mRNA_E-siliculosus-1a_M_contig8.16060.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: D8LQL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL8_ECTSI) HSP 1 Score: 346 bits (888), Expect = 1.820e-113 Identity = 184/205 (89.76%), Postives = 190/205 (92.68%), Query Frame = 3
Query: 444 ALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERK-TRSDATNPEVMALARLCWHSDDVSRPTGNGEICNESKKSDAPSHPRRQLKHR 1055
ALEQRRA A+ELL+NDPVLMERVR+MLRAGAMEKAAAKA VDGANTRAL+ASLQALKRHHTS+IGRIAYTTALAA AGA A TCDP DPCRPGERCDSVE GGVSLAERARSLEIRCKTF EARSRMHNTNHDLAPEKALA G YMYSERK T SDATNPEVMALARL HSDDVSRPTGNGEICNESKKSDAPSHPRRQLKH+
Sbjct: 5 ALEQRRACAIELLENDPVLMERVRAMLRAGAMEKAAAKAAAVDGANTRALRASLQALKRHHTSNIGRIAYTTALAATAGAGAHTCDPGDPCRPGERCDSVERGGVSLAERARSLEIRCKTFVEARSRMHNTNHDLAPEKALAGGYYMYSERKKTTSDATNPEVMALARLYCHSDDVSRPTGNGEICNESKKSDAPSHPRRQLKHK 209
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE) HSP 1 Score: 335 bits (860), Expect = 3.110e-105 Identity = 201/319 (63.01%), Postives = 232/319 (72.73%), Query Frame = 3
Query: 153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGNG--EICNESKKSDAPSHPRRQLKHRETTCGGCSSIASSIWR 1103
R+GT +A K + SVV D+ L+EKGREHVE IRERASK GK+Q XXXXXXXX RK ADAALSDPLA A GG RSGA E SR+E E+RR+ AM+L++NDPVLMERVR+ML AGA E+AAAK +D ANTRAL+ASLQALK+H SSIG Y TALA AAGA TC D C PG+RC VE GGVSLAERA SL IR +TF++AR RMHNTNHD+AP+ A ++GCY+Y+ERKTRSD TNPEVMALAR WHSDDVSR TGN ++ ESKK DAPSHPRRQL H+ S+WR
Sbjct: 35 RKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPE----TSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHK----------GDSVWR 339
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 335 bits (860), Expect = 5.830e-101 Identity = 201/319 (63.01%), Postives = 232/319 (72.73%), Query Frame = 3
Query: 153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGNG--EICNESKKSDAPSHPRRQLKHRETTCGGCSSIASSIWR 1103
R+GT +A K + SVV D+ L+EKGREHVE IRERASK GK+Q XXXXXXXX RK ADAALSDPLA A GG RSGA E SR+E E+RR+ AM+L++NDPVLMERVR+ML AGA E+AAAK +D ANTRAL+ASLQALK+H SSIG Y TALA AAGA TC D C PG+RC VE GGVSLAERA SL IR +TF++AR RMHNTNHD+AP+ A ++GCY+Y+ERKTRSD TNPEVMALAR WHSDDVSR TGN ++ ESKK DAPSHPRRQL H+ S+WR
Sbjct: 35 RKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPE----TSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHK----------GDSVWR 339
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5KQS4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQS4_9PHAE) HSP 1 Score: 297 bits (760), Expect = 3.600e-93 Identity = 176/278 (63.31%), Postives = 202/278 (72.66%), Query Frame = 3
Query: 153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGN 986
++GT KA L SVV D+ L EKGREH E I+ERASK G QQA XXXXX RK AD ALSDPLA A GG RSGA E SR+E A E+RR+ A+EL++ D VLMERVR+ML A A ++AAAK V+ ANTRAL+ASLQALKRH SSIG AYTTALA AAGA TC + C PG RC EPGGVS AERA+SL IR +TF++AR RMHNTNHD+AP A++DGCY+Y+ERKTRSD TNPEVMALA+ WHSDDVSR TGN
Sbjct: 35 KKGTTKAAGSKLSSVVADEDQLREKGREHAEAIQERASKRGNQQA--AXXXXXXXSGKGKRKGADVALSDPLALAHDGGTRSGATPE----ASREEQASEERRSSALELIQKDHVLMERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCPDPNLCPPGNRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRATGN 306
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5K647_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K647_9PHAE) HSP 1 Score: 275 bits (702), Expect = 1.030e-84 Identity = 155/241 (64.32%), Postives = 180/241 (74.69%), Query Frame = 3
Query: 333 RKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGNGEICNESKKSDAPSHPRRQLKHR 1055
RK AD ALSDPLA A G RSGA E SR+E A E+RR+ A+EL++ D VLMERVR+ML A A ++AAAK V+ ANTRAL+ASLQALKRH SSIG AYTTALA AAGA TC + C PG+RC EPGGVS AERA+SL IR +TF++AR RMHNTNHD+AP A++DGCY+Y+ERKTRSD TNPEVMALA+ WHSDDVSR + ESKK DAPSHPRRQL H+
Sbjct: 37 RKGADVALSDPLALAHDVGTRSGATPE----ASREEQASEERRSSALELIQKDHVLMERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCSDPNLCHPGKRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRAKN---MYKESKKRDAPSHPRRQLMHK 270
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5JZE2_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE2_9PHAE) HSP 1 Score: 251 bits (640), Expect = 2.590e-75 Identity = 160/282 (56.74%), Postives = 188/282 (66.67%), Query Frame = 3
Query: 153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYM-------------------------YSERKTRSDATNP 923
R+GT +A K + VV D+ L+EKGRE+VE IRERASK GK+Q A XXXXXX K ADAALSDPLA A GG RSGA E SR+E E+RR+ AM+L++NDPVLMERVR+ML AGA E+AAAK +D ANTRAL+ASLQALK+H SS G Y TALA AAGA TC D C PG+RC VE GGVSLAERA SL IR +TF++AR RMHNTNHD+AP+ A+++GCY Y+ERKTRSD TNP
Sbjct: 36 RKGTTEAAGKPVQCVVADEVELLEKGREYVEGIRERASKRGKRQPAAXXXXXXXXXKKAKLKEADAALSDPLALAHDGGTRSGATPE----TSREEADAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSTGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAVSEGCYXXXXXXXXXXXXXXXXXXXXXXXXXXYNERKTRSDVTNP 313
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5KF48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF48_9PHAE) HSP 1 Score: 254 bits (650), Expect = 5.030e-73 Identity = 143/218 (65.60%), Postives = 163/218 (74.77%), Query Frame = 3
Query: 333 RKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSRPTGN 986
RK DAALSDPLA A GG RSGA E V R+E E+RR+ A+EL + D VLMERVR ML A A ++AAAK V+ ANTRAL+ASLQALKRH SSIG AYTTALA AAGA TC + C PG RC EPGGVS AERA+SL IR +TF++AR RMHNTNHD+AP A++DGCY+Y+ERKTRSD TNPEVMALA+ WHSDDVSR TGN
Sbjct: 426 RKGVDAALSDPLALAHDGGTRSGATPE----VLREEQGSEERRSSALELTQKDHVLMERVRVMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCPDPNLCPPGNRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRATGN 639
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5KA34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA34_9PHAE) HSP 1 Score: 234 bits (597), Expect = 2.250e-68 Identity = 147/241 (61.00%), Postives = 171/241 (70.95%), Query Frame = 3
Query: 225 KGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARL 947
K E VE IRERASK GK+Q XXXXXXXX RK ADAALSDPLA A GG RSGA E SR+E E+RR+ AM+L++NDPVLMERVR+ML AGA E+ AA +D ANTRAL+ASLQALK+H SSIG Y TALA A GA TC D C PG+RC VE GGVSLAERA SL IR +TF++AR RMHN NHD+AP+ A+++GCY+Y++RKTRSD T P RL
Sbjct: 14 KASEXVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPE----TSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQVAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAPGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNMNHDIAPKIAVSEGCYVYNDRKTRSDVTIPRSWLSPRL 250
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5JH54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH54_9PHAE) HSP 1 Score: 226 bits (576), Expect = 3.150e-66 Identity = 146/257 (56.81%), Postives = 179/257 (69.65%), Query Frame = 3
Query: 153 RRGTKKATDKALCSVVGDDAALIEKGREHVETIRERASKCGKQQADAGGAXXXXXXXXXXRKAADAALSDPLAAALGGGNRSGAKSEEQLEVSRQENALEQRRAGAMELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNP 923
R+GT +A K + SV D+ L+E GREHVE IRERASK GK+Q XXXXXXXX RK ADAALSDPLA A GG RSGA E SR+E ++RR+ AM+L++NDPVL+ERVR+ML GA E+AAAK +D ANTRAL+ASLQALK+H S +A ++ RA +D C G+RC VE GGVSLAERA SL IR +TF++AR RM+NTNHD+AP+ A ++G Y Y+ERKTRSD TNP
Sbjct: 35 RKGTTEAAGKPMQSVFADEVELLETGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRKGADAALSDPLALAHDGGTRSGATPE----TSREEAVADERRSSAMDLMQNDPVLIERVRAMLDTGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSCRADHFPDSARCSSRSGRAHV---SDVCHAGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMYNTNHDIAPKIAASEGYYEYNERKTRSDVTNP 284
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Match: A0A6H5KQE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE8_9PHAE) HSP 1 Score: 207 bits (526), Expect = 4.440e-59 Identity = 108/158 (68.35%), Postives = 124/158 (78.48%), Query Frame = 3
Query: 501 MERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRHHTSSIGRIAYTTALAAAAGARARTCDPADPCRPGERCDSVEPGGVSLAERARSLEIRCKTFAEARSRMHNTNHDLAPEKALADGCYMYSERKTRSDATNPEVMALARLCWHSDDVSR 974
MERVR+ML A A ++AAAK V+ ANTRAL+ASLQALKRH SSIG AYTTAL AAGA TC + C PG RC EPGGVS AERA+SL IR +TF++AR RMHNTNHD+AP A++DGCY+Y+ERKTRSD TNPEVMALA+ WHSDDVSR
Sbjct: 1 MERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGCTAYTTALTTAAGAGEHTCPDPNLCPPGNRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSR 158 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16060.1 >prot_E-siliculosus-1a_M_contig8.16060.1 ID=prot_E-siliculosus-1a_M_contig8.16060.1|Name=mRNA_E-siliculosus-1a_M_contig8.16060.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=212bp MELLKNDPVLMERVRSMLRAGAMEKAAAKADTVDGANTRALQASLQALKRback to top mRNA from alignment at E-siliculosus-1a_M_contig8:317215..320623- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16060.1 ID=mRNA_E-siliculosus-1a_M_contig8.16060.1|Name=mRNA_E-siliculosus-1a_M_contig8.16060.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3409bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:317215..320623- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:317215..320623- >mRNA_E-siliculosus-1a_M_contig8.16060.1 ID=mRNA_E-siliculosus-1a_M_contig8.16060.1|Name=mRNA_E-siliculosus-1a_M_contig8.16060.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1272bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:317215..320623- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |