mRNA_E-siliculosus-1a_M_contig8.16059.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16059.1 vs. uniprot
Match: D8LQL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL9_ECTSI) HSP 1 Score: 248 bits (633), Expect = 1.260e-74 Identity = 174/277 (62.82%), Postives = 184/277 (66.43%), Query Frame = 1
Query: 496 RLRKRADILVQEERERLLRELNAELDVERKKFEARKPAISEEAYREAKKEQMLTLQKQEQDFRMVLARREFKDLKDAARERLAVAHAQDKEKTLARLRRSLSRGTGHSVSGLQGELWEEAHEKRERALHEGEAAFEHSCRLLRQQSDHNIQASNIHSPRSLMPLGPTAKIGAMGGEAAIAQETALAALREVEANITEEELSRVTSDLEGDRREAETELKRQLHREAARSINVAVEACTSKHKRVQHETTVRAADALRQALDTAGEDEVARTKVALGR 1326
RL KRAD+LVQEER RLLREL+AELDVERKKFEARKPAISEE D+ A A+ E L L L+ H+K RALHEGEAAF HSCRL+RQQSDHNIQA KI AMGGEAAIAQE ALAALREVEA+ITEEELSRVTSDLEGDRREAETELKRQLHREAARSIN+AVEACTSKHKRVQHETTVRAA+ALRQALD AGEDEV RTKVALGR
Sbjct: 9 RLLKRADLLVQEERGRLLRELHAELDVERKKFEARKPAISEEIVA---------------DYDSCNA--------------WAILAYPCMEYALIFL------------------LFCGPHDKG-RALHEGEAAFGHSCRLIRQQSDHNIQA----------------KIDAMGGEAAIAQEIALAALREVEASITEEELSRVTSDLEGDRREAETELKRQLHREAARSINLAVEACTSKHKRVQHETTVRAAEALRQALDAAGEDEVTRTKVALGR 221 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig8.16059.1 >prot_E-siliculosus-1a_M_contig8.16059.1 ID=prot_E-siliculosus-1a_M_contig8.16059.1|Name=mRNA_E-siliculosus-1a_M_contig8.16059.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=662bp MAIQAIQASQQNLCRTLTPQEVVERLNRSLEQELFNLQEALPACNSMAHTback to top mRNA from alignment at E-siliculosus-1a_M_contig8:311270..316951+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig8.16059.1 ID=mRNA_E-siliculosus-1a_M_contig8.16059.1|Name=mRNA_E-siliculosus-1a_M_contig8.16059.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5682bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:311270..316951+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:311270..316951+ >mRNA_E-siliculosus-1a_M_contig8.16059.1 ID=mRNA_E-siliculosus-1a_M_contig8.16059.1|Name=mRNA_E-siliculosus-1a_M_contig8.16059.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3972bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:311270..316951+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |