mRNA_E-siliculosus-1a_M_contig76.15723.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig76.15723.1
Unique NamemRNA_E-siliculosus-1a_M_contig76.15723.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: D8LBH8_ECTSI (Ribulose-phosphate 3-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH8_ECTSI)

HSP 1 Score: 543 bits (1398), Expect = 1.140e-187
Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 1
Query:    1 MARAGAFVAIACVGASQAFVVPTATVSGASTRHTSSSLTMAAENAYHKKDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATIA 828
            MARAGAFVA ACVGASQAFVVPTATVSGASTRHTSSSLTMAAENAYHKKDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATIA
Sbjct:    1 MARAGAFVAFACVGASQAFVVPTATVSGASTRHTSSSLTMAAENAYHKKDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATIA 276          
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: A0A835YRZ4_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ4_9STRA)

HSP 1 Score: 401 bits (1031), Expect = 2.470e-132
Identity = 212/275 (77.09%), Postives = 234/275 (85.09%), Query Frame = 1
Query:    1 MARAGAFVAIACVGASQAFVVPTATVSGASTRHTSSSLTMAAENAYHKKDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATI 825
            M ++ A   +A VG + AF       + A +R TSS L MA  NA+H+KDF IAPSILSADMAKLG+EVDNAM+AGAD+VHFDVMDNHYVPNLTIGPLVCK LR+HGV N IDVHLMVSPVDRIVGDFAEAGAS+ITFHPEASPHVDRTL LIKS GCK+GLVFNPATPLD AKYVLDKVDIILLMSVNPGFGGQ+FIP+TLDKLREAR MIDESG+DIRLE+DGG    NIKEIAEAGADMFVAGSA+F NPRT E Y +TI K+R+ELA A I
Sbjct:    1 MVKSTAVAVLATVGVACAFAP-----ASAPSRPTSS-LRMA-NNAWHRKDFQIAPSILSADMAKLGEEVDNAMAAGADVVHFDVMDNHYVPNLTIGPLVCKALRNHGVKNDIDVHLMVSPVDRIVGDFAEAGASYITFHPEASPHVDRTLQLIKSTGCKSGLVFNPATPLDFAKYVLDKVDIILLMSVNPGFGGQAFIPATLDKLREARAMIDESGFDIRLEIDGGVTQNNIKEIAEAGADMFVAGSAVFKNPRTVEAYTDTITKLRAELAAAQI 268          
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: W7TD18_9STRA (Ribulose-phosphate 3-epimerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD18_9STRA)

HSP 1 Score: 388 bits (997), Expect = 2.270e-127
Identity = 199/262 (75.95%), Postives = 218/262 (83.21%), Query Frame = 1
Query:   28 IACVGASQAFVVPTATVSGASTRHTSSSLTMAAENAYHKKDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELA 813
            +AC G +    V    V      +T   + MAA     KKDFWIAPSILSAD AKLGQEVDN ++AGADIVHFDVMDNHYVPNLTIGP+VCK LRDHGVT PIDVHLMVSPVDRI+ DFA+AGASFITFHPEA+ H+DRTL LIKS GCK+GLVFNPATPL  A++VLDKVDIILLMSVNPGFGGQSFIP TL KL+EARKMIDESGYDIRLEVDGG GVANIK+IAEAGAD FVAGSAI  NPRT++ YK TID MR+ELA
Sbjct:    7 LACAGVAALATVAHGFVPPVPRSYTRGRMAMAA-----KKDFWIAPSILSADFAKLGQEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFADAGASFITFHPEATNHIDRTLQLIKSKGCKSGLVFNPATPLSLAQHVLDKVDIILLMSVNPGFGGQSFIPETLKKLKEARKMIDESGYDIRLEVDGGVGVANIKDIAEAGADFFVAGSAILKNPRTQDAYKATIDAMRAELA 263          
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: F0YLQ5_AURAN (Ribulose-phosphate 3-epimerase n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLQ5_AURAN)

HSP 1 Score: 380 bits (976), Expect = 4.530e-124
Identity = 186/227 (81.94%), Postives = 203/227 (89.43%), Query Frame = 1
Query:  145 KDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATI 825
            KDF IAPSILSAD A+LG+EV N++SAGAD+VHFDVMDNHYVPNLTIGP+VC  LR HGVT PIDVHLMVSPVDRIVGDFA+AGAS+ITFHPEASPHVDRTL LI+  GCKAGLVFNPATPLD  KYV+DKVDIILLMSVNPGFGGQSFIP+TLDK REARK+ID SGYDIRLE+DGG   ANIKE+AEAG DMFVAGSAIF +PRTEE+YK TID MR ELA A +
Sbjct:   43 KDFLIAPSILSADFARLGEEVVNSLSAGADVVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPIDVHLMVSPVDRIVGDFADAGASYITFHPEASPHVDRTLQLIRGAGCKAGLVFNPATPLDILKYVMDKVDIILLMSVNPGFGGQSFIPATLDKAREARKLIDASGYDIRLEIDGGVSGANIKEVAEAGVDMFVAGSAIFRDPRTEEDYKVTIDAMRDELAAAKV 269          
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: A0A6S8QFJ5_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8QFJ5_9STRA)

HSP 1 Score: 379 bits (974), Expect = 8.720e-124
Identity = 186/228 (81.58%), Postives = 204/228 (89.47%), Query Frame = 1
Query:  142 KKDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATI 825
            +KDF IAPSILSAD AKLG EVD +++AGAD+VHFDVMDNHYVPNLTIGP+VC  LR HGVT PIDVHLMVSPVDRIV DFA+AGAS+ITFHPEASPHVDRTL LI+S GCK+GLVFNPATPLD  KYV+DKVDIILLMSVNPGFGGQ+FIP+TLDK REARKMIDESGYDIRLE+DGG   ANIKE+AEAG DMFVAGSAIF +PRTEE YK+TID MR ELA A +
Sbjct:   41 EKDFLIAPSILSADFAKLGAEVDASLAAGADVVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPIDVHLMVSPVDRIVQDFADAGASYITFHPEASPHVDRTLQLIRSTGCKSGLVFNPATPLDILKYVMDKVDIILLMSVNPGFGGQAFIPATLDKAREARKMIDESGYDIRLEIDGGVSGANIKEVAEAGVDMFVAGSAIFRDPRTEEAYKKTIDAMRDELAAAKV 268          
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: L1JR28_GUITC (Ribulose-phosphate 3-epimerase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JR28_GUITC)

HSP 1 Score: 364 bits (934), Expect = 9.090e-118
Identity = 172/228 (75.44%), Postives = 197/228 (86.40%), Query Frame = 1
Query:  145 KDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATIA 828
            KD+ IAPSILSAD AKLGQEVDN ++AGAD+VHFDVMDNHYVPNLTIGP+VCK LR+HGVT PIDVHLMV PVDRI+GDF +AGAS+ITFHPEAS H+DRTL +I+  GCKAGLV NPAT LD+ KYV+DK+DIILLMSVNPGFGGQ FIPS L+K +EARK+ID SGYDIRLE+DGG  V NIK++AE G DMFVAGSAI   PRT++ YK TIDKMR +LA A +A
Sbjct:   49 KDYLIAPSILSADFAKLGQEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRNHGVTAPIDVHLMVQPVDRIIGDFIDAGASYITFHPEASNHIDRTLAMIRDGGCKAGLVLNPATSLDYCKYVMDKIDIILLMSVNPGFGGQKFIPSVLEKAKEARKLIDASGYDIRLEIDGGVTVDNIKQVAECGVDMFVAGSAILKEPRTQDAYKTTIDKMRQQLASAKVA 276          
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: A0A7S2UWQ6_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ6_9STRA)

HSP 1 Score: 363 bits (933), Expect = 1.330e-117
Identity = 181/244 (74.18%), Postives = 208/244 (85.25%), Query Frame = 1
Query:   82 GASTRHTSSSLTMAAENAYHKKDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELA 813
            G  TR + SSL M A+  +  KD+ IAPSILSA+ AKLG+EVDN ++AGAD+VHFDVMDNHYVPNLTIGP+VCK L+DHGVT PIDVHLMV PVDRI+GDFA+AGA +ITFHPEAS H+DR+LGLIKS GCK+GLVFNPAT LD+AKYVLDKVDIILLMSVNPGFGGQSFIP   DK+++ARKMIDESGYDI+LE+DGG  V NIK+IAEAG DMFVAGSAI   PR ++ Y ETI  MR +LA
Sbjct:   28 GLGTRVSKSSLKMGAD--FPDKDYLIAPSILSANFAKLGEEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALKDHGVTAPIDVHLMVDPVDRIIGDFADAGADYITFHPEASGHIDRSLGLIKSLGCKSGLVFNPATSLDYAKYVLDKVDIILLMSVNPGFGGQSFIP-IYDKIKQARKMIDESGYDIKLEIDGGVNVNNIKDIAEAGVDMFVAGSAILKEPRNKDAYAETIKTMREQLA 268          
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: A0A7S0LBR0_9EUKA (Ribulose-phosphate 3-epimerase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LBR0_9EUKA)

HSP 1 Score: 358 bits (919), Expect = 9.090e-116
Identity = 173/226 (76.55%), Postives = 199/226 (88.05%), Query Frame = 1
Query:  148 DFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATI 825
            ++ IAPSILSAD AKLG+EVD  ++AGAD VHFDVMDNHYVPNLTIGPLVCK LR+HG+T PIDVHLMVSPVDRI+GDFA+AGAS+ITFHPEA+ H+DR+L L+++ GCK+GLVFNPAT LD  KYV+DKVDI+LLMSVNPGFGGQSFIP+TLDKLREAR MIDESG+DI LE+DGG G ANI E+A AGADMFVAGSAIFN P    +YKETIDKMR+ELA   +
Sbjct:   32 EYLIAPSILSADFAKLGEEVDTVLAAGADTVHFDVMDNHYVPNLTIGPLVCKALRNHGITAPIDVHLMVSPVDRIIGDFADAGASYITFHPEATTHIDRSLQLVRAAGCKSGLVFNPATSLDCLKYVMDKVDIVLLMSVNPGFGGQSFIPATLDKLREARAMIDESGFDISLEIDGGVGPANIAEVAAAGADMFVAGSAIFNTP----DYKETIDKMRAELATVPV 253          
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: A0A7S0M6B2_9CRYP (Ribulose-phosphate 3-epimerase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M6B2_9CRYP)

HSP 1 Score: 356 bits (914), Expect = 4.420e-115
Identity = 171/228 (75.00%), Postives = 199/228 (87.28%), Query Frame = 1
Query:  145 KDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATIA 828
            KDF IAPSILSA+ AKLG+EVDN ++AGAD+VHFDVMDNHYVPNLTIGP VCK LRDHGVT PIDVHLMVSPVDRI+GDF +AGAS+ITFHPEA+ HVDR+L L+++ GCK+GLVFNP+T LD+ KYV+DKVDIILLMSVNPGFGGQ FIP+ LDK REARKMIDESG+DIRLE+DGG  V NIK++AEAG D FVAGSAI   PRT++ Y+ TI++MR+ LA A  A
Sbjct:   25 KDFLIAPSILSANFAKLGEEVDNMLAAGADVVHFDVMDNHYVPNLTIGPGVCKALRDHGVTAPIDVHLMVSPVDRIIGDFVDAGASYITFHPEATNHVDRSLSLVRAAGCKSGLVFNPSTSLDYLKYVMDKVDIILLMSVNPGFGGQKFIPNVLDKAREARKMIDESGFDIRLEIDGGVTVDNIKDVAEAGVDFFVAGSAILKAPRTKDAYRSTINQMRTNLAAAKRA 252          
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Match: A0A7S2E7A3_9STRA (Ribulose-phosphate 3-epimerase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E7A3_9STRA)

HSP 1 Score: 356 bits (913), Expect = 7.690e-115
Identity = 174/227 (76.65%), Postives = 195/227 (85.90%), Query Frame = 1
Query:  145 KDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMRSELADATI 825
            KD+ IAPSILSAD AKLG+EVDN + AGAD+VHFDVMDNHYVPNLTIGP+VCK LRDHGVT PIDVHLMVSPVD  +GDF +AGAS+ITFHPEA+ HVDR+L LIK+ GCKAGLVFNPAT LD A+YV+DK+DIILLMSVNPGFGGQ+FIP+TLDK R ARKMIDE+G D RLE+DGG  V NIKE+ EAG DMFVAGSAI   PRT E YK TID+MR ELA A +
Sbjct:   37 KDYLIAPSILSADFAKLGEEVDNVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDAAIGDFIDAGASYITFHPEATNHVDRSLQLIKAGGCKAGLVFNPATSLDIAEYVMDKLDIILLMSVNPGFGGQAFIPATLDKARLARKMIDEAGVDCRLEIDGGVKVDNIKEVCEAGVDMFVAGSAILKEPRTVEAYKATIDEMRKELAAAEM 263          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig76.15723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBH8_ECTSI1.140e-18799.64Ribulose-phosphate 3-epimerase n=2 Tax=Ectocarpus ... [more]
A0A835YRZ4_9STRA2.470e-13277.09Ribulose-phosphate 3-epimerase n=1 Tax=Tribonema m... [more]
W7TD18_9STRA2.270e-12775.95Ribulose-phosphate 3-epimerase n=2 Tax=Monodopsida... [more]
F0YLQ5_AURAN4.530e-12481.94Ribulose-phosphate 3-epimerase n=2 Tax=Aureococcus... [more]
A0A6S8QFJ5_9STRA8.720e-12481.58Ribulose-phosphate 3-epimerase n=1 Tax=Pelagomonas... [more]
L1JR28_GUITC9.090e-11875.44Ribulose-phosphate 3-epimerase n=1 Tax=Guillardia ... [more]
A0A7S2UWQ6_9STRA1.330e-11774.18Ribulose-phosphate 3-epimerase n=1 Tax=Fibrocapsa ... [more]
A0A7S0LBR0_9EUKA9.090e-11676.55Ribulose-phosphate 3-epimerase n=1 Tax=Coccolithus... [more]
A0A7S0M6B2_9CRYP4.420e-11575.00Ribulose-phosphate 3-epimerase n=1 Tax=Cryptomonas... [more]
A0A7S2E7A3_9STRA7.690e-11576.65Ribulose-phosphate 3-epimerase n=2 Tax=Ditylum bri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig76contigE-siliculosus-1a_M_contig76:179717..183678 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size831
Model size2202
Exons3
Ec32 orthologEc-27_003930.1
Ec32 ortholog descriptionribulose-phosphate 3-epimerase
Hectar predicted targeting categorychloroplast
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EC5.1.3.1
EggNOG OGsCOG0036@1,KOG3111@2759
EggNOG free text desc.ribulose-phosphate 3-epimerase activity
KEGG ModuleM00004,M00007
KEGG Pathwayko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ReactionR01529
KEGG koko:K01783
KEGG rclassRC00540
Seed eggNOG ortholog44056.XP_009041362.1
Seed ortholog evalue2.2e-103
Seed ortholog score382.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig76.15723.1prot_E-siliculosus-1a_M_contig76.15723.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig76 179717..182307 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936071.230073-CDS-E-siliculosus-1a_M_contig76:179716..1801971622936071.230073-CDS-E-siliculosus-1a_M_contig76:179716..180197Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig76 179717..180197 +
1696250917.6424665-CDS-E-siliculosus-1a_M_contig76:179716..1801971696250917.6424665-CDS-E-siliculosus-1a_M_contig76:179716..180197Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig76 179717..180197 +
1622936071.247409-CDS-E-siliculosus-1a_M_contig76:181214..1813991622936071.247409-CDS-E-siliculosus-1a_M_contig76:181214..181399Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig76 181215..181399 +
1696250917.6592295-CDS-E-siliculosus-1a_M_contig76:181214..1813991696250917.6592295-CDS-E-siliculosus-1a_M_contig76:181214..181399Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig76 181215..181399 +
1622936071.267686-CDS-E-siliculosus-1a_M_contig76:182142..1823071622936071.267686-CDS-E-siliculosus-1a_M_contig76:182142..182307Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig76 182143..182307 +
1696250917.6698885-CDS-E-siliculosus-1a_M_contig76:182142..1823071696250917.6698885-CDS-E-siliculosus-1a_M_contig76:182142..182307Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig76 182143..182307 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936071.2867148-UTR-E-siliculosus-1a_M_contig76:182307..1836781622936071.2867148-UTR-E-siliculosus-1a_M_contig76:182307..183678Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig76 182308..183678 +
1696250917.6827726-UTR-E-siliculosus-1a_M_contig76:182307..1836781696250917.6827726-UTR-E-siliculosus-1a_M_contig76:182307..183678Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig76 182308..183678 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig76.15723.1

>prot_E-siliculosus-1a_M_contig76.15723.1 ID=prot_E-siliculosus-1a_M_contig76.15723.1|Name=mRNA_E-siliculosus-1a_M_contig76.15723.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=277bp
MARAGAFVAIACVGASQAFVVPTATVSGASTRHTSSSLTMAAENAYHKKD
FWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVC
KGLRDHGVTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTL
GLIKSYGCKAGLVFNPATPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPS
TLDKLREARKMIDESGYDIRLEVDGGCGVANIKEIAEAGADMFVAGSAIF
NNPRTEENYKETIDKMRSELADATIA*
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mRNA from alignment at E-siliculosus-1a_M_contig76:179717..183678+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig76.15723.1 ID=mRNA_E-siliculosus-1a_M_contig76.15723.1|Name=mRNA_E-siliculosus-1a_M_contig76.15723.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3962bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig76:179717..183678+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCTAGGGCAGGAGCGTTCGTTGCAATCGCGTGCGTAGGCGCAAGCCA AGCGTTCGTGGTCCCGACGGCAACCGTCTCGGGCGCATCAACCCGACACA CGTCGTCGTCATTGACGATGGCAGCAGAGAACGCGTACCACAAGAAGGAC TTCTGGATCGCCCCGTCGATCCTCTCGGCGGACATGGCAAAGCTGGGCCA GGAGGTGGACAACGCGATGTCGGCGGGCGCGGACATCGTTCACTTCGATG TGATGGACAACCACTACGTGCCTAACCTTACGATCGGGCCCCTCGTGTGC AAGGGGCTGAGGGACCACGGCGTCACCAACCCCATCGACGTGCACCTCAT GGTGTCGCCCGTCGACCGCATCGTCGGCGACTTCGCTGAGGCCGGCGCGT CGTTCATCACGTTCCACCCCGAGGCGTCGCCCCACGTGGACCGTACCCTG GGGCTCATCAAGTCATACGGCTGCAAGGCTGGTGCGTTTCGTGCGTGTGT GACGTTCCTCCTGATTTTTAGAAATTACGTTCACTGAAAGACTAATCGTT CATCAGCAGCTGAGGTCATCTCGGCACACCTGGTCCGATTGCGTGGAGGT GTGTACTGTATGGTTCGGAAGACCTGTATATGCTGTCTTCGATTGCAAAC AAGATGCTGATGTTGGTCGCTCCCGTGACTTGTTTCATGTGTTTGTCATG TGCTCGAGTGTTGCACATGAGTGGAATTGCACCAAAATCACGTTTGAGAT GCACAGCATGCGAACCTGCGGGATGTCGCATCATACAACCGCTACTTTCG TGGTGGGGCTTATGTGCGGGCCCAGCAGCGCAACAAGGAGAGCAATGCTT GCCCCGCCCAACCGCAGGTCGTGTTAACTGCTGTGCCCAGCATCATCCAA TATACTGCTTGTAGCACGCAGAATTCGATAAAAAAGAGGTTTCGTGTGAA AAAGCTGTGAACGGCGAACTTGTATTCTTGGGACCATTCGCCATGGGGAA CAAGCAACGACTGCTGACCAATTACATTCCATGCGATGGTAGATTCGTTC TCACGTGTCTACCAGTCGTGGCAATTTTTCCAAATTTCCAAATGCGAGGT CAATGGTCTCATGACTAACGACTACGGCATGCACGACTATGAGTACCCCC CCCACCCCCACCCCCGTCCTTTAAACCCCATGGGCAAATACTCGTACTTC CGAATCCAAGATTCCAAAAATTGAGTGTGCAGCACTCTCTCTGTGTTCGC ACAGGTACATAGAGGTGCAAGAGCTAGTAGTTCTCCGCCCCCCACGATGC CGATGGCGTCTGAAAGTGCACGTCAGTCAAGATGAAAAGATCTTGTCTTG AGCCGGTACCGCAACGCTATCATAGTGGTAAGCTGCCTCAATAAAAACGA TCGCCAGCTGAAACCCCAGCTTAAAGGAGTCACGCAGGTTGGACTGCATT GACCCCCCCTCCCCGCCCCTCGCTCGTTTCCTTGTACGCTCGCCGTAGGA CTTGTGTTCAACCCTGCGACTCCTCTTGACCACGCCAAGTACGTACTGGA CAAGGTCGACATCATCCTACTCATGTCTGTCAACCCTGGCTTCGGCGGGC AGAGCTTCATCCCCAGCACCCTCGACAAGCTGAGGGAGGCACGCAAGATG ATCGACGAGTCCGGCTACGACATCCGCCTTGAGGTGCGTTTACCGCTGAG CACAAACAAAATGGTGGCAACACTGCGTGGGGTGTGCAGCATGTGGTGGG CTCGCGGTAAGGCAACCGCCGTTGCGTTGTCGCAGCAGCACTTTTATGTT CATGATTTCCTGTACCCGGCAAAGAGCAGATTGTGGAAGACGAATCCATG GGCCAACTCTGCATGGTAGGCGTCGGCACAGCAGTTAGTGTACGGCAAAT ATCGGCCCAGCTTCGGGCGAAGATACCTTGGAGGCTGATTGGGTGTAGGA TTCGTTGCACCCCAGTGGTGCATGCGGTTTAAACGTTTGCGGCGTGTGTT TCGAGATGAATCGACACTTTGCATGGACGGTGCTGCGTGCAGTTGGCGTG CCGGTTTCGTGTTGGCCCACCGCCTTGGGGGCGAAGGACGGGGGGGTTAG GTTGTCGTTTTTCTGTTTGAAGTTGATACCTTGACCTCCTCCCGTTATAG AGTGGGAGCATCGTTCACATCTTTGTGGCCACCAACACGCGAGGAGGGGG AGGAGGTACCGATTGTTTTGTTTTCGCCTACCGAACAGGCATGACGTGAA TCGCGAAGCACCATGAGGTGTTCGTGAGCTCTGTGACAGCATCGTGCTGC TGTCGGGCATGGGTTTTACTCGCAATGCTTCGACAGCAGACCGTGGCTGT GGCCGGGGTTGTCATTTGACTTTTGGATTTGCCTGACACGTGCTTCGTCG CGCCTCGTGTGCACATATCGTTACAGGTGGACGGTGGTTGCGGTGTAGCC AACATCAAGGAGATCGCGGAGGCGGGCGCGGACATGTTCGTCGCGGGGTC GGCTATCTTCAACAACCCCAGGACGGAGGAAAACTACAAGGAGACTATCG ACAAGATGCGCTCCGAGCTCGCCGACGCGACCATCGCGTAGAGGGCAACA TTTGACCGTGACTGAACGACGGCGTGAGTGCAATACATGTACAACGTGGG TCGATGACAAAGAATGCTTTTAAGTCAGTTGGTCAGAGGAAGCGGAGCAG GTAGTAGAAGTAAAGTCGAGAGATCCTACTAGGCATTGGAAACGTTTCTT GGGGTATGCATGGGCATACGCCAGCCGCAAGCTTTTCAACAACGGTGAAA CTTTTAACTTCCAGATACTACAATCGTCCTAACATTTGCATACCTTGCCA TTGCTTTCATGATATCCGTTCAAAGACAAGGGCTTCGCTGACCTACTGCC CCTGTTCGGTCTTGCTTTCACGCTCCACCAGTCTGCTCCCAAAAAAATTC GGGAGGAAGATGGCGGCGCGACATGCACAGCAGAAAAACATCCGGGGGTC AACTCCTTGGTAGAGAGAGCACCGCCGTAGATTGCGCAATATTGATTTGT ATCGATAGAGTTGTTGGGTATCGGCGAAGAATTTTTGTTTATTCGTTGGG AGGGGGTCGGGATCCAAAGGCCAGGGTATCCGTTTTGATAAGAGCGGGCC TGTCTCTGTCTCGCACGAGTTTTTAGAGGATATACATACCGTTACAGGCA GACTGCCTGCTCGAGACAATCCGTAAGGGGATACGTTTGAGGTCTGGGGG GATTTGTTGTCACACTCTTGGAGACGGAATTGCGACGAGTTTTCAAAATG TATACATACCATCACAAACGGGCGAGACAGTCCGCAAGGGGTTGTTGTTG AAGTATCTGGATTTTTTGTTTGCCCTATTACTCCAGTGATGCCAGCCGGA AACTAGGAGAGTTTTTAGTGAAAATAGACGTCGCATCACAGAAGGGCGCG ACGGAACCAGTAACGGGGAAGTCTCGGGACTTTCTTTGCACCCTCAAGAC TCGGCGATGCCAGCCGGAATAAAGCACGGAGTATAAGCAACCCTTGGAGG AGAGATGGTTTGCGAAAGTATGCCTGGTCAACCGCACAACTTCCCGGAGA AGTGTGGTACAACGTTAACGTTTCTATCCTCTGGCGCGGTCTTCGTCTAC GGTATTTAGTTTCTATTACAACATGCGTATGCGTGCGTGCCAGTTTCTCA TCGCGTCCTCTCTTTTTGCTAATAATACTTTAACGTAGTTGTTGAAAGGT TTTCGTTGGGGACCGGCCGCCACATACGCGTCTGGTGGTCGCCCCTAGTG TCCCACACTCGTCGTGGATATGGTTGCGTAGATGACAGAACGCAGTGTGG ATCGTGCAACCTGCCCCATGAGAAAGCAAACGATCTTCCTGCAGGGATTC GGACTTGTGGCACACCGATGAGCCTGACAATCCTTCACACAATCGAAAAC GCGCTCGCTCAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig76:179717..183678+

>mRNA_E-siliculosus-1a_M_contig76.15723.1 ID=mRNA_E-siliculosus-1a_M_contig76.15723.1|Name=mRNA_E-siliculosus-1a_M_contig76.15723.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1662bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig76:179717..183678+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCTAGGGCAGGAGCGTTCGTTGCAATCGCGTGCGTAGGCGCAAGCCA
AGCGTTCGTGGTCCCGACGGCAACCGTCTCGGGCGCATCAACCCGACACA
CGTCGTCGTCATTGACGATGGCAGCAGAGAACGCGTACCACAAGAAGGAC
TTCTGGATCGCCCCGTCGATCCTCTCGGCGGACATGGCAAAGCTGGGCCA
GGAGGTGGACAACGCGATGTCGGCGGGCGCGGACATCGTTCACTTCGATG
TGATGGACAACCACTACGTGCCTAACCTTACGATCGGGCCCCTCGTGTGC
AAGGGGCTGAGGGACCACGGCGTCACCAACCCCATCGACGTGCACCTCAT
GGTGTCGCCCGTCGACCGCATCGTCGGCGACTTCGCTGAGGCCGGCGCGT
CGTTCATCACGTTCCACCCCGAGGCGTCGCCCCACGTGGACCGTACCCTG
GGGCTCATCAAGTCATACGGCTGCAAGGCTGATGGCTAGGGCAGGAGCGT
TCGTTGCAATCGCGTGCGTAGGCGCAAGCCAAGCGTTCGTGGTCCCGACG
GCAACCGTCTCGGGCGCATCAACCCGACACACGTCGTCGTCATTGACGAT
GGCAGCAGAGAACGCGTACCACAAGAAGGACTTCTGGATCGCCCCGTCGA
TCCTCTCGGCGGACATGGCAAAGCTGGGCCAGGAGGTGGACAACGCGATG
TCGGCGGGCGCGGACATCGTTCACTTCGATGTGATGGACAACCACTACGT
GCCTAACCTTACGATCGGGCCCCTCGTGTGCAAGGGGCTGAGGGACCACG
GCGTCACCAACCCCATCGACGTGCACCTCATGGTGTCGCCCGTCGACCGC
ATCGTCGGCGACTTCGCTGAGGCCGGCGCGTCGTTCATCACGTTCCACCC
CGAGGCGTCGCCCCACGTGGACCGTACCCTGGGGCTCATCAAGTCATACG
GCTGCAAGGCTGGACTTGTGTTCAACCCTGCGACTCCTCTTGACCACGCC
AAGTACGTACTGGACAAGGTCGACATCATCCTACTCATGTCTGTCAACCC
TGGCTTCGGCGGGCAGAGCTTCATCCCCAGCACCCTCGACAAGCTGAGGG
AGGCACGCAAGATGATCGACGAGTCCGGCTACGACATCCGCCTTGAGGAC
TTGTGTTCAACCCTGCGACTCCTCTTGACCACGCCAAGTACGTACTGGAC
AAGGTCGACATCATCCTACTCATGTCTGTCAACCCTGGCTTCGGCGGGCA
GAGCTTCATCCCCAGCACCCTCGACAAGCTGAGGGAGGCACGCAAGATGA
TCGACGAGTCCGGCTACGACATCCGCCTTGAGGTGGACGGTGGTTGCGGT
GTAGCCAACATCAAGGAGATCGCGGAGGCGGGCGCGGACATGTTCGTCGC
GGGGTCGGCTATCTTCAACAACCCCAGGACGGAGGAAAACTACAAGGAGA
CTATCGACAAGATGCGCTCCGAGCTCGCCGACGCGACCATCGCGTAGGTG
GACGGTGGTTGCGGTGTAGCCAACATCAAGGAGATCGCGGAGGCGGGCGC
GGACATGTTCGTCGCGGGGTCGGCTATCTTCAACAACCCCAGGACGGAGG
AAAACTACAAGGAGACTATCGACAAGATGCGCTCCGAGCTCGCCGACGCG
ACCATCGCGTAG
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