mRNA_E-siliculosus-1a_M_contig75.15616.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: D7G7Q4_ECTSI (Dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q4_ECTSI) HSP 1 Score: 787 bits (2032), Expect = 8.020e-284 Identity = 392/406 (96.55%), Postives = 399/406 (98.28%), Query Frame = 3
Query: 72 MRSPACSHERRTVATGRLAGMAVLLPFMTRGWAFQTSCINARAMGGARLLSSRQALTDRVPIPQQESHCPPEEEARRDHSGAEPRSFFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDLTPMEELQGVEVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHEASRTHTS 1289
MRSP+ SHERR VATGR AGMA+LLPFMTRGWAFQTSCINARA+GGARLLSSRQALTDRVP PQQESHCPPEEEA R+HS AEPRSFFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQD+ESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAA+WDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDL PMEELQG+EVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHEASRTHTS
Sbjct: 1 MRSPSYSHERRRVATGRFAGMAILLPFMTRGWAFQTSCINARAIGGARLLSSRQALTDRVPSPQQESHCPPEEEAGREHSEAEPRSFFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDRESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAADWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDLIPMEELQGLEVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHEASRTHTS 406
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: A0A6H5JD10_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD10_9PHAE) HSP 1 Score: 739 bits (1907), Expect = 2.870e-252 Identity = 377/430 (87.67%), Postives = 384/430 (89.30%), Query Frame = 3
Query: 72 MRSPACSHERRTVATGRLAGMAVLLPFMTRGWAFQTSCINARAMGGARLLSSRQALTDRVPIPQQESHCPPEEEARRDHSGAEPRSFFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDLTPMEELQGVEV---------------------------------AHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIV 1262
MRSPA SHERR VATGRLAGMAVLLPFMTRGWAFQTSCINARAMGGAR LSSRQALTDRVPIPQQESHCPPEEEA R+ S A+PR FFE+IGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDK+SDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEV IPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFD DL P+EELQGVEV AHRILSFTTEYMELVK YPAPMISIKGHLFKMLYRLLECHHDLRARLGHY CDA+EADVI+
Sbjct: 1 MRSPAYSHERRRVATGRLAGMAVLLPFMTRGWAFQTSCINARAMGGARFLSSRQALTDRVPIPQQESHCPPEEEAGRERSEADPRGFFERIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKDSDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVAGIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDRDLIPIEELQGVEVRRVSSFSCYSARRTPRMFFTCLTINAGLPGPQVAHRILSFTTEYMELVKLYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYHCDAMEADVIM 430
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: A0A836CKE0_9STRA (tRNA-dihydrouridine synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE0_9STRA) HSP 1 Score: 362 bits (929), Expect = 7.340e-119 Identity = 186/300 (62.00%), Postives = 224/300 (74.67%), Query Frame = 3
Query: 330 FFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDLTPMEELQGVEVAHRILSFTTEYMELVKRYPAPMIS---IKGHLFKMLYRLLECHHDLRARL 1220
F++ IG P Y+AAPMVEQSE AFR L RRHGC LAYTQMLHA++F+ A KFR G D +EDRPLI QFCGN+P+ +V+AAR+VEH+ +A DLNLGCPQ+IAKKGNYGAYLLP LCE ++ AM+ +L+ PVTVKIR +T+ LA RLEGAG QL+TVHGRTV S KT G A+W IIR+VK + IPVVANGGIET ADAER L TGADA+MSSE LLE+PALFD L + E+ G +A R L+ EY++LV+ YP P I ++ HLFKML+RLL CH DLR RL
Sbjct: 1 FYKAIGSPTYVAAPMVEQSEKAFRLLCRRHGCDLAYTQMLHAQQFSMLKAAKFRCVCCGGEDPQEDRPLIAQFCGNDPELLVKAARYVEHQVEACDLNLGCPQQIAKKGNYGAYLLPQGDLCERLIDAMASQLACPVTVKIRCLSTVEETVKLALRLEGAGVQLITVHGRTVRSAKTDNGPADWSIIREVKAALRIPVVANGGIETFADAERCLALTGADAIMSSEALLEDPALFDRSLPGLHEVSGAALAQRQLALAGEYLQLVQLYP-PAIGAGPVRAHLFKMLHRLLGCHTDLRGRL 299
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: A0A7S2C8F7_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C8F7_9STRA) HSP 1 Score: 319 bits (818), Expect = 3.320e-100 Identity = 189/410 (46.10%), Postives = 239/410 (58.29%), Query Frame = 3
Query: 294 ARRDHSGAEPRSFFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGV--DDE-----EDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDLTPMEELQGVE-----------------------VAHRILSFTTEYMELVKRYPAPMI--SIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHEASRTHTSLCHRYFFDPDTRTPLDGAMD----------TSDLRVSPKQWYRRHR 1397
AR D + F E++G PK++AAPMV QS+ AFR LVRRHG LA+TQMLHA+ FA ++R FDG DD+ EDRPLI QFCGN+P TVV AA +++ DA+DLNLGCPQKIAKKG YGA+LL P L IV M+ L VP+TVKIR + +T+ A L+ AGA ++TVHGRTV K A+W ++R V+E + IPVVANGGIET +DA R L ETGAD VMSSE LLENP LF + ++L G E VA R LS+ EY+ L +PA + + KGH FKMLYRLLE H D+R RL + A +D+ +L RY R P++ + D ++ L V+ K WYRRHR
Sbjct: 46 ARADAQPTDGSPFLERLGHPKFVAAPMVGQSDLAFRLLVRRHGADLAFTQMLHAKNFA--TVPRYREDNFDGFLRDDQSTYAMEDRPLIAQFCGNDPGTVVEAASYIQDHVDAIDLNLGCPQKIAKKGRYGAFLLSEPVLVRSIVERMATSLDVPITVKIRMLPTKEETVQFACMLQDAGAAMVTVHGRTVKQNKNLSERADWSVVRAVREALTIPVVANGGIETTSDALRCLVETGADMVMSSEALLENPGLFQQNTDHSQDLVGSEGGALNGGTSRSEMDYSEWCEAQLVAARQLSYMREYIALSTLFPARDVIGTTKGHAFKMLYRLLEVHTDVRERLVRMRNLADLSDIT--------DTLAARY------RLPVEASPDELRGFRCDDQSTPLHVAAKTWYRRHR 439
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: A0A7S3UVI5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI5_HETAK) HSP 1 Score: 300 bits (767), Expect = 6.120e-93 Identity = 178/393 (45.29%), Postives = 229/393 (58.27%), Query Frame = 3
Query: 372 MVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEE--DRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSV---PVTVKIRA---QDKESD---TLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFD---SDLTPMEELQGVEVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIV--HEASR-----------------THTSL-CHRYFFDPDTRTPLDGAMDTSDLRVS-------------PKQWYRRHRKDET 1409
MV+QS+ AFR L R++G LAYTQMLH+ F+ + FR FDG+D EE DRPLI QF GN P+TVV+AA+++EH+ DA+DLN GCPQ+IA+KGNYGA+LL N LC +V+A++ + P TVK+R D D T+ A+R+ GAQLL +HGRTV KT G+A+W++IR VK+ VDIPV+ANGGIE D +R L+ TGADAVMSSE LLENP LFD S + L G AHR L EY+ELV R+P + K H+FK LYRL E DLRA+ G E V++ ASR H SL H+ + P D + + D +S P WYRRHR ++T
Sbjct: 1 MVQQSDLAFRLLCRKYGTTLAYTQMLHSSHFSTPSNSFFRETNFDGLDPEETIDRPLIAQFNGNVPETVVKAAKYIEHQVDAIDLNFGCPQQIARKGNYGAFLLENEDLCAALVSALASRPAASTCPPTVKMRCLPGPDGRPDLERTVAFAQRMAAEGAQLLCLHGRTVEQSKTNAGSADWEVIRLVKQEVDIPVIANGGIENFDDVQRCLQITGADAVMSSEALLENPMLFDPARSSAAALAALDGAGWAHRQLGLALEYLELVARHPTHYGTFKSHVFKFLYRLFEEQKDLRAKFGDKSTAMFEDMVVIILEMASRYGYHAAFDRELLENICSNHKSLNYHQKKYRRQISDPYDAVLGSLDSMISRSKENAKRMPPIAPTSWYRRHRGEDT 393
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: W7TKF8_9STRA (Dihydrouridine synthase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKF8_9STRA) HSP 1 Score: 296 bits (757), Expect = 4.460e-90 Identity = 174/374 (46.52%), Postives = 231/374 (61.76%), Query Frame = 3
Query: 342 IGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGV----DDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALF--------DSDLTPME----ELQGVEVAHRILSFTTEYMELVKRY--PAPMISIKGHLFKMLYRLLE--CHHDLRARLGHYQCDAIEADVIVHEASRTHTSLCHRYFFDPDTRTPLDGAMD-TSDLRVSPKQWYRRHRK 1400
+G P++IAAPMV+QS+ AFR LVRR+G LAYTQM HA FA N + +R +DG+ ++ DRPLI QF G++ D +VRAA ++H DAVDLNLGCPQ+IAK+G+YGAYLL L +++ M + L+VPVT KIR E DTL+L + +E AG LLT+HGRT K G A+W I K+K IPVVANGG+ET DA TGADAVMSSEGLLENP+LF + + M+ E++ +AHR L+F EY+EL K++ + ++KGHLFKMLY +LE ++DLR +LG + + +V E T RY + +D A+ T VSP WYRRHR+
Sbjct: 126 LGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFA--NVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLET------RY-------SSIDVAIVLTKGAIVSPVSWYRRHRE 484
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: A0A3R7YT01_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7YT01_9STRA) HSP 1 Score: 287 bits (735), Expect = 1.230e-88 Identity = 164/360 (45.56%), Postives = 217/360 (60.28%), Query Frame = 3
Query: 330 FFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALF-DSDLTPMEELQGVEVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHEASRTHTSLCHRYFFDPDTRTPLDGAMDTSDLRVSPKQWYRRHRKDE 1406
F+ IG PK I APMV+QSE AFR L R G YT MLH+ F + ++R + F+ +DRPLIVQFCGN+P TV+ AA+ VE CDAVDLNLGCPQ IA+KG+YG++L+ + + IV +SR L++PVTVKIR + +++TL+ A LE AG LLTVHGRT KT NWDIIR++KE + IPV+ANGG+ET D R LE TG D VMSSEGLLENPALF DS+ P ++ +++A + L + T Y PA ++ HLFKML++ L H DLR L + D++ A R + D + + T + S WYRRHR+ +
Sbjct: 18 FYRAIGSPKRIVAPMVDQSELAFRMLCRTLGADCCYTPMLHSRLFT--ESVEYREKMFEHH--LQDRPLIVQFCGNDPKTVLMAAKMVESHCDAVDLNLGCPQGIARKGHYGSFLMHDKNTVKSIVETLSRGLTIPVTVKIRVFNDDNETLEFAEMLEKAGCDLLTVHGRTKEMNKTAVQEVNWDIIRRIKERLSIPVIANGGLETHEDIARCLEATGCDGVMSSEGLLENPALFADSNNKPGQDTSFLQLARQYLEYATLYP------PANDKIVRAHLFKMLFQDLRVHSDLRDALAAAKSQKEMVDIVDELAVRLKKA--------EDDKATSEIKKTTYAMETS---WYRRHRQGQ 356
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: A0A8K1CA77_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA77_PYTOL) HSP 1 Score: 285 bits (729), Expect = 9.310e-88 Identity = 166/359 (46.24%), Postives = 211/359 (58.77%), Query Frame = 3
Query: 330 FFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDLTPMEELQGVEVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHEASRTHTSLCHRYFFDPDTRTPLDGAMDTSDLRVSPKQWYRRHRKDE 1406
FF IG P+ + APMV+QSE AFR L RRHG L YT M H+ FA + ++R + F+ +DRPLIVQFCGN+P TV+ AARHVE CDAVDLNLGCPQ IA+KG YG++L+ DIV +S+ LS+PVTVKIR +TL+ A ++ AGA LL VHGRT KT A+WDIIR++KE + IPV+ANGGIE D ER L+ T AD VMSSE +LENPALF +D VE+A + L T EY PA I+ HLFK++++ L H DLR L A D +V L + P + ++TS WYRRHR+ +
Sbjct: 29 FFRAIGSPQRVVAPMVDQSELAFRMLTRRHGAELCYTPMFHSRLFA--ESAEYRAKMFEKH--IKDRPLIVQFCGNDPQTVLAAARHVEGHCDAVDLNLGCPQGIARKGRYGSFLMKEKDTVRDIVTTLSQNLSIPVTVKIRIFPDRQETLEFADMIQAAGADLLCVHGRTKEMNKTAVKEADWDIIREIKERLSIPVIANGGIELPEDVERCLQVTKADGVMSSEAILENPALFSTDKEASYSF--VEMAKQYLDATLEYP------PASDKIIRAHLFKIIFQDLCVHTDLRTDLA----KAPNRDAMVKIVEELEKRLAEK---------PGEYKVETS--------WYRRHRRSQ 354
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: A0A2D4BU30_PYTIN (Dus domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU30_PYTIN) HSP 1 Score: 283 bits (723), Expect = 1.230e-86 Identity = 162/359 (45.13%), Postives = 207/359 (57.66%), Query Frame = 3
Query: 330 FFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALFDSDLTPMEELQGVEVAHRILSFTTEYMELVKRYPAPMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHEASRTHTSLCHRYFFDPDTRTPLDGAMDTSDLRVSPKQWYRRHRKDE 1406
FF IG PK + APMV+QSE AFR L R HG L YT M H+ F+ + ++R + F+ DRPL+VQFCGN+P TV+ AARHVE CDAVDLNLGCPQ IA+KG YG++L+ + IV+ +S LS+PVTVKIR +TL+ L+ AG LL VHGRT KT +WDIIR++K+ + IPV+ANGGIE D +R LE TG D VMSSE +LENPALF S E +E+A + L F EY PA IK HLFK+L++ L H DLR L A ++ +R + D P+ + +TS WYRRHRK +
Sbjct: 46 FFRAIGSPKRVVAPMVDQSELAFRMLTRHHGAELCYTPMFHSRLFS--ESAEYRAKMFEKH--MNDRPLVVQFCGNDPQTVLAAARHVEAHCDAVDLNLGCPQGIARKGRYGSFLMKEKDVVRSIVSTLSENLSIPVTVKIRVFPDRQETLEFCDMLQSAGCDLLVVHGRTKEMNKTAVREVDWDIIREIKQRLTIPVLANGGIEVPEDVDRCLEATGCDGVMSSEAILENPALFGS-----ERPSFMEMAKQYLDFAREYP------PASEKIIKAHLFKILFQDLRVHTDLRTELAKSPNRDDMARIVAELDARLSS----------DAFPPVVYSAETS--------WYRRHRKGQ 371
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Match: K3WW65_GLOUD (tRNA-dihydrouridine synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW65_GLOUD) HSP 1 Score: 282 bits (721), Expect = 1.790e-86 Identity = 160/361 (44.32%), Postives = 213/361 (59.00%), Query Frame = 3
Query: 330 FFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGVDDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDKESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAANWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALF-DSDLTPMEELQGVEVAHRILSFTTEYMELVKRYP-APMISIKGHLFKMLYRLLECHHDLRARLGHYQCDAIEADVIVHEASRTHTSLCHRYFFDPDTRTPLDGAMDTSDLRVSPKQWYRRHRKDE 1406
FF IG PK I APMV+QSE AFR L R+HG L YT M H+ FA A +R + F+ +DRPLIVQFCGN+P TV+ AA+HVE CDAVDLNLGCPQ IA+KG YG++L+ + +IV +S LS+PVTVKIR E +TL+ L+ AG +L VHGRT KT NWDIIR++KE + IPV+ANGGIE D ER LE T AD VM+SE +LENPA+ +++ TP ++ +E+A +YME +++P A ++ HLFK+L++ L H DLR L + A D++ R + P + + + WYRRHRK +
Sbjct: 21 FFHAIGAPKRIVAPMVDQSELAFRMLTRKHGAELCYTPMFHSRLFAESPA--YREKMFE--QHIQDRPLIVQFCGNDPATVLAAAKHVEGHCDAVDLNLGCPQGIARKGRYGSFLMKEKDVVREIVQTLSDNLSIPVTVKIRMFPDEQETLEFCDMLQAAGCDMLVVHGRTKEMNKTLVREVNWDIIRQIKERLTIPVIANGGIEFPEDIERCLEATKADGVMTSEAILENPAILAETNNTPGKDTSFLELAK-------QYMEFAQQFPPANEKIVRAHLFKILFQDLRVHTDLRDLLAAVKTRAQMDDILKELEGRLRKE---------ELDAPAGEKQWSKVVYAAETSWYRRHRKGQ 361 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig75.15616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig75.15616.1 >prot_E-siliculosus-1a_M_contig75.15616.1 ID=prot_E-siliculosus-1a_M_contig75.15616.1|Name=mRNA_E-siliculosus-1a_M_contig75.15616.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=448bp MRSPACSHERRTVATGRLAGMAVLLPFMTRGWAFQTSCINARAMGGARLLback to top mRNA from alignment at E-siliculosus-1a_M_contig75:169532..174274- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig75.15616.1 ID=mRNA_E-siliculosus-1a_M_contig75.15616.1|Name=mRNA_E-siliculosus-1a_M_contig75.15616.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4743bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig75:169532..174274- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig75:169532..174274- >mRNA_E-siliculosus-1a_M_contig75.15616.1 ID=mRNA_E-siliculosus-1a_M_contig75.15616.1|Name=mRNA_E-siliculosus-1a_M_contig75.15616.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2688bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig75:169532..174274- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |