mRNA_E-siliculosus-1a_M_contig76.15722.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: D8LBH9_ECTSI (Putative ankyrin protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH9_ECTSI) HSP 1 Score: 498 bits (1282), Expect = 8.050e-168 Identity = 395/407 (97.05%), Postives = 395/407 (97.05%), Query Frame = 3
Query: 285 MHFAATGGSAEVVGEIFAMAPSVINSKDDHGLTPLALALITGSHEAAARLASQGADVNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLPHSGLGPDVGLEVVMARGKELSEEHEGELRAQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRATLHGPKS 1505
MHFAATGGSAEVVGEIF MAPSVINSKDDHGLTPLALALITGSHEAAARLASQGADVNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLPHSGLGPDVGLEVVMARGKELSEEHEGELRAQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRATLHGPKS
Sbjct: 1 MHFAATGGSAEVVGEIFDMAPSVINSKDDHGLTPLALALITGSHEAAARLASQGADVNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETQSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRNKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLPHSGLGPDVGLEVVMARGKELSEEHEGELRAQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRATLHGPKS 407
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: A0A7S4D5D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5D3_HETAK) HSP 1 Score: 184 bits (466), Expect = 1.340e-49 Identity = 112/225 (49.78%), Postives = 148/225 (65.78%), Query Frame = 3
Query: 813 AVEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLPHSGLGPDVGLEVVMARGKELSEEHEGELR-AQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRA 1484
A A+LAT +G+KCAA D +G PA +AA + +L LLP +GLG + +E +M KE E A EA K A G E +T PA+ E A A K GN L +KD AGA+A Y++AIELDGSDAAF SNRSA +M K Y++AL AE+ R+L+PDWPKAC+R+AVARLAL ++EDAA+AA++G++LD +N +LKSLL+ CV +GRA
Sbjct: 8 ACAAVLATPMGKKCAARPDDRGLRPAEIAADNGFGELAAALLPDAGLG-SMTVEALMEAAKERERNAPPEPEDADEASK-----AQEFGFSVE-STDPAKDQETATQAQAIKAEGNSLFVSKDYAGAIAKYTQAIELDGSDAAFWSNRSACYMETKQYQRALASAEMARQLRPDWPKACFRLAVARLALEQYEDAAMAAFDGLKLDEENGELKSLLRKCVRRGRA 225
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: A0A836CAJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ6_9STRA) HSP 1 Score: 180 bits (457), Expect = 5.160e-48 Identity = 117/230 (50.87%), Postives = 145/230 (63.04%), Query Frame = 3
Query: 813 AVEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLP-----HSGLGPDVGLEVVMARGKELSEEHEGELRAQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKD--LAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGR 1481
AV+A+LAT VGRKCAAL + G P LAAM LVE L P G G +E +MA G + EH + A EA ++ + A A L + P + E + AA A KT GN A LA ALAAY+ A+ELD ++ + SNRSAV M++ D AL DAEV RRLKPDWPKACYRMA+AR ALG +E+AA++AWEGVQLDN NA+LK +LQ CVE+GR
Sbjct: 19 AVDALLATDVGRKCAALRNDAGMRPIDLAAMGRHRALVEKLHPVTTSNSGGGGSGETVEELMAAGLQRHREH---VEAAEAQEREAARAEAAAL--KPTRFPEASTEAKRAAEATKTEGNAAFAAAPPRLAEALAAYTRAVELDANNHVYWSNRSAVHMALGDAAAALADAEVARRLKPDWPKACYRMAIAREALGMWEEAAVSAWEGVQLDNTNAELKKVLQRCVEEGR 243
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: A0A7S2RLK0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK0_9STRA) HSP 1 Score: 165 bits (417), Expect = 6.700e-40 Identity = 194/508 (38.19%), Postives = 254/508 (50.00%), Query Frame = 3
Query: 114 NQAREEVKQLLSVAKGGSVTGVRKFVQGYVA----------------KHSESDHPL----------------TEADVLGSIRDGNGRTAMHFAATGGSAEVVGEIFAMAPSVINSKDDHGLTPLALALITGSHEAAAR---LASQ-GADVNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLPHS-GLGPDVG-LEVVMARGKEL--------------SEEHEGELRAQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGR 1481
++ R +V +LL A+ G V +R+F++ Y A + E D+P + D + +DGNGRTA+HFA+ GS EV+ I M P+ + +DD+G TPL LA + AA L S+ ADV XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEA+L T G+ CA L D++G +P LAA + +V L PHS G G V ++ V+A GK S+E +G+ ++ + + A G NT PA +PE++ A A K GN KAKD A Y+ AI+LDG+DA F SNRSA ++ +K +ALVDA CR L+PDW KAC+RMA ARLAL +EDAALAA+EG++++ +N LK L+ VE GR
Sbjct: 21 HEVRAQVARLLQAAQQGDVPELRQFLEEYSADSLREERESFGLGDGDESEEDDYPTGHFTSKKPPRPERLASIQRDAIRDFKDGNGRTALHFASNSGSCEVLRFILGMEPAAAHVRDDNGATPLHLAASCHAPTAADAFEILVSEFSADVTTVDKSGVAPVHHAAAAGNVAAIQLCFDKGSSLDAKSGAGTPLXXXXXXXXXXXXXKLISLGADVEAVNDQGLTPIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHICADMELSEGVEALLETETGKTCAKLKDARGNLPMDLAAQAGAEAIVHLLHPHSFGDGDQVQPIQQVLATGKATAAAAPSSDEASKPTSDEQQGQSTVEDDVMRE-----ADRSGWVENTEPAGSPEEKARAQALKDEGNAAFKAKDFTAASQMYTAAIKLDGADAVFWSNRSACWLELKQPRRALVDAIQCRSLRPDWAKACFRMASARLALDMYEDAALAAFEGLKMEQNNVPLKRLMNKAVELGR 523
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: A0A7S2G1E5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1E5_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.560e-31 Identity = 69/130 (53.08%), Postives = 89/130 (68.46%), Query Frame = 3
Query: 1092 NTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGR 1481
NT E+P AA K GND KAK A+ AY+ AI+LDG+DA F SNRSA ++ + + ++AL DAE CRRL+P W KACYRMA ARLAL +ED+ALAA+EG++LD+ N LK ++ VE GR
Sbjct: 4 NTCAPESPAAAAAAQELKGEGNDAFKAKQYKEAVDAYTAAIKLDGTDAVFWSNRSACWLELNEPQRALADAEQCRRLRPTWAKACYRMAAARLALKLYEDSALAAFEGLKLDDKNESLKKIMNKAVELGR 133
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: A0A7S2ASN0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ASN0_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.300e-29 Identity = 67/118 (56.78%), Postives = 84/118 (71.19%), Query Frame = 3
Query: 1131 AVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRA 1484
A AK +GN+ + KD A AY+EAI + DA+F SNRSA ++SM E AL DAE C +L+PDW KA YR+A ARLAL RFEDAALAA+EG++LD+ N LK L+ T VE+GRA
Sbjct: 17 AAEAKGKGNEAFQKKDFPSAAEAYTEAIYMVPGDASFWSNRSACYLSMGQNELALSDAERCCKLRPDWSKAYYRVATARLALKRFEDAALAAFEGLKLDDKNTTLKKLMNTAVEQGRA 134
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: W7TSF6_9STRA (Ankyrin repeat family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF6_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.760e-29 Identity = 94/226 (41.59%), Postives = 128/226 (56.64%), Query Frame = 3
Query: 816 VEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLPHSGLGPDVGLEVVMARGKELS---EEHEGELRAQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRA 1484
V+AILAT A+ +S+ P HLAA ++ D+VETLLP+S + V E +M+ G+ + EE +G L+ + G+ PA + E A+ K N A + AL Y E+I L+G D+A SNRS + + E AL DAE R LKP WPKAC+RMA ARLAL R+EDAALAA+EG+QLD+ N L ++L+T +E GRA
Sbjct: 274 VQAILATGAPGVACAVQESENGKPIHLAAWAAHKDVVETLLPYSDVKETV--EELMSWGRARAAAYEEEKGRSSDHTMLQPEQDSRHSSGVH---LPPPAASAADVETALRLKETANRHYVAGEYGQALPLYDESIGLNGRDSALWSNRSGCLLKLGRPEDALRDAETARALKPGWPKACFRMAEARLALKRYEDAALAAYEGIQLDSGNQALHNILKTAIELGRA 494
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: A0A7S0SRZ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRZ6_9STRA) HSP 1 Score: 127 bits (320), Expect = 7.570e-28 Identity = 89/229 (38.86%), Postives = 125/229 (54.59%), Query Frame = 3
Query: 813 AVEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLPHSGLGPD--VGLEVVMARGKELSEEHEGELRAQEALK----KPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGR 1481
AV I+ + G CA L G +P HLAAMS +++E L+P + + D + V K L E GE R K K S + E N P + E + A K GN + A+ Y++ IELD ++ SNRSA ++ +KDY+ +L DAE+CRRL P WPK CYR+A AR AL +EDAA+AA+EG++LDN+N +LK ++Q V+ GR
Sbjct: 207 AVALIIKSIDGINCANLETIDGNLPIHLAAMSKYEEIIEILIPVTSVINDKYIDSSTVDIINKLLIE---GEERLHHWHKNNNNKSSXXXXXNNISE--NIKPIDE-ETKAEAEKYKQSGNTYYSNRQYNEAIKEYTKGIELDQTNQVLWSNRSASYLQIKDYQNSLKDAEICRRLDPTWPKGCYRLAAARFALELYEDAAVAAYEGLKLDNNNKELKKIIQDAVKLGR 429
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: A0A6P5GDA3_ANACO (ankyrin-2 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GDA3_ANACO) HSP 1 Score: 121 bits (304), Expect = 1.250e-25 Identity = 78/213 (36.62%), Postives = 119/213 (55.87%), Query Frame = 3
Query: 867 DSQGRVPAHLAAMSSRTDLVETLLPHSGLGPDVG---LEVVMARGKELSEEHEGELRAQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRATLHG 1496
D G P +AA+ D VE LLP + P + ++ V+ + + +G ++ + ++G + S +PE + A+ AK+RG+D K+KD A+ AY++AIELD S+A F SNRS ++ + E+AL DA+ CR L+PDWPKACYR A L RF++AA A +EGV+LD +N +L + + V+ GR HG
Sbjct: 250 DEDGLKPIQVAALRGNRDAVEVLLPLTSPVPSISNWSVDGVIEYMMSQTSKEQGNMKER---------CLSEGTNLQKLKSVEVSPEAKSRALEAKSRGDDAFKSKDYQMAIDAYTQAIELDPSEATFLSNRSLCWIRLGQGEQALADAKACRELRPDWPKACYREGAALRLLQRFDEAANAFYEGVKLDPENKELVAAFREAVDAGRR-FHG 452
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Match: UPI000B8CC2F8 (ankyrin-1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CC2F8) HSP 1 Score: 119 bits (297), Expect = 5.740e-25 Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 3
Query: 1101 PAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRATLHG 1496
P +PE ++ AV AK+RG++ + KD A+ AY++AI+LD +DA F SNRS ++ + E+ALVDA+ CR L+PDWPKACYR A L RF++AA A +EGV+LD +N +L S + VE GR HG
Sbjct: 281 PEVSPEAKKKAVEAKSRGHEAFERKDYHMAIDAYTQAIDLDPTDATFFSNRSLCWLRLGQAERALVDAKACRELRPDWPKACYREGAALQLLQRFDEAANAFYEGVKLDPENKELISAFREAVEAGRK-FHG 411 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig76.15722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig76.15722.1 >prot_E-siliculosus-1a_M_contig76.15722.1 ID=prot_E-siliculosus-1a_M_contig76.15722.1|Name=mRNA_E-siliculosus-1a_M_contig76.15722.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=479bp MSPDLSKEEKLDVANQAREEVKQLLSVAKGGSVTGVRKFVQGYVAKHSESback to top mRNA from alignment at E-siliculosus-1a_M_contig76:172198..179523- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig76.15722.1 ID=mRNA_E-siliculosus-1a_M_contig76.15722.1|Name=mRNA_E-siliculosus-1a_M_contig76.15722.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7326bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig76:172198..179523- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig76:172198..179523- >mRNA_E-siliculosus-1a_M_contig76.15722.1 ID=mRNA_E-siliculosus-1a_M_contig76.15722.1|Name=mRNA_E-siliculosus-1a_M_contig76.15722.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2874bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig76:172198..179523- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |