mRNA_E-siliculosus-1a_M_contig76.15704.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: D8LBJ6_ECTSI (Aspartate/glutamate/uridylate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ6_ECTSI) HSP 1 Score: 312 bits (799), Expect = 1.250e-105 Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 1
Query: 1 PPHPLHPTNETCREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRWLLLAGETEGVFGGDGACVAEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTLLLAAGREGQEPTQG 498
P P P +ETCREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRWLLLAGETEGVFGGDGACV EISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGL+PGGVKRTLLLAAGREGQEPTQG
Sbjct: 3 PTLPFAPNDETCREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNRWLLLAGETEGVFGGDGACVPEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLTPGGVKRTLLLAAGREGQEPTQG 168
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: A0A6H5JTJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ8_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.010e-54 Identity = 115/141 (81.56%), Postives = 117/141 (82.98%), Query Frame = 1
Query: 211 NRWLLLAGETEGVFGGDGACVAEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTLLLAAGREGQEPTQGGXXXXXXXXXXXTTGGLGTVIVASATTAAAVAPVVSTAVDGEAGG 633
+RWLLLAGETEGV GGDGACV EISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTLLLAAGR+GQEPTQGG XXXXXXXXX VAP VSTAV GEAGG
Sbjct: 129 DRWLLLAGETEGVLGGDGACVPEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTLLLAAGRDGQEPTQGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPTVSTAVVGEAGG 269
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: A0A6H5JTV2_9PHAE (Isopentenyl phosphate kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV2_9PHAE) HSP 1 Score: 124 bits (311), Expect = 3.470e-33 Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 1
Query: 34 CREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR 216
REIREAISEWDDTTRVIVGHGSGS+GHVAAAKHSTIDGVSGA+QWRGFCDVSDAASRLNR
Sbjct: 37 AREIREAISEWDDTTRVIVGHGSGSYGHVAAAKHSTIDGVSGAIQWRGFCDVSDAASRLNR 97
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: A0A160T015_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Candidatus Promineofilum breve TaxID=1806508 RepID=A0A160T015_9CHLR) HSP 1 Score: 122 bits (306), Expect = 1.620e-30 Identity = 80/211 (37.91%), Postives = 98/211 (46.45%), Query Frame = 1
Query: 67 DDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR--------------------------------------------------------------------------------WLLLAGETEGVFGGDGACVAEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTLL 459
D R+++GHGSGSFGHVA A+H T GV G QW GF +V+DAA+RLNR W LLAGETEGV G+G + I+ +LPS +LGGSRGTDVTGGMA+KV M++LVE+ PG IRIFSGL PG + R L+
Sbjct: 42 DPQLRLVLGHGSGSFGHVAGARHGTRAGVVGPAQWAGFAEVADAAARLNRHVIAALLAAGVPAVGLPPSASALVSDGYIRELAVAPIQAALAAGVTPVVFGDVAFDAARGGTIISTEEVMDYLAARLRPAWFLLAGETEGVLDGEGNLIPLITASNLPSYLPALGGSRGTDVTGGMAAKVAAMVALVEANPGLAIRIFSGLIPGLLTRLLV 252
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: A0A7C3H372_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3H372_9CHLR) HSP 1 Score: 122 bits (306), Expect = 1.700e-30 Identity = 85/221 (38.46%), Postives = 101/221 (45.70%), Query Frame = 1
Query: 34 CREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR--------------------------------------------------------------------------------WLLLAGETEGVFGGDGACVAEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTL 456
EI++A D R+++GHGSGSFGHVA AK+ T GV A QWRGF +VS AA RLNR WLLLAGETEGV G + I E+LP +E +LGGSRGTDVTGGMA+KVRDM++LV P RIRIFSGL+P + R L
Sbjct: 31 AEEIQQARQANPDL-RLVLGHGSGSFGHVAGAKYGTRQGVRTAQQWRGFAEVSAAALRLNRLVTEALLAAGVPAVSLQPCASVVCEDGRITAIAAHPIQAALTSGLLPVIHGDVAFDTVRGGTIVSTEEVMMALVETLRPSWLLLAGETEGVLDLAGQVIPRIMPETLPQVEAALGGSRGTDVTGGMAAKVRDMLALVTEQPAMRIRIFSGLTPDLLPRVL 250
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: A0A2E0ZCB3_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZCB3_9CHLR) HSP 1 Score: 122 bits (307), Expect = 2.250e-30 Identity = 83/220 (37.73%), Postives = 104/220 (47.27%), Query Frame = 1
Query: 40 EIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR--------------------------------------------------------------------------------WLLLAGETEGVFGGDGACVAEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTLL 459
EI +A E + R+++G GSGSFGHVAAAKH T GV+ A WRGF +VSDAA+RLNR WLLLAGET GV+ + ++ IS + IE +LGGSRGTDVTGGMASKV+ M++LV++ P IRIFSGL PG + +TLL
Sbjct: 60 EIAQARRE-NPALRLVLGQGSGSFGHVAAAKHGTRHGVTDAAGWRGFAEVSDAAARLNRMVVSELLLVGVPAVSLSPSASVGCVDGRIQTIAVQPVQAALAAGLVPVVYGDVAFDSVRGGTIVSTEEVMMALVAEIRPSWLLLAGETTGVYDLEEQVISRISRANYAEIEAALGGSRGTDVTGGMASKVQSMLALVDAFPQLAIRIFSGLEPGNLAQTLL 278
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: A0A6L3F9Z2_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F9Z2_9CHLR) HSP 1 Score: 116 bits (290), Expect = 3.750e-28 Identity = 78/221 (35.29%), Postives = 101/221 (45.70%), Query Frame = 1
Query: 34 CREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR--------------------------------------------------------------------------------WLLLAGETEGVFGGDGACVAEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTL 456
C+EI + + + ++++GHGSGSFGHVAAAK+ T GVS +W GF +VS AA+RLNR WLLLAGET GV +G + +I+ ESLP I +LGGSRGTDVTGGMASKV M+ L++ IRIFSGL+ G ++ TL
Sbjct: 32 CQEIAD-FRQTNPEIKLLMGHGSGSFGHVAAAKYGTRQGVSSPSEWAGFSEVSSAAARLNRIVVDALQEAGVPALTLQPSASVVCENGRIAQIATTPIQHALDAGLLPVVHGDVAFDTVRGGTIISTEEVMMAVAETLQPSWLLLAGETAGVLDQNGTIIPKITRESLPEIASALGGSRGTDVTGGMASKVNSMLQLIDEHSQLNIRIFSGLNEGQLRTTL 251
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: A0A3B0VP81_9ZZZZ (Isopentenyl phosphate kinase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0VP81_9ZZZZ) HSP 1 Score: 113 bits (283), Expect = 5.910e-27 Identity = 80/220 (36.36%), Postives = 98/220 (44.55%), Query Frame = 1
Query: 40 EIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR--------------------------------------------------------------------------------WLLLAGETEGVFGGDGACVAEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTLL 459
EI EA + + + R+++GHGSGSFGHVAAAKH T GV+ WRGF +V DAA+RLNR WLLLAGET GV+ + IS + + LGGSRGTDVTGGMASKV+ M+SL+E P IRIFSGL V++TLL
Sbjct: 45 EIAEARRK-NGSLRLLLGHGSGSFGHVAAAKHGTRQGVATPAGWRGFAEVGDAAARLNRLLMTALLAAGLPAVSLPPSASAVCKNGRIQQIGVENVAAALDAGLLPVVYGDVAFDSVRGGTIVSTEEVMMAMVGRLRPSWLLLAGETAGVYDRQQQVIPTISQTNYAEVATVLGGSRGTDVTGGMASKVQGMLSLLEQFPHLSIRIFSGLESNNVRQTLL 263
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: A0A399Z2D2_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A399Z2D2_9CHLR) HSP 1 Score: 112 bits (279), Expect = 1.600e-26 Identity = 76/207 (36.71%), Postives = 90/207 (43.48%), Query Frame = 1
Query: 79 RVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR--------------------------------------------------------------------------------WLLLAGETEGVFGGDGACVAEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTLL 459
R+++GHGSGSFGHVA KH T GV QW GF +V+DAA+RLNR W L+AGET GVF VAEI+ + I +LG SRGTDVTGGMASKV MI LV+S PG +RIFSGL PG + R L+
Sbjct: 47 RLVLGHGSGSFGHVAGKKHGTRQGVKTPAQWTGFAEVADAAARLNRHVIAALLKEGVPAFGLPPSASAQVMDGQVEFLMSEQIEKSLDVGLLPVVFGDVAFDAVRGGTIISTEEVMEFLSGGLRPAWFLMAGETTGVFDVHNQVVAEINRVNFQDILPALGASRGTDVTGGMASKVSSMIDLVQSQPGMTVRIFSGLEPGLLHRLLV 253
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Match: A0A0S8AVD4_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineae bacterium SG8_19 TaxID=1703386 RepID=A0A0S8AVD4_9CHLR) HSP 1 Score: 110 bits (275), Expect = 6.460e-26 Identity = 77/225 (34.22%), Postives = 96/225 (42.67%), Query Frame = 1
Query: 25 NETCREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGVSGAVQWRGFCDVSDAASRLNR--------------------------------------------------------------------------------WLLLAGETEGVFGGDGACVAEISLESLPSIEGSLGGSRGTDVTGGMASKVRDMISLVESLPGARIRIFSGLSPGGVKRTLL 459
N EIREA+S + ++++GHGSGSFGHVAA K+ T G+ QW+GF +VS AA+RLN WLLLAGETEGV DG + I+ ++ I+ L GSRGTDVTGGMASKV M+ LVE P + IFSGL G + LL
Sbjct: 31 NRLVSEIREALSSKPEL-QLVLGHGSGSFGHVAANKYGTRQGIHTQDQWKGFAEVSSAAARLNAQVRESLLVKNVPAVSLQPSASAECRKGRIVNMGTTQVKAAIEAGLVPIVYGDVAFDSVLGGTIISTEEILSFLAADLRPTWLLLAGETEGVLSDDGRIIPLITKSNIGQIQNQLSGSRGTDVTGGMASKVNQMLELVEKDPNLSVLIFSGLKGGNISGRLL 254 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig76.15704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig76.15704.1 >prot_E-siliculosus-1a_M_contig76.15704.1 ID=prot_E-siliculosus-1a_M_contig76.15704.1|Name=mRNA_E-siliculosus-1a_M_contig76.15704.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=217bp PPHPLHPTNETCREIREAISEWDDTTRVIVGHGSGSFGHVAAAKHSTIDGback to top mRNA from alignment at E-siliculosus-1a_M_contig76:35484..38010- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig76.15704.1 ID=mRNA_E-siliculosus-1a_M_contig76.15704.1|Name=mRNA_E-siliculosus-1a_M_contig76.15704.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2527bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig76:35484..38010- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig76:35484..38010- >mRNA_E-siliculosus-1a_M_contig76.15704.1 ID=mRNA_E-siliculosus-1a_M_contig76.15704.1|Name=mRNA_E-siliculosus-1a_M_contig76.15704.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1302bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig76:35484..38010- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |