mRNA_E-siliculosus-1a_M_contig77.15850.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE) HSP 1 Score: 1211 bits (3133), Expect = 0.000e+0 Identity = 731/844 (86.61%), Postives = 749/844 (88.74%), Query Frame = 1
Query: 283 MHEAVRQTLAMSKSEV--RRRDPARTXXXXXXXXXXXXXXXXXXPKVMATCSPSAALCCGILLLLPTATTRVAALTEITNVAAPTSNLTAGTYHAVGWVYSTDTGAWGTTGDLRPFEIELRSCGGDAAQQAECGLGESCGNPYRALCDLETGAACMDSDGSYDVLIPEDVDAGRYVFSVTHLGLSSWTSGASSTSDSGSVTGCSESFFVEEAAAKEVLAAEAPAASSLQPGDAFTAEWEYEGTDGETDGSFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVKRVFTGEEACSAEAFAVEVAASDSSSGTRAISTPXXXXXXXXXXXTPAPVVSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAAESAPVPLATSSAMESGEIPGTPPTPVPPRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDEDVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSSPTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXX--SSDVAEVEPYTGINERNFL 2802
MHEAVR TLA KSEV RRRDPA T PKV+ TCSPSAALCCGILLLLPTA TRVAALTEITNVAAP SNLTAGTYH VGWVYSTDTGAWGTTGDLRPFEIELRSCGGD AQQAECGLGE CGN Y ALCDLE GAACMDSDGSYDVLIPEDVDAGRYVFSVTHLGLSSWTSGASSTSD+G VTGCSESFFVEEAAAK+VLA EAPAASSLQPGDAFTAEWEYEG DGE +G FEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVKRV T EEACSAE F VE AASDSSSGTRA+STP XXXXXXXXXXTPAPV+SST XXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAE+APVP ATSSA ESGEIPGTPPTPVP RVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQD DVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVM EVMGT+AEGGDSDKILLSSSPT+YFRIRGAGGHLYFYQTEVTSWVEEDLAPH LPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVI+SIISYLGYEATESYGLSWKVRGLC DLSN+DTLF+SVRVYGD+++S+IYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TSHTLVTENTLNDNKYG+RL+V SSDVAEV PYTGINERNF
Sbjct: 1 MHEAVRHTLATLKSEVKGRRRDPAPTTAAAGACFSSRRRLRPLLPKVVTTCSPSAALCCGILLLLPTAITRVAALTEITNVAAPRSNLTAGTYHTVGWVYSTDTGAWGTTGDLRPFEIELRSCGGDDAQQAECGLGELCGNEYLALCDLERGAACMDSDGSYDVLIPEDVDAGRYVFSVTHLGLSSWTSGASSTSDAGLVTGCSESFFVEEAAAKDVLATEAPAASSLQPGDAFTAEWEYEGVDGEANGRFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVKRVSTDEEACSAEYFVVEAAASDSSSGTRAVSTPAXXXXXXXXXXTPAPVISSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------AAEAAPVPSATSSATESGEIPGTPPTPVPLRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDADVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMFEVMGTEAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHMLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLVETSHTLVTENTLNDNKYGVRLVVGSNDNTVRVTTNSVSSNRQHDLYLYIGSSSDVAEVAPYTGINERNFF 836
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI) HSP 1 Score: 936 bits (2420), Expect = 0.000e+0 Identity = 573/707 (81.05%), Postives = 586/707 (82.89%), Query Frame = 1
Query: 904 EEAAAKEVLAAEAPAASSLQPGDAFTAEWEYEGTDGETDGSFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVKRVFTGEEACSAEAFAVEVAASDSSSGTRAISTPXXXXXXXXXXXTPAPVVSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAAESAPVPLATSSAMESGEIPGTPPTPVPPRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDEDVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSSPTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVAEVEPYTGINERNFLSENDVVGTAKYPVSVADSSETTLSDNFFLGSGAFSFTRSDETRLWNNTGGAADSTPYVEDSCFTADSGLSPECT 3024
+EAAAKEVLA EAPAASSLQPGDAFTAEWEYEG DGET+G+FEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQ IPGTPPTPVPPRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVK QD DVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVM EVMGTQAEGGDSDKILLSSSPT+YFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVI+SIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGD+QDS+IYGLWYGHYSYGHLGG+WTNNFMHDNHVYGFDPHDDSDYLTITGNTCYN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVA+VEPYTGINERNFLSEN+V+GTA +PVSVADSSETTLSDNFFLGSGAFSFTRSDETRLWNN GGAADSTPYVEDSCFTADSG+SPECT
Sbjct: 118 QEAAAKEVLAVEAPAASSLQPGDAFTAEWEYEGADGETNGNFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQ----------------------------------------------------------------------------------------------------------------IPGTPPTPVPPRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKAQDADVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMFEVMGTQAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVADVEPYTGINERNFLSENNVMGTANFPVSVADSSETTLSDNFFLGSGAFSFTRSDETRLWNNEGGAADSTPYVEDSCFTADSGVSPECT 712
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI) HSP 1 Score: 469 bits (1207), Expect = 5.180e-147 Identity = 381/858 (44.41%), Postives = 480/858 (55.94%), Query Frame = 1
Query: 517 VAAPTSNLTAGTYHAVGWVYSTDTGAWGTTGDLRPFEIELRSCGGDAAQQAECGLGESCGNPYRALCDLETGAACMDSDGSYDVLIPEDVDAGRYVFSVTHLGLSSWTSGASSTSDSGSVTGCSESFFVEEAAAKEVLA----------AEAPAASS--LQPGDAFTAEWEYEGTDGETDGSFEVNLFSCADQ-ACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVKRVF-TGEEACSAEAFAVEVAASDSSSGTRAISTPXXXXXXXXXXXTPAPVVSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAAESAPVPLATSSAMESGEI-----PGTPPTPVPPRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDEDVQE-LLYPADPTTGEA-DTTGGAATGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSSPTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEG-QTCDGVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVAEVEPYTGINERNFLSENDVVGTAKYPVSVADSSETTLSDNFFLGSGAFSFTRSDETRLWNNTGGAADST-PYVEDSCFTADSGLSPEC 3021
V+ P ++ AG + + Y TD+G GTTGDL F+IELRS D+A A G G+ +LC E C DSDGSYDV IPED +AG+Y + +D SV C+++F V ++ LA E AASS L+ G AFT+ W Y+ G G+FE+NL +C D+ ACE CGT GCYDPG GDYDV +PAD G +KL+V T +C+A +F V A P TPAP XXXXXXXXXXXXXXXXXXXXXXX +++ S PV PG PPTPVP +V CD +A ++F Y LE T PL+T++H S DR E GC + L++W+ T+ DV +L D TT A + T TG+WLL TSV +TNGV E+ GT GGD D++ SS+ + RI G GG++ T V SW H L D + G RS+I C+SE++ + +TCDG A+ + GECRMD++DS ++Y GY+ TESYG++WKVRGLC DLSN+DTLFDSVRVYGDM++S+IYG+WYGHYSYGHLGGVWT+N MHDNHVYGFDPHDDSDYLTI+GNTCYN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TS+ +V++N DN++G R+++ +V EVEP+TGIN N + F SD T + +NTG AA + +SCFTA+S +P C
Sbjct: 11 VSTPANSKEAGETFGLSFAY-TDSG--GTTGDLTSFDIELRSH--DSAD-ATTGCGDEA---LASLCTREAAGVCSDSDGSYDVQIPEDAEAGKYSIKIM-------------LADDDSVYACTDAFNVTRPTGEDGLAILAGEASVSEVEVEAASSTYLEQGAAFTSRWVYDDGGGAGGGTFEINLNACGDEGACENGGCGTFSTAXXXXXGCYDPGTGDYDVTVPADQAVGEYKLEVVSADDTDVSSCTASSFLV----------VEAGGAPAVSPTETPVDETPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------SSSSSEPVAXXXXXXXXXXXXXXXGSPGFPPTPVPDKVVCDDSAELSFVYTLE-DTKRPLVTVAHASGDRSEAGCLTLTKLYDWLATEPADVPTGMLLTVDSTTETAVNGTTATPTGIWLLDTSVVITNGVTFEIKGTSI-GGDCDELKFSSTKKAWNRIMGHGGNIDIDSTVVRSWDASKTLDHILKDSDD-GTTNRSFIACVSEVVVDADETCDGTAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSNCVVSDNEFTDNRWGFRIILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDN----------------------------------TYRFLNSDNTHVVDNTGDAASGELDDITNSCFTAESNRTPVC 785
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE) HSP 1 Score: 313 bits (803), Expect = 1.460e-92 Identity = 159/309 (51.46%), Postives = 212/309 (68.61%), Query Frame = 1
Query: 1531 PGTPPTPVPPRVTCDPAAVVAFSYKLETSTLLP--LITISHESEDRDEGGCTNFSGLWEWVKTQDEDVQ-ELLYPADPTTGEADTTGGAA---TGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSSPTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCD-GVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMH---DNHVYGFDPHDDSDYLTITGNTCYN 2427
PG PP PVP + CDPAA ++F+Y + L+TI H S DR E GC + +W+W+++ E V +LLYP DP TG A TT TGVWL+RTS+ V+NGV + + GT GGD D++ + SSPT +RG GG+L Y+T + SW E L H L DD+ G EPRSYI C SE++ E TCD G A++++GECRMD++DS + ++GY A+ESYG++WKVRG C D+SN + +FD+V VYGD+ + +I+ +WYG YSYGH GGVWT++ MH DN+VYGFDPHDDSDYLTI NT +N
Sbjct: 97 PGVPPIPVPAKTVCDPAAELSFTYDAREDEEIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTSV-GGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDST-GDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWN 402
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI) HSP 1 Score: 292 bits (748), Expect = 3.180e-84 Identity = 144/271 (53.14%), Postives = 192/271 (70.85%), Query Frame = 1
Query: 1630 LITISHESEDRDEGGCTNFSGLWEWVKTQDEDVQ-ELLYPADPTTGEADTTGGAA---TGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSSPTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCD-GVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYN 2427
L+TI H S DR E GC + +W+W+++ E V +LLYP DP TG A TT TGVWL+RTS+ V+NGV + + GT GGD D++ + SS T +RG GG+L Y+T + SW E L H L DD+ G EPRSYI C SE++ E TCD G A++++GECRMD++DS + ++GY A+ESYG++WKVRG C D+SN + +FD+V VYGD+ + +I+ +WYG YSYGH GGVWT++ MHDN+VYGFDPHDDSDYLTI NT +N
Sbjct: 67 LVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTSV-GGDCDELKIRSSTTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDST-GDEPRSYIACTSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWN 334
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 230 bits (587), Expect = 1.200e-62 Identity = 122/255 (47.84%), Postives = 153/255 (60.00%), Query Frame = 1
Query: 1663 DEGGCTNFSGLWEWVKTQDEDVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSSPTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYN 2427
D GGC S L+ W + + + D T TG WLL + VT G L G G ++ + S+S +D+F IRG GG+LYF T VTSW + P D RS+I C+SE+L TC A GECRMD+IDS + YLGY+A+E+YG++WKVRG C+DLSN D +FD V VYGDM+ S+I+ ++YG YS+GH GGVWTNN MHDNH YGFDPHDDSDYL I GN YN
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG------RSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPD-VFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYN 251
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: D7FMJ0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ0_ECTSI) HSP 1 Score: 233 bits (593), Expect = 6.760e-61 Identity = 207/663 (31.22%), Postives = 284/663 (42.84%), Query Frame = 1
Query: 598 GTTGDLRPFEIELRSCGGDAAQQAECGLGESCGNPYRALCDLETGAACMDSDGSYDVLIPEDVDAGR-----------------YVFSVTH--------LGLSSWTSGASSTSDSGSVTGCSESFFVEEA----AAKEVLAAEAPAASSLQ------------PGDAFTAEWEYEGTDGETDGSFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVK---RVFTGEEACSAEAFAVEVAASDSSSGTRAISTPXXXXXXXXXXXTPAPVVSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAAESAPVPLATSSAMESGEIPGTP---PTP---------VPPRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDEDVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSSPTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEIL-EEGQTCDGVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGN 2415
G G F+I L CG A CG + CG + +CD+ GA CMD G+Y + +P ++ AG FS+ + + + G D S VEE+ A + LA+ + +S Q D A W ++ G T F ++L+ C + CG +VA LC EA C D G V +P + +K++V R+ +CS + E+ D TP+P V ++ P P T+ +E ++P P PT P + CD V Y T+ + + + + GGC + +WE LYP +P T E TGVWLL + VT+GV+L+V GT GGD D++ L S T + +R GG F T+V SW E T +D RSYI +SE++ + QTC+G AK E GE RMDVIDS I++LGY +ESYGL+WKVRG C D SN D +FD V VYGDM +SNI+ ++GHYSYGH GG W+ N MH+N YGFDPHDDSDYL I GN
Sbjct: 39 GNGGSQGRFDIALYECG-----DAFCGQ-QDCGTFLQEICDMP-GAGCMDGSGTYRMTVPAELPAGNGYKIRVGLHDSSLYDCSSTFSIIRTIPIPSMEVYVPTVVDGGEGNLDGYGGDDDDASLTVEESLSYTAGRRGLASSSSTSSDPQLYDEGTTAGFAAANDTIMASWSFDDGLGRTFARFNIDLYYCGGGCSITEDCGEIVARLC-EA-CPD-SDGSEMVTLPNVYSSHNYKIRVSTSSRIRRPGSSCSPK---FEIRGKD-----------------RPLYSTPSPTV------------------------------------LYDSSDVSLYPRPPVTAPPVE--DLPSEPVVLPTIWPDWGEENYAPEQPGCDSIDVPQVRYASTTARI-------YVEQATNRGGCFTLTEIWE-------SGSRPLYPLEPATNER---VDYVTGVWLLTEELYVTDGVILQVHGTD-RGGDCDELRLLSDETTFINLRAHGGSFSFLGTKVVSWNEGKGTVDTNHEDG------RSYISAVSEVIYDPNQTCNGTAKSEMGEARMDVIDSEIAFLGYYESESYGLTWKVRGFCIDKSNLD-VFDFVNVYGDMINSNIHDNYFGHYSYGHQGGNWSYNKMHENVEYGFDPHDDSDYLHIVGN 608
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 221 bits (562), Expect = 3.500e-60 Identity = 112/216 (51.85%), Postives = 151/216 (69.91%), Query Frame = 1
Query: 1762 GEADTTGGAATGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSS-PTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTI 2406
G T+ + T WLL + + VT+G + +G++ EGGD D++ + S+ P D++ +RG GG +YF T VTSW P+ P + G RS++ C+SE L G+TCDG AK + GECRMD+I+S + Y+G+ ESYGL+WKVRG C DLSN D +F++ VYGD+++SNI+ ++YG YSYGH GGVWTNN MHDNH YGFDPHDDSDYLTI
Sbjct: 6 GNKITSPTSVTKKWLLESELYVTDGAIFYCIGSE-EGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWD----TPNKKPQETYEGG--RSFLNCVSEKLT-GETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPD-VFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTI 212
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 207 bits (528), Expect = 6.630e-56 Identity = 126/287 (43.90%), Postives = 166/287 (57.84%), Query Frame = 1
Query: 1570 CDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDEDVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSSPTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEIL-EEGQTCDGVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYN 2427
CD V+ Y T L S + E R GGC +WE + + LY DP +G TG WLL + V +G+ L+V GT EGGD+D++ L S+ Y +R GG L F T+V SW D + ++ PD+ E + RSYI +SEI+ +E +TC+G AK GE RMD+ +S I YLG++ +ESYGL+WKVRG C D SN +FD V VYG+M DS+I+ + +G Y+YGH G W N MHDN YGFDPHDDSD+LTI N YN
Sbjct: 42 CDSDIAVSIRYASSTKRLY---LESADGETR--GGCVTLGQIWE-----NRAGKAPLYAVDPESGNESEN---ETGTWLLTEELYVEDGITLKVYGT-GEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSW---DTSTNS-PDEDE--TDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPG-IFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYN 307
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 211 bits (536), Expect = 1.670e-55 Identity = 157/492 (31.91%), Postives = 224/492 (45.53%), Query Frame = 1
Query: 1558 PRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDEDVQELLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMLEVMGTQAEGGDSDKILLSSSPTDYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEIL-EEGQTCDGVAKKERGECRMDVIDSIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDMQDSNIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTS--HTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVAEVEPYTGINERNFLSENDVVGTAKYPVSVADSSETTLSDNFFLGSGAFSFTRSDETRLWNNTGGAADSTPYVEDSCF---TADSGLSP 3015
P+ CD + V+ Y E++ L + R GGC +WE Q D L Y DP +G+ +ATG WLL + V +G+ L+V G A GGD+D++ L S+ + +R GG L F T+V +W AP D RSYI +SE++ ++ QTC+G AK GE RMD+ +S ++YLGY TE+YGL+WKVRG C D N + LFD V VYG++ DS+I+ +G Y+YGH G W N MHDN YGFDPHDDSD+LTI N +N + V++NT +NKYG+RL V +D EV +G ++ N EN+++G + + + ++ T DN F + A F + +T + NTG ADST V+ ++D G P
Sbjct: 6 PKPDCDSSIAVSVRYNAESARLY-----IESANGRTRGGCVTLEQIWE----QQVDGSPL-YAVDPKSGDV---SRSATGTWLLTEEMYVEDGITLQVHGISA-GGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG------RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPE-LFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYL--GADKPEVVD-SGRSQDNVFMENNIIGGVE-SILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTG-LADSTLKVDRGATFDESSDHGFEP 471 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig77.15850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig77.15850.1 >prot_E-siliculosus-1a_M_contig77.15850.1 ID=prot_E-siliculosus-1a_M_contig77.15850.1|Name=mRNA_E-siliculosus-1a_M_contig77.15850.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=915bp MHEAVRQTLAMSKSEVRRRDPARTTAAAGACFSSRRRRRPLLPKVMATCSback to top mRNA from alignment at E-siliculosus-1a_M_contig77:633583..653839+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig77.15850.1 ID=mRNA_E-siliculosus-1a_M_contig77.15850.1|Name=mRNA_E-siliculosus-1a_M_contig77.15850.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=20257bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig77:633583..653839+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig77:633583..653839+ >mRNA_E-siliculosus-1a_M_contig77.15850.1 ID=mRNA_E-siliculosus-1a_M_contig77.15850.1|Name=mRNA_E-siliculosus-1a_M_contig77.15850.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5490bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig77:633583..653839+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |