mRNA_E-siliculosus-1a_M_contig783.15944.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig783.15944.1
Unique NamemRNA_E-siliculosus-1a_M_contig783.15944.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: E6ZES4_ECTSI (ATP synthase subunit a n=65 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES4_ECTSI)

HSP 1 Score: 459 bits (1182), Expect = 6.320e-163
Identity = 245/249 (98.39%), Postives = 247/249 (99.20%), Query Frame = 1
Query:    1 MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSL FFIFLF+CLS YGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFV+FSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH
Sbjct:    1 MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLTFFIFLFYCLSFYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVVFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 249          
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: A0A089MYN0_PETFA (ATP synthase subunit a n=18 Tax=Ectocarpales TaxID=2877 RepID=A0A089MYN0_PETFA)

HSP 1 Score: 444 bits (1142), Expect = 7.890e-157
Identity = 231/249 (92.77%), Postives = 242/249 (97.19%), Query Frame = 1
Query:    1 MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            MFNSPLEQFQILPLLSFG NLFDFSITNAMITTC+ L FF+F F+CL SY LNCFPTRWQL+LESLY+STAGLIWDS+GP+GQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTS+VLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLL+AH+VPLGVL+ILFGLELAVALIQAYVFTILSCIYINDAI LH
Sbjct:    1 MFNSPLEQFQILPLLSFGVNLFDFSITNAMITTCIGLAFFLFTFYCLLSYNLNCFPTRWQLILESLYVSTAGLIWDSIGPKGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSMVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLLAHIVPLGVLIILFGLELAVALIQAYVFTILSCIYINDAIALH 249          
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: A0A1I9LW45_9PHAE (ATP synthase subunit a n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW45_9PHAE)

HSP 1 Score: 420 bits (1079), Expect = 3.140e-147
Identity = 222/249 (89.16%), Postives = 236/249 (94.78%), Query Frame = 1
Query:    1 MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            M +SPLEQFQILPL SFG NLFDF+ITNAMI+T +SL FFIFLF+CLS YGL+CFPTRWQL+LE LY +TAGLIWDSVG QGQKYFPFLFVIFS ILISN+SGLVPYSFTITSHLIQTMVLALTVFIGV+IIC S HGFHMLSLFLPGGTSI+LAFLL+PIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAW MMGSGGLLLVAH++PLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH
Sbjct:    1 MLSSPLEQFQILPLFSFGMNLFDFTITNAMISTFISLFFFIFLFYCLSLYGLSCFPTRWQLILEGLYTTTAGLIWDSVGLQGQKYFPFLFVIFSSILISNLSGLVPYSFTITSHLIQTMVLALTVFIGVIIICVSKHGFHMLSLFLPGGTSIILAFLLIPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWTMMGSGGLLLVAHIIPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 249          
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: ATP6_PYLLI (ATP synthase subunit a n=2 Tax=Pylaiella littoralis TaxID=2885 RepID=ATP6_PYLLI)

HSP 1 Score: 415 bits (1066), Expect = 2.900e-145
Identity = 224/249 (89.96%), Postives = 234/249 (93.98%), Query Frame = 1
Query:    1 MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            MFNSPLEQF+ILPLLSFGANLFDFSITNAM+TTCVSL FF+FLF+CL SYGLN FPTRWQLVLE LY STAGL+WDSVGP+  K FPFLFVIFSFILISNV GLVPYSFTITSHLIQTMVLALTVFIGV+II    HGFHMLSLFLPGGTSIVLAFLLVPIEIVSY+FKPLSLAVRLFANMMAGHTLLKVIA  AWAMMGSGGLLL+AH+VPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH
Sbjct:    1 MFNSPLEQFEILPLLSFGANLFDFSITNAMLTTCVSLSFFLFLFYCLFSYGLNSFPTRWQLVLEGLYTSTAGLVWDSVGPRRPKVFPFLFVIFSFILISNVQGLVPYSFTITSHLIQTMVLALTVFIGVIIIV-LAHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYVFKPLSLAVRLFANMMAGHTLLKVIAAVAWAMMGSGGLLLIAHIVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 248          
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: A0A343C631_FUCDI (ATP synthase subunit a n=3 Tax=Fucus TaxID=3011 RepID=A0A343C631_FUCDI)

HSP 1 Score: 405 bits (1040), Expect = 2.740e-141
Identity = 213/249 (85.54%), Postives = 231/249 (92.77%), Query Frame = 1
Query:    1 MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            MF SPLEQFQILP  SFG  LFDFSITNAMITT + L FF+F+ +CLS Y  +CFP RWQL++E LY++TAGLIWDS+GP GQKYFPF+F+IFSFILISNVSGLVPYSFTITSHLIQTMVLAL+VFIGV+IIC STHGFHMLSLFLPGGTS+ LAFLLVPIEIVSY+FKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLL+AH+VPL VLVILFGLELAVALIQAYVFTILSCIYINDAIVLH
Sbjct:    1 MFFSPLEQFQILPFFSFGIALFDFSITNAMITTFLGLGFFLFVHYCLSVYSFSCFPNRWQLLIEGLYLTTAGLIWDSIGPAGQKYFPFIFMIFSFILISNVSGLVPYSFTITSHLIQTMVLALSVFIGVVIICASTHGFHMLSLFLPGGTSLTLAFLLVPIEIVSYVFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLLAHIVPLVVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 249          
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: A0A8F0FD27_9PHAE (ATP synthase subunit a n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0FD27_9PHAE)

HSP 1 Score: 400 bits (1029), Expect = 1.300e-139
Identity = 209/249 (83.94%), Postives = 229/249 (91.97%), Query Frame = 1
Query:    1 MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            MF SPLEQFQILPLLS G  LFDFSITNA I T ++L  F  + +CLS+YG NCFP+RWQLVLES Y++TAGLIWDSVGPQGQKYFPF+F IFSF+LISNVSGLVPYSFTITSHL+QTMVLAL VFIGV+IICGSTHGFHM+SLFLPGGTS+ LAFLLVPIEIVSY+FKP+SLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLL+AH++PL VLVILFGLEL VA IQAYVFTILSCIYINDA+VLH
Sbjct:    1 MFFSPLEQFQILPLLSIGVGLFDFSITNATIATSLALGLFFLIDYCLSAYGFNCFPSRWQLVLESFYLTTAGLIWDSVGPQGQKYFPFIFAIFSFVLISNVSGLVPYSFTITSHLVQTMVLALMVFIGVVIICGSTHGFHMVSLFLPGGTSLPLAFLLVPIEIVSYVFKPISLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLIAHMLPLVVLVILFGLELGVAFIQAYVFTILSCIYINDALVLH 249          
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: A0A0U1WNN5_SARFS (ATP synthase subunit a n=24 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNN5_SARFS)

HSP 1 Score: 396 bits (1018), Expect = 6.150e-138
Identity = 210/249 (84.34%), Postives = 229/249 (91.97%), Query Frame = 1
Query:    1 MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            MF SPLEQFQILP +  G  LFD SITNAMITT  SL F +F+++CLS +GL+CFP+RWQL+LE LY++TAGLIWDS+G  GQKYFPF+F+IFSFILISNVSGLVPYSFTITSHLIQTMVLAL VFIGV++IC STHGFHMLSLFLPGGTS+ LAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLL+AHVVPL VL+ILFGLELAVALIQAYVFTILSCIYINDAI LH
Sbjct:    1 MFFSPLEQFQILPFVDLGIGLFDLSITNAMITTVFSLGFILFVYYCLSVFGLSCFPSRWQLLLERLYLTTAGLIWDSIGLHGQKYFPFIFMIFSFILISNVSGLVPYSFTITSHLIQTMVLALGVFIGVVLICASTHGFHMLSLFLPGGTSLPLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLIAHVVPLLVLIILFGLELAVALIQAYVFTILSCIYINDAIALH 249          
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: A0A4Y5T8Z6_9PHAE (ATP synthase subunit a n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8Z6_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 3.060e-122
Identity = 188/246 (76.42%), Postives = 212/246 (86.18%), Query Frame = 1
Query:   10 SPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            SPLEQF ILPLLS      DFSITNA++T+ +SL     L+F LS +GL   P RWQL+LESLY + AGLIWDSVG +GQKYFPF+F IF F+L+SNVSGL PYSFT TSHL+QTMVLA TVFIGVMIIC   HGFHMLSLFLPGGTS+ LAFLLVPIEI+SY+FKP+SLAVRLFANMMAGHTLLKVI GFAW+M+GSGGLLL+ H+VPL VLV+LFGLELAV+LIQAYVFTILSCIYINDA+VLH
Sbjct:    5 SPLEQFSILPLLSLSVTFIDFSITNAVLTSLISLGSAWCLYFLLSVFGLTIVPVRWQLILESLYETAAGLIWDSVGARGQKYFPFIFSIFLFVLLSNVSGLAPYSFTTTSHLVQTMVLAYTVFIGVMIICAGVHGFHMLSLFLPGGTSLGLAFLLVPIEIISYVFKPVSLAVRLFANMMAGHTLLKVIVGFAWSMIGSGGLLLIVHIVPLAVLVVLFGLELAVSLIQAYVFTILSCIYINDALVLH 250          
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: Q2TUB2_DICDH (ATP synthase subunit a n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUB2_DICDH)

HSP 1 Score: 347 bits (891), Expect = 1.370e-118
Identity = 185/246 (75.20%), Postives = 208/246 (84.55%), Query Frame = 1
Query:   10 SPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            SPLEQF I+P+LSFG    D SITNA++T+ VSL      +  L  + L   PTRWQL+ E LY   AGLIWDSVGP+GQKYFPF+F IF F+L+SNVSGL PYSFT TSHLIQT+VLA TVFIGVMIIC   HGFHMLSLFLPGGTS+ LAFLLVPIE++SYIFKP+SLAVRLFANMMAGHTLLKVI GFAWAM+GSGGLLL+ H+VPL VLV+LFGLELAV+LIQAYVFTILSCIYINDA+VLH
Sbjct:    5 SPLEQFSIIPILSFGVLFLDISITNAVLTSFVSLGAIWSFYSMLVIFDLTIVPTRWQLIFEGLYEVAAGLIWDSVGPRGQKYFPFIFTIFFFVLVSNVSGLAPYSFTTTSHLIQTLVLAYTVFIGVMIICAGVHGFHMLSLFLPGGTSLGLAFLLVPIEVISYIFKPVSLAVRLFANMMAGHTLLKVIVGFAWAMVGSGGLLLIVHLVPLLVLVVLFGLELAVSLIQAYVFTILSCIYINDALVLH 250          
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Match: A0A7S6UA32_9STRA (ATP synthase subunit a n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA32_9STRA)

HSP 1 Score: 300 bits (769), Expect = 4.130e-100
Identity = 169/249 (67.87%), Postives = 197/249 (79.12%), Query Frame = 1
Query:    1 MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSYGLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISNVSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGTSIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMGSGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH 747
            M NSPLEQFQILP++S    L D  ITNA     +S+  F FL  CL+ YGL+  P  WQ  +ESLY + +GL+ D+VG +GQKYFPFLF +F F+L+SN+ GLVPYSFT TSHLIQTM LAL VFIGV IIC S HGFHM+SLF P GTS+ LAFLLVPIEIVSY+F+P+SLAVRLFANMMAGHTLLKVI GFAWAMMG G  L +AH +PL +LV+L GLE+ VA+IQAYVFTILS IY+NDAI LH
Sbjct:    1 MLNSPLEQFQILPIISLP--LVD--ITNAFAICGLSIGCFFFLHTCLNIYGLSFIPKAWQSFVESLYEAVSGLVLDTVGKEGQKYFPFLFSLFCFVLLSNLLGLVPYSFTTTSHLIQTMTLALMVFIGVNIICLSIHGFHMVSLFYPPGTSLGLAFLLVPIEIVSYLFRPISLAVRLFANMMAGHTLLKVIGGFAWAMMGGGTFLFLAHFLPLIILVLLMGLEMGVAIIQAYVFTILSTIYLNDAIKLH 245          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig783.15944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZES4_ECTSI6.320e-16398.39ATP synthase subunit a n=65 Tax=Phaeophyceae TaxID... [more]
A0A089MYN0_PETFA7.890e-15792.77ATP synthase subunit a n=18 Tax=Ectocarpales TaxID... [more]
A0A1I9LW45_9PHAE3.140e-14789.16ATP synthase subunit a n=1 Tax=Pleurocladia lacust... [more]
ATP6_PYLLI2.900e-14589.96ATP synthase subunit a n=2 Tax=Pylaiella littorali... [more]
A0A343C631_FUCDI2.740e-14185.54ATP synthase subunit a n=3 Tax=Fucus TaxID=3011 Re... [more]
A0A8F0FD27_9PHAE1.300e-13983.94ATP synthase subunit a n=1 Tax=Analipus japonicus ... [more]
A0A0U1WNN5_SARFS6.150e-13884.34ATP synthase subunit a n=24 Tax=Sargassaceae TaxID... [more]
A0A4Y5T8Z6_9PHAE3.060e-12276.42ATP synthase subunit a n=1 Tax=Dictyopteris divari... [more]
Q2TUB2_DICDH1.370e-11875.20ATP synthase subunit a n=1 Tax=Dictyota dichotoma ... [more]
A0A7S6UA32_9STRA4.130e-10067.87ATP synthase subunit a n=1 Tax=Schizocladia ischie... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig783contigE-siliculosus-1a_M_contig783:6286..7035 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size750
Model size750
Exons1
Hectar predicted targeting categorysignal anchor
BRITEko00000,ko00001,ko00002,ko03029
Best eggNOG OGNA|NA|NA
Best tax levelChlorophyta
COG Functional cat.C
EggNOG OGs34IHJ@3041,37J5M@33090,COG0356@1,KOG4665@2759
EggNOG free text desc.ATP synthase A chain
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0016020,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464
KEGG ModuleM00158
KEGG Pathwayko00190,ko01100,ko04714,ko05010,ko05012,ko05016,map00190,map01100,map04714,map05010,map05012,map05016
KEGG TC3.A.2.1
KEGG koko:K02126
Preferred nameatp6
Seed eggNOG ortholog70448.Q0P3G1
Seed ortholog evalue3.2e-53
Seed ortholog score215.3
Taxonomic scopeViridiplantae
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936129.3616068-CDS-E-siliculosus-1a_M_contig783:6285..70351622936129.3616068-CDS-E-siliculosus-1a_M_contig783:6285..7035Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig783 6286..7035 +
1696250942.005956-CDS-E-siliculosus-1a_M_contig783:6285..70351696250942.005956-CDS-E-siliculosus-1a_M_contig783:6285..7035Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig783 6286..7035 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig783.15944.1prot_E-siliculosus-1a_M_contig783.15944.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig783 6286..7035 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig783.15944.1

>prot_E-siliculosus-1a_M_contig783.15944.1 ID=prot_E-siliculosus-1a_M_contig783.15944.1|Name=mRNA_E-siliculosus-1a_M_contig783.15944.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=250bp
MFNSPLEQFQILPLLSFGANLFDFSITNAMITTCVSLIFFIFLFFCLSSY
GLNCFPTRWQLVLESLYISTAGLIWDSVGPQGQKYFPFLFVIFSFILISN
VSGLVPYSFTITSHLIQTMVLALTVFIGVMIICGSTHGFHMLSLFLPGGT
SIVLAFLLVPIEIVSYIFKPLSLAVRLFANMMAGHTLLKVIAGFAWAMMG
SGGLLLVAHVVPLGVLVILFGLELAVALIQAYVFTILSCIYINDAIVLH*
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mRNA from alignment at E-siliculosus-1a_M_contig783:6286..7035+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig783.15944.1 ID=mRNA_E-siliculosus-1a_M_contig783.15944.1|Name=mRNA_E-siliculosus-1a_M_contig783.15944.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=750bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig783:6286..7035+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTTTAATAGTCCCTTAGAACAATTTCAAATACTTCCTTTGTTAAGTTT TGGTGCGAATCTATTTGATTTCTCTATAACTAACGCAATGATAACCACTT GTGTAAGTTTAATTTTTTTTATTTTTTTATTTTTTTGTTTATCTTCTTAT GGTTTAAATTGTTTCCCAACAAGATGGCAATTGGTCTTAGAAAGCTTATA TATTAGTACAGCAGGTTTAATATGGGATAGTGTGGGCCCGCAAGGACAAA AATATTTTCCATTTTTATTTGTAATCTTTAGTTTTATCTTAATCTCAAAT GTATCTGGACTTGTTCCATATTCTTTTACCATAACTAGCCATCTTATTCA AACAATGGTTTTAGCTCTTACAGTGTTTATTGGTGTTATGATTATTTGTG GTTCTACCCATGGTTTTCATATGCTAAGCTTATTTCTTCCAGGAGGTACT TCAATTGTTTTGGCTTTCTTACTTGTACCAATAGAAATAGTTTCTTATAT CTTTAAGCCTCTTAGTCTTGCTGTTCGTCTTTTTGCTAACATGATGGCAG GACATACTTTGCTTAAGGTAATTGCTGGCTTTGCTTGGGCTATGATGGGA AGTGGTGGCTTATTATTAGTAGCTCATGTTGTACCTTTAGGAGTTCTAGT TATTCTTTTTGGTCTTGAATTGGCGGTTGCTTTAATTCAAGCTTATGTGT TTACAATTTTAAGTTGTATATACATAAATGATGCTATAGTTCTTCATTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig783:6286..7035+

>mRNA_E-siliculosus-1a_M_contig783.15944.1 ID=mRNA_E-siliculosus-1a_M_contig783.15944.1|Name=mRNA_E-siliculosus-1a_M_contig783.15944.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1500bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig783:6286..7035+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTTTAATAGTCCCTTAGAACAATTTCAAATACTTCCTTTGTTAAGTTT
TGGTGCGAATCTATTTGATTTCTCTATAACTAACGCAATGATAACCACTT
GTGTAAGTTTAATTTTTTTTATTTTTTTATTTTTTTGTTTATCTTCTTAT
GGTTTAAATTGTTTCCCAACAAGATGGCAATTGGTCTTAGAAAGCTTATA
TATTAGTACAGCAGGTTTAATATGGGATAGTGTGGGCCCGCAAGGACAAA
AATATTTTCCATTTTTATTTGTAATCTTTAGTTTTATCTTAATCTCAAAT
GTATCTGGACTTGTTCCATATTCTTTTACCATAACTAGCCATCTTATTCA
AACAATGGTTTTAGCTCTTACAGTGTTTATTGGTGTTATGATTATTTGTG
GTTCTACCCATGGTTTTCATATGCTAAGCTTATTTCTTCCAGGAGGTACT
TCAATTGTTTTGGCTTTCTTACTTGTACCAATAGAAATAGTTTCTTATAT
CTTTAAGCCTCTTAGTCTTGCTGTTCGTCTTTTTGCTAACATGATGGCAG
GACATACTTTGCTTAAGGTAATTGCTGGCTTTGCTTGGGCTATGATGGGA
AGTGGTGGCTTATTATTAGTAGCTCATGTTGTACCTTTAGGAGTTCTAGT
TATTCTTTTTGGTCTTGAATTGGCGGTTGCTTTAATTCAAGCTTATGTGT
TTACAATTTTAAGTTGTATATACATAAATGATGCTATAGTTCTTCATTAA
ATGTTTAATAGTCCCTTAGAACAATTTCAAATACTTCCTTTGTTAAGTTT
TGGTGCGAATCTATTTGATTTCTCTATAACTAACGCAATGATAACCACTT
GTGTAAGTTTAATTTTTTTTATTTTTTTATTTTTTTGTTTATCTTCTTAT
GGTTTAAATTGTTTCCCAACAAGATGGCAATTGGTCTTAGAAAGCTTATA
TATTAGTACAGCAGGTTTAATATGGGATAGTGTGGGCCCGCAAGGACAAA
AATATTTTCCATTTTTATTTGTAATCTTTAGTTTTATCTTAATCTCAAAT
GTATCTGGACTTGTTCCATATTCTTTTACCATAACTAGCCATCTTATTCA
AACAATGGTTTTAGCTCTTACAGTGTTTATTGGTGTTATGATTATTTGTG
GTTCTACCCATGGTTTTCATATGCTAAGCTTATTTCTTCCAGGAGGTACT
TCAATTGTTTTGGCTTTCTTACTTGTACCAATAGAAATAGTTTCTTATAT
CTTTAAGCCTCTTAGTCTTGCTGTTCGTCTTTTTGCTAACATGATGGCAG
GACATACTTTGCTTAAGGTAATTGCTGGCTTTGCTTGGGCTATGATGGGA
AGTGGTGGCTTATTATTAGTAGCTCATGTTGTACCTTTAGGAGTTCTAGT
TATTCTTTTTGGTCTTGAATTGGCGGTTGCTTTAATTCAAGCTTATGTGT
TTACAATTTTAAGTTGTATATACATAAATGATGCTATAGTTCTTCATTAA
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