mRNA_E-siliculosus-1a_M_contig77.15838.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig77.15838.1 vs. uniprot
Match: D7FWV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV3_ECTSI) HSP 1 Score: 1714 bits (4439), Expect = 0.000e+0 Identity = 1129/1229 (91.86%), Postives = 1138/1229 (92.60%), Query Frame = 1
Query: 148 MSAGTATKRSRIGHRLLLKMGLRKVGFCPMFDEAHEKYTWLTHYVEEMQESLSAYALQLARMTEAARGVGEDASHIYLIRERGFKPAVAFKEAQDMGHSGYAGQLQQALVKGVVEPIGEWLRDLESIEGLVTDFNEIRVQHDHYRLKVEDLSQKAKALEARATTRGDSRDAKQAAEKLKRNTKKLNEVTVEFDKKLSSCCNRMTRAWEDREKMMNGIVARIVHFQESFFAEQLMNSLGVARILSAAEGSGPRWGGTMGIEPFVPKGHVRHYEGELLRKHKVMKERMWYRLVGSSLEVYDMKPKEGRDNTPMYVVTELPVTVHEVKGVTKVSGVNFRVTVLGGGETGGGGLNLYAADEVDGKGWMDALTRASEWDQLASSSKAAGIAPGGEAGVAMAXXXXXXXXXXXXXXXXXXXXXXXXXXGKNPELANDKXXXXXXXXXXLLPPGLTGPGGPVGGMGGGVGIGGSFNSRTGRAGLGPSGGGMPFGNMGGHMNPPSFSGSSFSGSTHSHSSMGGLGXXXXXXS-QMGDPRLHMAAQQMGMSSNXXXXXXXXXXXXXXMPPHFDPPQMSGPPVNPSTGLPVGMRQNGPPIVLPAGMVPRGGGPVXXXXXXXXXXXXXXXXGPWGSTPQQXXXXXXXXXXXXXX--LSTSRSFTSRFGMKQGAAGRQQGLRRSSSFGDWLGPSGVGQPLSPTMEVDSFETQSTRSAPPFGATATVGDATAAAEXXXXXXXXXAAGGHVTGTEETKSSTKDKKGDEGADKATGAKAXXXXXXXXXXXXXXXXXXXXXXXKSAEPPAAVLPAPAPGAITIQTIHTEKDPPQAPXXXXXXXXXXXXXXXXXXXXXXXXX--IPLSDLFKRGDDGGLSRYDTNGETPARARSKPASTWKRMMSLGGSGSSYRYDGGDAGVSGEGKSSAEEVSESDSALAAKAKNDGTQDSAALTTAEVSRRTDSGTTAGSSXXXXXXXXXVVADTPSSAASTRATVGDPTPVIPAVEPPSESPAGGCEYITPAYFAAFSAATTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAKVFQRLCDSSGSETETGDAGGGAAAGAFGEESTLSFKQLMGWDEVQELLEYGALKEGELTTLWQEAARAQDAELGTGGDPRAQTTDIWGSGSPGAANAGAAAPGSQEGGSGGSTRDVLTVKGFMILVKLIEELQFEKELEQDKGVGLVPGPVCVV 3819
MSAGTATKRSRIGHRLLLKMGLRKVGFCPMFDEAHEKYTWLTHYVEEMQESLSAYALQLARMTEAARGVGEDASHIYL+RERGFKPAVAFKEAQDMGHSGYAGQLQQALVKGVVEPIGEWLRDLESIEGLVTDFNEIRVQHDHYRLKVEDLSQKA+ALEARATTRGDSRDAKQAAEKLKRNTKKLNEVTVEFDKKLSSCCNRMTRAWEDREKMMNGIVARIVHFQESFFAEQLMNSLGVARILSAAEG GPRWGGTMGIEPFVPKGHVRHYEGELLRKH VMKERMWYRLVGSSLEVYDMKPKEGRDNTPMYVVTELPVTVHEVKGVTKVSGVNFRVTVLGGGETGGGGLNLYAADEVDGKGWMDALTRASEWDQLASSSKAAGIAPGGEAGVAMA XXXXXXXXXXXXXXXXX XXXXXX KNPELAN XXXXXXXXXXLLPPGL GPGGPVGGMGGGVGIGGSFNSRTGRAGLGPSG GMPFGNMG HMNPPSFSGSS XXXXXX QMGDPRLHMAAQQMGMSSN XXXXXXXXXXXXMPPHFDPPQMSGPPVNPSTGLPVGMRQNGPPIVLPAGMVPRGGG XXXXXXXXXXXXXXXXGPWGSTPQQXXXXXXXXXXXXXX L TSRSFTSRFGMKQGAAGRQQG RRSSSFGDWLGPSGVGQPLSPTMEVDSFETQSTRSAPPFGATATVGDATAAAEXXXXXXXXX AGGHVTGTEETKSSTKDKKGDEGADKATGA XXXXXXXXXXXXXXXXXXXXXXX APG +TIQTIHT+KD P+ PXXXXXXXXXXXXXXXXXXXXXXXXX IPLSDLFKRGDDGGLSRYDT+GETPARARSKPASTWKRMMS GG+GSSYRYD GDAGVSGEGKSSAEEVSESDSALAAKAKNDGTQDSAALTTAEVSRRTDSG TAGSS VVADTPSSAASTRATVGDPTPVIPAVEPPSESPAGGCEYITPAYFAAFSAATTPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AQAKVFQRLCDSSGSETETGDAGGGAAAGAFGEESTLSF+QLMGWDEVQELLE+GALKEGELTTLWQEAARAQDAELGTGGDPRAQTTDIWGSGSPGAANA AAAPGSQEGGSGGSTRDVLTVKGFMILVKLIEELQFEKELEQDKGVGLVPGPVCVV
Sbjct: 1 MSAGTATKRSRIGHRLLLKMGLRKVGFCPMFDEAHEKYTWLTHYVEEMQESLSAYALQLARMTEAARGVGEDASHIYLVRERGFKPAVAFKEAQDMGHSGYAGQLQQALVKGVVEPIGEWLRDLESIEGLVTDFNEIRVQHDHYRLKVEDLSQKARALEARATTRGDSRDAKQAAEKLKRNTKKLNEVTVEFDKKLSSCCNRMTRAWEDREKMMNGIVARIVHFQESFFAEQLMNSLGVARILSAAEGGGPRWGGTMGIEPFVPKGHVRHYEGELLRKHMVMKERMWYRLVGSSLEVYDMKPKEGRDNTPMYVVTELPVTVHEVKGVTKVSGVNFRVTVLGGGETGGGGLNLYAADEVDGKGWMDALTRASEWDQLASSSKAAGIAPGGEAGVAMAGAXXXXXXXXXXXXXXXXXKXXXXXXEKNPELANXXXXXXXXXXXXLLPPGLAGPGGPVGGMGGGVGIGGSFNSRTGRAGLGPSGVGMPFGNMGSHMNPPSFSGSSXXXXXXXXXXXXXXXXXXXXXXXQMGDPRLHMAAQQMGMSSNGRXXXXXXXXXXXXMPPHFDPPQMSGPPVNPSTGLPVGMRQNGPPIVLPAGMVPRGGGXXXXXXXXXXXXXXXXXXGPWGSTPQQXXXXXXXXXXXXXXXXLGTSRSFTSRFGMKQGAAGRQQGFRRSSSFGDWLGPSGVGQPLSPTMEVDSFETQSTRSAPPFGATATVGDATAAAEXXXXXXXXXXAGGHVTGTEETKSSTKDKKGDEGADKATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVTIQTIHTKKDAPRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLSDLFKRGDDGGLSRYDTSGETPARARSKPASTWKRMMSFGGAGSSYRYDAGDAGVSGEGKSSAEEVSESDSALAAKAKNDGTQDSAALTTAEVSRRTDSGATAGSSGGS------VVADTPSSAASTRATVGDPTPVIPAVEPPSESPAGGCEYITPAYFAAFSAATTPAPAGGPGSGANPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASNDAVA-AQAKVFQRLCDSSGSETETGDAGGGAAAGAFGEESTLSFRQLMGWDEVQELLEFGALKEGELTTLWQEAARAQDAELGTGGDPRAQTTDIWGSGSPGAANAAAAAPGSQEGGSGGSTRDVLTVKGFMILVKLIEELQFEKELEQDKGVGLVPGPVCVV 1222
BLAST of mRNA_E-siliculosus-1a_M_contig77.15838.1 vs. uniprot
Match: A0A6H5KHT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT2_9PHAE) HSP 1 Score: 1218 bits (3152), Expect = 0.000e+0 Identity = 1015/1952 (52.00%), Postives = 1037/1952 (53.12%), Query Frame = 1
Query: 148 MSAGTATKRSRIGHRLLLKMGLRKVGFCPMFDEAHEKYTWLTHYVEEMQESLSAYALQLARMTEAARGVGEDASHIYLIRERGFKPAVAFKEAQDMGHSGYAGQLQQALVKGVVEPIGEWLRDLESIEGLVTDFNEIRVQHDHYRLKVEDLSQKAKALEARATTRGDSRDAKQAAEKLKRNTKKLNEVTVEFDKKLSSCCNRMTRAWEDREKMMNGIVARIVHFQESFFAEQLMNSLGVARILSAAEGSGPRWGGTMGIEPFVPKGHVRHYEGELLRKHKVMKERMWYRLVGSSLEVYDMKPKEGRDNTPMYVVTELPVTVHEVKGVTKVSGVNFRVTVLGGGETGGGGLNLYAADEVDGKGWMDALTRASEWDQLASSSKAAGIAPGGEAGVAMAXXXXXXXXXXXXXXXXXXXXXXXXXXGKNPELANDKXXXXXXXXXXLLPPGLTGPGGPVGGM-------------------------GGGVGIGGSFNSRTGRAGLGPSGGGMPFGNMGGHMNPPSFSGSS---------------------------------------FSGSTHSHSSMGGLGXXXXXX---SQMGDPRLHMAAQQMGMSSNXXXXXXXXXXXXXXMPPHFDPPQMSGPPVNPSTGLPVGMRQNGPPIVLPAGMVPRGGGPVXXXXXXXXXXXXXXXXG-----PWGSTPQQXXXXXXXXXXXXXX-LSTSRSFTSRFGMKQGAAGRQQGLRRSSSFGDWLGPSGVGQPLSPTMEVDSFETQSTRSAPPFGATATVGDATAAAEXXXXXXXXXAAGGHVTGTEETKSSTKDKKGDEGADKATGAKAXXXXXXXXXXXXXXXXXXXXXXXKSAEPPAAVLPAPAPGAITIQTIHTEKDPPQAPXXXXXXXXXXXXXXXXXXXXXXXXX--------IPLSDLFKRGDDGGLSRYDTNGETPARARSKPASTWKRMMSLGGSGSSYRYDGGDAGVSGEGKSSAEEVSESD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SALAAKAKNDGTQDSAALTTAEVSRRTDSGTTAGSSXXXXXXXXXVVADTPSSAASTRATVGDPTPV-----IPAVEPPSESPAGGCEYITPAYFAAFSAATTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------------------AQAKVFQRLCDSSGSETETGDAGGGAAAGAFGEESTLSFKQLMGWDEVQELLEYGALKEGELTTLWQEAARAQDAELGTGGDPRAQTTDIWGSGSPGAANAGAAAPGSQEGGSGGSTRDVLTVKGFMILVKLIEELQFEKELEQDKGVGLVPGPVCVV 3819
MSAGTATKRSRIGHRLLLKMGLRKVGFCPMFDEAHEKYTWLTHYVEEMQESLSAYALQLARMTEAARGVGEDASHIYLIRERGFKPAVAFK+AQDMGHSGYAGQLQQALVKGVVEPIGEWLRDLESIEGLVTDFNEIRVQHDHYRLKVEDLSQKA+ALEARATTRGDSRDAKQAAEKLKRNTKKLNEVTVEFDKKLSSCCNRMTRAW+DREKMMNGIVARIVHFQESFFAEQLMNSLGVARILSAAEGSGPRWGGTMGIEPFVPKGHVRHYEGELLRKH VMKERMWYRLVGSSLE YDMKPKEGRDNTPMYVVTELPV V+EVKGVTK+SGVNFRVTVLGGGETGGGGLNLYAADEVDGKGWMDALTRASEWDQLASS+K EA V + G LAN T G GG GG G+ + GG N GG +G+ S GGLGXXXXXX SQMGDPRLHMAAQQMGMS+N XXXXXXXXX MPPHFDPPQ GPPVNPSTGLP+GM QNGPPIVLPAGMVPRGGGPVXXXXXXXXXXXXXXXX PWGSTPQ XXXXXXXXXXXXXX LSTSRSFTSRFGMKQGAAGRQQG RR+SSFGDW+GPSGVGQPLSPTME+DSFETQSTRSAPPFGATA VGDATAAAE GGHVTGTEETKSSTKDKKGDEGADKATGA XXXXXXXXXXXXXXXXXXXXXXX GAITIQTIHT+KD P A XXXXXXXXXXXX XXXXXXXX IPLSDLFKRGDDGGLSRYDT+GETPAR R KPASTWKRMMSLGG GSSYRYDGGDAGVSGEGKSSAEEVSESD SA AAKAKNDGTQDSAALTTAEVSRRTD+GTTAGSS VVADTPSSAASTRA VGDPTPV AVEPPSESPAGGCEYITPAYFAAFSAATTP XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX AQAKVFQRLCDSSGSETETGDAGGGAA G+FGEESTLSF QLMGWDEVQELLEYGALKE ELT LWQ+AARAQDAELGTGGDPRA+ TDIWGSGSPGAANAGAAAPGSQEGGS GSTRDVLTVKGFMILVKLIEELQFEKELEQDKGVGL PGPVCVV
Sbjct: 1 MSAGTATKRSRIGHRLLLKMGLRKVGFCPMFDEAHEKYTWLTHYVEEMQESLSAYALQLARMTEAARGVGEDASHIYLIRERGFKPAVAFKQAQDMGHSGYAGQLQQALVKGVVEPIGEWLRDLESIEGLVTDFNEIRVQHDHYRLKVEDLSQKARALEARATTRGDSRDAKQAAEKLKRNTKKLNEVTVEFDKKLSSCCNRMTRAWDDREKMMNGIVARIVHFQESFFAEQLMNSLGVARILSAAEGSGPRWGGTMGIEPFVPKGHVRHYEGELLRKHMVMKERMWYRLVGSSLEAYDMKPKEGRDNTPMYVVTELPVAVYEVKGVTKISGVNFRVTVLGGGETGGGGLNLYAADEVDGKGWMDALTRASEWDQLASSNKV-------EAQVRESRAFLNRCKTAHANNTTTDGLERDL--GVTEALANPPPLPADRPDAKTYKSTTTDANGGGGGSAAGXSXXXXXXXXXXXXXXXXXXXPGGEAGVAAAXXXXXXXXXXAKGKGGK---NGGGEKKTEHANGTKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMSGGLGXXXXXXXXXSQMGDPRLHMAAQQMGMSNNGRSGXXXXXXXXXPMPPHFDPPQ--GPPVNPSTGLPIGMTQNGPPIVLPAGMVPRGGGPVXXXXXXXXXXXXXXXXXXXXXXPWGSTPQXXXXXXXXXXXXXXXXLSTSRSFTSRFGMKQGAAGRQQGFRRASSFGDWMGPSGVGQPLSPTMEMDSFETQSTRSAPPFGATAAVGDATAAAE-----------GGHVTGTEETKSSTKDKKGDEGADKATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GAITIQTIHTKKDAPPAAAXXXXXXXXXXXXAESKXXXXXXXXXXXXXXXAIPLSDLFKRGDDGGLSRYDTSGETPARTRGKPASTWKRMMSLGGGGSSYRYDGGDAGVSGEGKSSAEEVSESDRPKASASSLKKSSWSLKRSKSSVSNASPPRASISSSSXXTRQPRTPSMAERKSERRAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSPMEDVDMDDDFKRAPPLSRDETSLGRTTRIKTTKKPSRGSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNRENIRKAGAKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXLGSGGDATEARVEAPSATVLAASDTTDRSTASAXXXXXXXXXXXXXXXXXXXXXKMSRVPSIIGPVAAGLGIKFGRSSGGGPPGVPATPAPPAAAGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTVSRATTAAPASAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQASSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAAKRVDGSTGIMKNPTLEEIMMRSSEAGDGGKSSGGGSTNYMAVPAVVRTVAGTSAPAAKAKNDGTQDSAALTTAEVSRRTDAGTTAGSSGGS------VVADTPSSAASTRAMVGDPTPVDXXXXXXAVEPPSESPAGGCEYITPAYFAAFSAATTPTXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGVGXXXXXXDRAVVVGAPPTTAITASGAVMPVPSPDTPGSTGSGPQVAAQAKVFQRLCDSSGSETETGDAGGGAAVGSFGEESTLSFNQLMGWDEVQELLEYGALKEEELTALWQDAARAQDAELGTGGDPRARATDIWGSGSPGAANAGAAAPGSQEGGSSGSTRDVLTVKGFMILVKLIEELQFEKELEQDKGVGLAPGPVCVV 1915 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig77.15838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig77.15838.1 >prot_E-siliculosus-1a_M_contig77.15838.1 ID=prot_E-siliculosus-1a_M_contig77.15838.1|Name=mRNA_E-siliculosus-1a_M_contig77.15838.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1225bp MSAGTATKRSRIGHRLLLKMGLRKVGFCPMFDEAHEKYTWLTHYVEEMQEback to top mRNA from alignment at E-siliculosus-1a_M_contig77:472053..487259- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig77.15838.1 ID=mRNA_E-siliculosus-1a_M_contig77.15838.1|Name=mRNA_E-siliculosus-1a_M_contig77.15838.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=15207bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig77:472053..487259- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig77:472053..487259- >mRNA_E-siliculosus-1a_M_contig77.15838.1 ID=mRNA_E-siliculosus-1a_M_contig77.15838.1|Name=mRNA_E-siliculosus-1a_M_contig77.15838.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=7350bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig77:472053..487259- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |