mRNA_E-siliculosus-1a_M_contig79.16020.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig79.16020.1 vs. uniprot
Match: A0A6H5KLH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH7_9PHAE) HSP 1 Score: 138 bits (347), Expect = 6.730e-30 Identity = 64/95 (67.37%), Postives = 72/95 (75.79%), Query Frame = 1
Query: 1897 PGDNTRGFVGRYNPAGGDCGPYSVGQLATSETPSQAELMGYCRAGVQYVLEHLTKFSDDFWLGDTPEERARSR*DWATKMAKPTEWADIFLMLGI 2181
PGDNTR + RYNP G CGPY+VGQLA+SETPS EL GY GVQYVL++ F DDFW GDTPEERARSR DWA +M +P EWAD LMLG+
Sbjct: 82 PGDNTREYSKRYNPGRGGCGPYAVGQLASSETPSSEELAGYRLGGVQYVLDNPATFGDDFWEGDTPEERARSRQDWARRMLRPREWADYPLMLGM 176 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig79.16020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig79.16020.1 >prot_E-siliculosus-1a_M_contig79.16020.1 ID=prot_E-siliculosus-1a_M_contig79.16020.1|Name=mRNA_E-siliculosus-1a_M_contig79.16020.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=317bp MRRSVAPSKRRGSASPTGSSVQGVGGSGPTPGIVRYSFAPPRPSQPAQQVback to top mRNA from alignment at E-siliculosus-1a_M_contig79:675826..682483- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig79.16020.1 ID=mRNA_E-siliculosus-1a_M_contig79.16020.1|Name=mRNA_E-siliculosus-1a_M_contig79.16020.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6658bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig79:675826..682483- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig79:675826..682483- >mRNA_E-siliculosus-1a_M_contig79.16020.1 ID=mRNA_E-siliculosus-1a_M_contig79.16020.1|Name=mRNA_E-siliculosus-1a_M_contig79.16020.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1902bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig79:675826..682483- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |