARCSSRSGRAHV---SDVCHAGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMYNTNHDIAPKIAASEGYYEYNERKTRSDVTNP 284          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5KQE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE8_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 4.440e-59
Identity = 108/158 (68.35%), Postives = 124/158 (78.48%), Query Frame = 3
Query:  501 MERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSR 974
            MERVR+ML A A ++AAAK   V+ ANTRAL+ASLQALKRH  SSIG  AYTTAL  AAGA   TC   + C PG RC   EPGGVS AERA+SL IR +TF++AR RMHNTNHD+AP  A++DGCY+Y+ERKTRSD TNPEVMALA+  WHSDDVSR
Sbjct:    1 MERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGCTAYTTALTTAAGAGEHTCPDPNLCPPGNRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSR 158          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQL8_ECTSI1.820e-11389.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF90_9PHAE3.110e-10563.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7E6_9PHAE5.830e-10163.01Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQS4_9PHAE3.600e-9363.31Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K647_9PHAE1.030e-8464.32Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JZE2_9PHAE2.590e-7556.74Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF48_9PHAE5.030e-7365.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA34_9PHAE2.250e-6861.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH54_9PHAE3.150e-6656.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQE8_9PHAE4.440e-5968.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:317215..320623 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size636
Model size1663
Exons4
Ec32 orthologEc-10_006140.1
Ec32 ortholog descriptionexpressed unknown protein
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16060.1prot_E-siliculosus-1a_M_contig8.16060.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig8 318350..319357 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936160.6429534-UTR-E-siliculosus-1a_M_contig8:317214..3176901622936160.6429534-UTR-E-siliculosus-1a_M_contig8:317214..317690Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 317215..317690 -
1696250955.1714609-UTR-E-siliculosus-1a_M_contig8:317214..3176901696250955.1714609-UTR-E-siliculosus-1a_M_contig8:317214..317690Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 317215..317690 -
1622936160.7068977-UTR-E-siliculosus-1a_M_contig8:318268..3183491622936160.7068977-UTR-E-siliculosus-1a_M_contig8:318268..318349Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 318269..318349 -
1696250955.184577-UTR-E-siliculosus-1a_M_contig8:318268..3183491696250955.184577-UTR-E-siliculosus-1a_M_contig8:318268..318349Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 318269..318349 -
1622936160.7556214-UTR-E-siliculosus-1a_M_contig8:319357..3193841622936160.7556214-UTR-E-siliculosus-1a_M_contig8:319357..319384Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 319358..319384 -
1696250955.2338417-UTR-E-siliculosus-1a_M_contig8:319357..3193841696250955.2338417-UTR-E-siliculosus-1a_M_contig8:319357..319384Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 319358..319384 -
1622936160.7738883-UTR-E-siliculosus-1a_M_contig8:320180..3206231622936160.7738883-UTR-E-siliculosus-1a_M_contig8:320180..320623Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 320181..320623 -
1696250955.2441134-UTR-E-siliculosus-1a_M_contig8:320180..3206231696250955.2441134-UTR-E-siliculosus-1a_M_contig8:320180..320623Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 320181..320623 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936160.722137-CDS-E-siliculosus-1a_M_contig8:318349..3184741622936160.722137-CDS-E-siliculosus-1a_M_contig8:318349..318474Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 318350..318474 -
1696250955.2048619-CDS-E-siliculosus-1a_M_contig8:318349..3184741696250955.2048619-CDS-E-siliculosus-1a_M_contig8:318349..318474Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 318350..318474 -
1622936160.7369628-CDS-E-siliculosus-1a_M_contig8:318846..3193571622936160.7369628-CDS-E-siliculosus-1a_M_contig8:318846..319357Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 318847..319357 -
1696250955.2219963-CDS-E-siliculosus-1a_M_contig8:318846..3193571696250955.2219963-CDS-E-siliculosus-1a_M_contig8:318846..319357Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 318847..319357 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig8.16060.1

>prot_E-siliculosus-1a_M_contig8.16060.1 ID=prot_E-siliculosus-1a_M_contig8.16060.1|Name=mRNA_E-siliculosus-1a_M_contig8.16060.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=212bp
MELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKR
HHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAE
RARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATN
PEVMALARLCWHSDDVSRPTGNGEICNESKKSDAPSHPRRQLKHRETTCG
GCSSIASSIWR*
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mRNA from alignment at E-siliculosus-1a_M_contig8:317215..320623-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig8.16060.1 ID=mRNA_E-siliculosus-1a_M_contig8.16060.1|Name=mRNA_E-siliculosus-1a_M_contig8.16060.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3409bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:317215..320623- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AAACACCTGGATGGCGGGTGGTGCAGTATTGCAGTGAAATTTTCTACAGA CGCATCTCGACCGCCAAATTCGAATCCGTGGGGAGGACAGGGCGGTGAGA CCGACTTGGAGAAAGCACAGCCGCGGGTGGCTGCTGACCTCCTCATTGCT GAAGGAGGGGCACCAAGAAGGCAACTGACAAGGCACTGTGTTCAGTCGTT GGCGATGACGCTGCGCTCATCGAAAAGGGCCGTGAGCATGTAGAAACCAT TCGGGAGCGCGCTTCGAAATGCGGGAAACAGCAGGCAGATGCTGGTGGTG CGGGCGCTGCCGCGGCGTCGGGAAAGGGGAAGCGCAAAGCGGCGGACGCA GCCCTCTCCGACCCACTGGCAGCAGCTCTAGGTGGTGGGAACAGGAGCGG TGCAAAGTCTGAGGAACAGTTGGAGGTTTCGCGGCAGGAGAATGTGAGGT CAGGTTGGTGCGCTTGTTGTGCTGCTGCTGTACTTTGTACTGCTGTACGT GACTCGGTTCCCAACGTCCAAATGCCGAAAGCACATATCTACAAGGACGC TGTGACATGAGCAAGACGCACACATCCGATCTATATGGGCGTGGTTTGTG AGGTGGATTTTCAGGCTTGTTTTAGCTGCTGCTGCTGCTGCTGCGGCTGC TGCATGTCACACTTTCTTTGCGAAACCGATACAAATTGTGGTAGTTGTAG TCCCCCCGCCTGTTTGGTTCGAGGGCTTTGGTCGAGGTAGGGTTTTCTTG TGGCATGGGGCTGTAAAACTGCTGTGGAGGGCATGGGTGTTGGGTATGCG GTATATCCTGTGAGCTTGTGGGCTTTGGTCCTAGATATATAAATGTCCGC TGATACTGGACAGTTCGAACGCCCTATTTAGAGCAACAGCGGTAGTACTG GTACATGTAGTACAAGCTCCACCATGGAACTTTTCTACCTGGAACTTTTC TACCTCAAGTTGTATGAGCAGAATACAATCCAAGTGTATCACACACGAAG TGACGTAGTCGCTGTGTGTGACACTTATTTTTGTTCGAGCGCGCAAAGAT CCCTTGTACTTGAAAGTATGTCGTGCCTGCCGAATGCGAAACGTGTGGTT AGGGGGAATGCCCGATCAACCCTTGGCGTATCTGGTGCGGCACAGCAAAC GCAAGGATGATGGCCAGCTTGAGGTTCCCCCCCAACTCTCCTCCTCGCCG GATACATCAACCGCTGCTGTGCACAAACTGCATTTTCAGGCCTTGGAACA GCGCCGAGCTGGTGCGATGGAGTTGCTCAAGAACGACCCCGTTTTGATGG AACGGGTCCGGTCAATGCTGCGGGCGGGAGCTATGGAAAAGGCAGCGGCT AAGGCAGACACAGTTGACGGCGCGAACACTCGTGCTCTCCAAGCTTCGCT GCAGGCGCTGAAGCGGCACCACACCAGCAGTATCGGTCGCATCGCGTATA CGACGGCACTGGCCGCAGCGGCAGGGGCGAGGGCGCGTACGTGTGATCCA GCCGACCCGTGCCGTCCGGGGGAGCGGTGCGATTCCGTCGAGCCGGGTGG AGTGAGCTTAGCCGAGCGGGCTAGGAGTCTCGAAATTCGGTGCAAAACCT TCGCTGAAGCGCGTTCGCGGATGCACAACACGAACCACGACCTGGCTCCG GAAAAGGCTTTGGCGGACGGCTGCTACATGTACAGCGAGCGCAAGACTAG GAGTGACGCGACGAACCCAGAGGTCATGGCTCTCGCCAGGCTGTGCTGGC ACTCCGACGACGTTTCTCGTCCGACAGGTAGAGCGGTCGGTGGTGTGTTG CGTTGCGCTGCCGCCACGATACGTAGTCTCCTGGCTCTTTCGGCAACTGT TTACTATATTGTATTGCTGCGCTTGACCGCTAGCGGTGCACTGACTACCA CGCGGCGGTACAAATCGAGGGAGATGAGACTTTCATTTAGGGGCAGTGGC ACTAGTTGGGTGCTGGGAGAGAAGGTGCAAGTTCAACCTGCTTCTCGCTA CCAACTCCTGCACAAGCGGCGCAAAGATTTCATTGGTACGGCGGCAGCTT GCGGGTTGGTACAACGGTAGTTTGTTTGGCGCTACTTCTGTCCTGGTGAC GGGCAGGAGCACCCACGGCAGAGTTCCTTCGTTGCCCCGCCCCCTACAGG AAATGGGGAAATTTGCAACGAGTCAAAGAAGAGCGACGCGCCCTCTCACC CCCGGAGACAACTCAAGCACAGGGAGACGACGTGTGGAGGATGTTCCTCG ATAGCCAGCAGTATCTGGCGCTAAAGGCGAAGCTGCTTGGAAAGGACAGC GAGTTCACCGATCCTGGCAGAACGAAGTTCCTGTCCACGCTGTGTGCGTG TTTAGGTGGGTGAACTCAAGGATTGCTTTTTGTTTTACTTGGACGGATAT TGTTCGAGGTAGCGGCATGTGTATCGACAGAAGCGTAAACAGTCTGATTG GATAGTTTGAATGTCGGGACTGTCAAGCTACGAGTCGCTGTGTAGCCAAA TATTATGAGAATATAGTGGAATGTTCTTGGTCCTTTCTCTCTGGCTGTAG GAATGTTCTTCGTGGATAGTACATTAGCCCGAGGATGTGTGATACGTAGG AAAGTGCATTGGTCCGTTCCGTGCACCGGTCCGTGTTCGGTGTATATGCG TGATCGGGTGGATGCCTAAGCGTGATGCTGCTGGGATGCTGTGCACCCAC CCAGCTCACTCTACCTTTTGACCTGTTCTCCTGGTCCAAGGTCTCATCAA TAATACAACATATTTTCCCCAGGAGCCACGAGTTTACCACCAGACATGAG TTCCCCAAGCATTTTAATTTTGCGAGGTTAACAATGTTCGCCTGAGGTAT TGCGGTTGAGGAAACAATACTCACTCCTATGTTTTCCCTCTGTTCGCTTC TGGCTGTTTCCATCTCGCGATGTTGCTTTTCAGTGGAGCCAAGGACGTCA CAGAGTCAGGAGGAAGGGGGAGAGAGGAAGAGCAACACTGTGTCAAGAGA GCACTTACGTATCCCGAAGAGGAGGCTTTCGGAGTCTGTTTAGAGACTTG TCGATTGTCATCCGCGAGAACGGTGTACTCCCATGGTTTCTGTCTTGGGG TTGCAAACAATCTTGTTTGCGGCCTCTGGGTGGCTCTCCAGCGAGCTCTC TACTTGAGGCGAGCGAAGAAAATCTCGCAGCGATGAAATCTTGTACGTGG AGGTCTTTGTTAATTTCTTGTCTGACTATCGTTGTTGCTATCGTTGCAGA TACAACTGCTGTCGTTGTCGTCGTCGTCGCCGTTGTTGTGGTTGGTGTTG TTGTCGTTGCTGTCACTGACACTGCTGTCACTGTAAGCTAGATCTAACTT TTTATTGAACTCAGACCACGACGAAATAGTTCTTGAGAACTGTTCTGCAT GGCGTTTTA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:317215..320623-

>mRNA_E-siliculosus-1a_M_contig8.16060.1 ID=mRNA_E-siliculosus-1a_M_contig8.16060.1|Name=mRNA_E-siliculosus-1a_M_contig8.16060.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1272bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:317215..320623- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGAGTTGCTCAAGAACGACCCCGTTTTGATGGAACGGGTCCGGTCAAT
GCTGCGGGCGGGAGCTATGGAAAAGGCAGCGGCTAAGGCAGACACAGTTG
ACGGCGCGAACACTCGTGCTCTCCAAGCTTCGCTGCAGGCGCTGAAGCGG
CACCACACCAGCAGTATCGGTCGCATCGCGTATACGACGGCACTGGCCGC
AGCGGCAGGGGCGAGGGCGCGTACGTGTGATCCAGCCGACCCGTGCCGTC
CGGGGGAGCGGTGCGATTCCGTCGAGCCGGGTGGAGTGAGCTTAGCCGAG
CGGGCTAGGAGTCTCGAAATTCGGTGCAAAACCTTCGCTGAAGCGCGTTC
GCGGATGCACAACACGAACCACGACCTGGCTCCGGAAAAGGCTTTGGCGG
ACGGCTGCTACATGTACAGCGAGCGCAAGACTAGGAGTGACGCGACGAAC
CCAGAGGTCATGGCTCTCGCCAGGCTGTGCTGGCACTCCGACGACGTTTC
TCGTCCGACAGATGGAGTTGCTCAAGAACGACCCCGTTTTGATGGAACGG
GTCCGGTCAATGCTGCGGGCGGGAGCTATGGAAAAGGCAGCGGCTAAGGC
AGACACAGTTGACGGCGCGAACACTCGTGCTCTCCAAGCTTCGCTGCAGG
CGCTGAAGCGGCACCACACCAGCAGTATCGGTCGCATCGCGTATACGACG
GCACTGGCCGCAGCGGCAGGGGCGAGGGCGCGTACGTGTGATCCAGCCGA
CCCGTGCCGTCCGGGGGAGCGGTGCGATTCCGTCGAGCCGGGTGGAGTGA
GCTTAGCCGAGCGGGCTAGGAGTCTCGAAATTCGGTGCAAAACCTTCGCT
GAAGCGCGTTCGCGGATGCACAACACGAACCACGACCTGGCTCCGGAAAA
GGCTTTGGCGGACGGCTGCTACATGTACAGCGAGCGCAAGACTAGGAGTG
ACGCGACGAACCCAGAGGTCATGGCTCTCGCCAGGCTGTGCTGGCACTCC
GACGACGTTTCTCGTCCGACAGGAAATGGGGAAATTTGCAACGAGTCAAA
GAAGAGCGACGCGCCCTCTCACCCCCGGAGACAACTCAAGCACAGGGAGA
CGACGTGTGGAGGATGTTCCTCGATAGCCAGCAGTATCTGGCGCTAAGAA
ATGGGGAAATTTGCAACGAGTCAAAGAAGAGCGACGCGCCCTCTCACCCC
CGGAGACAACTCAAGCACAGGGAGACGACGTGTGGAGGATGTTCCTCGAT
AGCCAGCAGTATCTGGCGCTAA
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