mRNA_E-siliculosus-1a_M_contig750.15687.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: A0A4Y2BG90_ARAVE (Uncharacterized transposon-derived protein F54H12.3 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2BG90_ARAVE) HSP 1 Score: 107 bits (267), Expect = 2.160e-24 Identity = 72/214 (33.64%), Postives = 116/214 (54.21%), Query Frame = 1
Query: 1 QMDLMDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEFKGP-VKTYMNDKNFSLFYANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIGVTPHTSFISKKPRKTP-----IARKKQTKKSFKIGDTVRILEKKGLFDKGSQANKFSASVYEITK 624
Q DL+D++ + NS YKY+L +D+FS++ WA LK+K S+L +E E K + + D G EFK V+ Y+ + N F N +++ IVER RTL +LT+ ++ K+ID + ++ SYN++ H SI + P++ I + ++ +K K SFK+GDTVRI KG F+KG + N +S ++ + K
Sbjct: 73 QADLLDMQFVSKFNSGYKYLLTCIDVFSKFAWAIPLKDKTDQSILNGFKEIFKERKPQF------LQTDKGTEFKNRLVQNYLKEMNVHFFTTN----NETKASIVERFHRTLMSKLTRYFTEYNTRKYIDVIAKLIFSYNHTWHRSIKMEPYSVNIDTQAEVWQNLYGVLSEQKSEKPSFKVGDTVRISNWKGRFEKGYE-NNWSLEIFTVHK 275
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: A0A8B6G0W8_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6G0W8_MYTGA) HSP 1 Score: 99.8 bits (247), Expect = 3.360e-21 Identity = 70/213 (32.86%), Postives = 118/213 (55.40%), Query Frame = 1
Query: 34 RQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEFKGPVKTYMNDKNFSLFYANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIG-VTPHTS-------------FISKKPRKTPIARKKQTKK--SFKIGDTVRILEKKGLFDKGSQANKFSASVYEITK 624
+ NS K++L+++DIFSR++ LK+KK +V L+E FK + K ++ D GGEF+ VK Y+ + ++FY + +K ++ ER IRTL+ R+ + + K+ID L +V SYNN+ H S+G TP + + KK + + ++K+ K+ FKIGD VRI + K +F+KG Q N ++ ++++K
Sbjct: 98 KYNSDIKFLLILIDIFSRFLIVKPLKDKKSDTVTSALKEI---FKTGNRRPK-TVRFDLGGEFQSSVKKYLKKEKINVFYTH---NSKIKSNYAERVIRTLKNRIYSYFMENQTSKYIDVLQKLVNSYNNTPHQSLGGATPASVTKINEDEIRYIQYLVRKKAKSIEVIKRKKKKQVYKFKIGDIVRISQLKRVFEKGYQEN-WTLEYFKVSK 302
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: A0A8B6F612_MYTGA (Integrase catalytic domain-containing protein n=5 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6F612_MYTGA) HSP 1 Score: 98.6 bits (244), Expect = 4.690e-21 Identity = 68/218 (31.19%), Postives = 112/218 (51.38%), Query Frame = 1
Query: 4 MDLMDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEFKGP-VKTYMNDKNFSLFYANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIGVTPHTSFISKKP----------RKTPIARKKQTKKSFKIGDTVRILEKKGLFDKGSQANKFSASVYEITK 624
+DLMD+ K + NS Y ++LV++DIFS+Y+W LKNKK SV L+ + E ++ + D G EF+ V++ + KN +A T+ + VER I+T++ ++ + + +K S ++D L SYN + H +IG+ P ISK+ R P K + FKIGD VRI + F + K+S +++I++
Sbjct: 80 VDLMDMSKFSKFNSGYNFILVVIDIFSKYVWLRPLKNKKGESVANALKHVLSEG-----RSPNRIRTDKGQEFRSRLVESLLKQKNIQHLFAQ---NTEIKANYVERVIKTIKSKIMRFITSKQSYDYVDNLQNFANSYNKTFHRTIGMAPDKVNISKETNLWWKMYWPKRLQPKTEKARKPFRFKIGDKVRITYIRNPFTR-EYDEKWSGEIFKISQ 288
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: A0A0R3QSP5_9BILA (Integrase catalytic domain-containing protein n=1 Tax=Brugia timori TaxID=42155 RepID=A0A0R3QSP5_9BILA) HSP 1 Score: 97.4 bits (241), Expect = 9.020e-21 Identity = 74/220 (33.64%), Postives = 109/220 (49.55%), Query Frame = 1
Query: 1 QMDLMDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEFKGP--VKTYMNDK-NFSLFYANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIGVTP---------HTSFISKKPRKTPIARKKQTKKSFKIGDTVRILEKKGLFDKGSQANKFSASVYEITK 624
QMDLMD +K R+NS + +VL+++DIFS+++W Y LK+K V L++ I PK ++ D+G EF + Y +K NF Y + K I ER IRT++ +L + AK S KW L + + YN H + G+ P F K K P+ K +K+GD VRI + K +FDKG N +S ++ I K
Sbjct: 31 QMDLMDFQKFKRKNSGHTFVLLVIDIFSKFIWLYPLKDKTGLEVAKALQDIIRSCPFGPPK---NLQADEGKEFINVHCKEIYKKEKINFYHVYTHLK------AAIAERAIRTIKSKLYRYFTAKGSYKWTGILQDIAREYNKRIHRTTGMAPVKVKTREDEKKVFDYLKVPKFPVKLPK-----YKVGDMVRISKYKAIFDKGYTPN-WSTELFTIHK 235
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: A0A4Q3L862_9FLAO (Transposase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A4Q3L862_9FLAO) HSP 1 Score: 97.4 bits (241), Expect = 9.020e-21 Identity = 74/214 (34.58%), Postives = 107/214 (50.00%), Query Frame = 1
Query: 4 MDLMDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEFKGPV---KTYMND-KNFSLFYANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIGVTPHTSFISKKPRKTP-----IARKKQTKKSFKIGDTVRILEKKGLFDKGSQANKFSASVYEI 618
+DL D+ + QN +K++LV VDIFSR+ W LK K A V E I K P+ ++ +D GGEF V K +D K +S + + + + ER I+TL+ + K + + +W+D L +V YNN H+SIG+TP ++ P I K K +KIGD VRI KG F+KG N FS +Y+I
Sbjct: 32 LDLADMAEWSSQNDGFKFILVCVDIFSRFAWCVPLKTKNAAEVWSAFESVIKHNK---PR---NIWVDRGGEFYNKVWDVKLKNDDIKRYSTY-------GEYKVSMAERFIQTLKSHIWKQFIIRGRHEWLDILPAIVAEYNNKRHSSIGMTP---TEARDPHNAAALYALIKETKPAKPKYKIGDWVRIARIKGRFEKGFHPN-FSYEIYKI 228
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: A0A814PP29_9BILA (Hypothetical protein (Fragment) n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814PP29_9BILA) HSP 1 Score: 96.7 bits (239), Expect = 1.090e-20 Identity = 69/217 (31.80%), Postives = 112/217 (51.61%), Query Frame = 1
Query: 1 QMDLMDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEFKG-PVKTYMNDKNFSLFYANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIGVTPHTSFISKKPR--KTPIARKKQTKK------SFKIGDTVRILEKKGLFDKGSQANKFSASVYEITK 624
Q DL+D+ K ++N YK++L ++D+FS++ W LKNK S+L + FK P + + D G +F PV+ Y+ N + AN + + +VER RTL+E++ + K++ + LD +V SYNN+ H +I TP+ + + + K T +FKIGD VRI + KGLF+KG N ++ ++ I K
Sbjct: 67 QADLVDVSKISKENKGYKFLLTVIDVFSKFAWVKPLKNKTSESILQAMTRI---FKSRKP---LKLQTDKGRKFLNKPVQDYLKKINVHFYTAN----SNLKASVVERLNRTLKEKMWRYFTYKNNHDYTKVLDNLVDSYNNTFHRTIKTTPNNVLYKNEEKVFENICGYDKNTGDDSVLTLNFKIGDKVRISKTKGLFEKGYTPN-WTREIFVIDK 272
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: A0A6S7FRB5_PARCT (Uncharacterized transposon-derived n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FRB5_PARCT) HSP 1 Score: 97.4 bits (241), Expect = 1.970e-20 Identity = 72/221 (32.58%), Postives = 115/221 (52.04%), Query Frame = 1
Query: 1 QMDLMDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEF-KGPVKTYMNDKNFSLFYANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIGVTP------------HTSFISKKPRKTPIARKKQTKKSFKIGDTVRILEKKGLFDKGSQANKFSASVYEITK 624
QMDL D++ + N Y+Y+LV +D+FS+Y W +K+K +++ + + +K P+ + D G EF P +T +N +N LF N + TK+ +VER IRT + ++ + AK +++++D L +V SYNNS H SI P HT + S P+ K FKIGD VR+ + K F+KG N FS ++ ++K
Sbjct: 84 QMDLADMQSLKQYNDGYRYLLVCIDVFSKYAWLVPIKSKTGPAIVEAFKVILSSGRK--PQ---KIMTDQGTEFFNKPFQTLLNGENIQLF--NTFNETKA--SVVERVIRTFKAKMWRYFTAKKTMRYVDMLPDLVYSYNNSRHRSIKTKPALVNAENEDDVFHTLYGSVFDNLQPV------KYKFKIGDKVRVSKIKRKFEKGYLPN-FSKEIFTVSK 288
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: UPI000B9359E2 (uncharacterized protein LOC111036422 n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B9359E2) HSP 1 Score: 97.8 bits (242), Expect = 2.110e-20 Identity = 69/213 (32.39%), Postives = 113/213 (53.05%), Query Frame = 1
Query: 1 QMDLMDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEFKGP----VKTYMNDKNFSLFYANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIGVTPHTSFISKKPRKTPIARKKQTKKS-FKIGDTVRILEKKGLFDKGSQANKFSASVYEITK 624
Q DL+++ R+N +YKY+L ++D F+++ WA LK+K V + + + + +A + LD+G EF + T N +S F + IVER RTL+E++ + A+ S KWI L ++ YNNS H +IG+TP + ++ + + + KK+ FKIGD VRI +KG+F KG + +S ++EI K
Sbjct: 136 QADLVEMIPYSRKNKNYKYILCVIDCFTKFAWAIPLKSKTGKEVTNAMSKILID------RAPKLLQLDNGKEFYNTTFDALMTKYNIHKYSTFSV-------MKACIVERFNRTLKEKMFREFTARGSHKWISILQLLLDEYNNSKHRTIGMTPVQADLNPLSVELQLHKMNNQKKNKFKIGDNVRISTQKGVFTKGYLPS-WSTEIFEIIK 334
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: A0A8B6FB93_MYTGA (Uncharacterized protein n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6FB93_MYTGA) HSP 1 Score: 94.4 bits (233), Expect = 9.180e-20 Identity = 66/215 (30.70%), Postives = 109/215 (50.70%), Query Frame = 1
Query: 13 MDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEFKGP-VKTYMNDKNFSLFYANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIGVTPHTSFISKKP----------RKTPIARKKQTKKSFKIGDTVRILEKKGLFDKGSQANKFSASVYEITK 624
MD+ K + NS Y ++LV++DIFS+Y+W LKNKK SV L+ + E ++ + D G EF+ V++ + KN +A T+ + VER I+T++ ++ + + +K S ++D L SYN + H +IG+ P ISK+ R P K + FKIGD VRI + F + K+S +++I++
Sbjct: 1 MDMSKFSKFNSGYNFILVVIDIFSKYVWLRPLKNKKGESVANALKHVLSEG-----RSPNRIRTDKGQEFRSRLVESLLKQKNIQHLFAQ---NTEIKANYVERVIKTIKSKIMRFITSKQSYDYVDNLQNFANSYNKTFHRTIGMAPDKVNISKETNLWWKMYWPKRLQPKTEKARKPFRFKIGDKVRITYIRNPFTR-EYDEKWSGEIFKISQ 206
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Match: A0A8K0D2I3_9COLE (Uncharacterized protein n=2 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0D2I3_9COLE) HSP 1 Score: 94.0 bits (232), Expect = 1.570e-19 Identity = 71/215 (33.02%), Postives = 110/215 (51.16%), Query Frame = 1
Query: 1 QMDLMDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETIDEFKKYYPKAKISMTLDDGGEF-KGPVKTYMNDKNFSLF--YANPKDGTKSRTQIVERGIRTLRERLTKLMVAKDSVKWIDYLDTVVKSYNNSTHASIGVTPHTSFISKKPRKTPIA----RKKQTKKSFKIGDTVRILEKKGLFDKGSQANKFSASVYEITK 624
QMDL + + N +Y+Y+L++++ +S+Y+WA LK K V + E + PK +M D G EF K M + + + ++N K G I+ER IRT++ RL K + KW D L VV +YN+S H +IG+ P I+ KP T ++ K K +GD VRI + KG+F+KG N +S +++I K
Sbjct: 30 QMDLAEFIPYAKVNKNYRYILMMINCYSKYLWARPLKTKNGEEVTKVVSNIFKEEENSIPK---NMQTDHGKEFYNSSFKKLMKEHEINHYSTFSNIKAG------IIERAIRTIKNRLYKEFSLRGEYKWYDILQKVVSAYNHSKHRTIGMAP----INVKPN-TKLSVYDNLKIIGKSKLNVGDMVRISKYKGVFEKGFTPN-WSTELFKIVK 229 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig750.15687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig750.15687.1 >prot_E-siliculosus-1a_M_contig750.15687.1 ID=prot_E-siliculosus-1a_M_contig750.15687.1|Name=mRNA_E-siliculosus-1a_M_contig750.15687.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=207bp MDLMDIKKDFRQNSSYKYVLVIVDIFSRYMWAYKLKNKKPASVLPHLEETback to top mRNA from alignment at E-siliculosus-1a_M_contig750:5521..6144+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig750.15687.1 ID=mRNA_E-siliculosus-1a_M_contig750.15687.1|Name=mRNA_E-siliculosus-1a_M_contig750.15687.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=624bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig750:5521..6144+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig750:5521..6144+ >mRNA_E-siliculosus-1a_M_contig750.15687.1 ID=mRNA_E-siliculosus-1a_M_contig750.15687.1|Name=mRNA_E-siliculosus-1a_M_contig750.15687.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1242bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig750:5521..6144+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |