mRNA_E-siliculosus-1a_M_contig745.15589.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig745.15589.1
Unique NamemRNA_E-siliculosus-1a_M_contig745.15589.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A6G6D7D1_ECTSI (Cytochrome c biogenesis protein CcsA n=7 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7D1_ECTSI)

HSP 1 Score: 633 bits (1632), Expect = 1.510e-228
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 3
Query:   81 MSIVSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 1052
            MSIVSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV
Sbjct:    1 MSIVSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 324          
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A1I9LVC5_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVC5_9PHAE)

HSP 1 Score: 576 bits (1484), Expect = 5.370e-206
Identity = 283/324 (87.35%), Postives = 311/324 (95.99%), Query Frame = 3
Query:   81 MSIVSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 1052
            MS+VSEN++LV+NSVF+SCF+CT AYWSII M+DT+ILR IAK+TSRFAT+S+F+LL DRWIEFGYFPLSNLYESLLFL+CLLLFVYQVLEYKIQSP+FGGIILPIVLFITAF +F LPL MQKASALVPALQSNWLMMHVSLMMLSYSLL++GSSLAILYLV FLEFE+Y+RTMP+R A YEK ++R LGLK+R+E+L LGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGK+PAIIASLGFFVVW+CYLGVNFLGQGLHSYGWF+
Sbjct:    1 MSLVSENLNLVNNSVFVSCFLCTLAYWSIIYMKDTQILRTIAKLTSRFATVSIFILLTDRWIEFGYFPLSNLYESLLFLACLLLFVYQVLEYKIQSPIFGGIILPIVLFITAFTIFNLPLAMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVGFLEFENYIRTMPIREAEYEKVMQRILGLKNRKEHLRLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKMPAIIASLGFFVVWVCYLGVNFLGQGLHSYGWFI 324          
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A6B7IK16_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7IK16_9PHAE)

HSP 1 Score: 559 bits (1441), Expect = 1.900e-199
Identity = 276/324 (85.19%), Postives = 304/324 (93.83%), Query Frame = 3
Query:   81 MSIVSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 1052
            MSI+SE+I+L SNS+F+SCF  T AYW+I+SM+D+ ILR I KITSRFATLS+F+LL DRW+EFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQ+PVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLL+VGSSLAILYLV+FLEFE+Y+R MP+R  AYEKS+R++LGLK+REEYL LGL  IY +EQ  +L IRT FLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNG+ P++IASLGFFVVWICYLGVNFLGQGLHSYGWF+
Sbjct:    1 MSIISEHINLFSNSIFVSCFFSTLAYWTILSMKDSNILRTIGKITSRFATLSIFILLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQTPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIYIDEQATILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPSLIASLGFFVVWICYLGVNFLGQGLHSYGWFM 324          
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A8F0F9V5_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9V5_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 2.610e-163
Identity = 230/318 (72.33%), Postives = 273/318 (85.85%), Query Frame = 3
Query:   99 NISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 1052
            N S  +N +FISC V T  YW  +  ++ KI   +AK+TSRFA+L LFV L++RW+E GYFPLSNLYESLLFLSC+LLFVYQ+LEYK QS +FG II+PIVLFIT FA   LPLEMQKA+ALVPALQSNWLMMHVSLMMLSY++L++GS+ +I+Y+  FLE EDY++T+P+R A YEK IR+ L L +R ++L LGL +IY EE+DIV+N RT FLY+ID+WS+R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLIVGLNGK PA++AS+GFFVVWICYLGVNFLGQGLHSYGWF 
Sbjct:   12 NSSTFNNILFISCLVSTVFYWFSLGFKNIKIFGSLAKVTSRFASLILFVFLSNRWLESGYFPLSNLYESLLFLSCILLFVYQILEYKTQSSLFGCIIVPIVLFITGFAALTLPLEMQKANALVPALQSNWLMMHVSLMMLSYAILIMGSAFSIVYVGAFLELEDYIKTIPVRAAEYEKQIRKSLNL-TRSQFLYLGLDVIYNEEEDIVINNRTKFLYHIDNWSYRAISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGLNGKKPALLASIGFFVVWICYLGVNFLGQGLHSYGWFT 328          
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A516ICR2_9PHAE (Cytochrome c biogenesis protein CcsA n=27 Tax=Laminariales TaxID=2886 RepID=A0A516ICR2_9PHAE)

HSP 1 Score: 462 bits (1190), Expect = 3.520e-161
Identity = 230/321 (71.65%), Postives = 271/321 (84.42%), Query Frame = 3
Query:   90 VSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 1052
            V  + ++ +N +F  C V T  YW  +  ++ K+   +AKITSRFATLSLFV L +RWI+FGYFPLSNLYESLLFLSC+LLFV Q LE K QS +FG II+PIVLFIT FA   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++L++GSS AI+Y+  FLE EDY++T+P+R A YEK +R+ L L ++ ++L LGL +IY EE+DIV+N RT FLYNID+WS+R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLIVGLNGK PA++AS+GFFVVWICYLGVNFLGQGLHSYGWF 
Sbjct:    9 VCNDSNIFNNILFACCLVSTIFYWFSLGFKNIKVFSTLAKITSRFATLSLFVFLLNRWIQFGYFPLSNLYESLLFLSCILLFVSQALESKTQSLLFGCIIVPIVLFITGFAALTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILIIGSSFAIVYVGSFLELEDYIKTIPVRAAEYEKHMRKTLNL-TKSQFLYLGLDVIYNEEEDIVINNRTKFLYNIDNWSYRAISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGLNGKKPALLASIGFFVVWICYLGVNFLGQGLHSYGWFT 328          
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A2R4QPY5_9PHAE (Cytochrome c biogenesis protein CcsA n=4 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY5_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 1.150e-134
Identity = 209/342 (61.11%), Postives = 259/342 (75.73%), Query Frame = 3
Query:   87 IVSENI-SLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIR------RDLGLKSREEYLN-------------LGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 1052
            ++SEN  +L++NS+FI  F+ T+ YW  +S +   I   I KITSRFATLS+F+ L  RWI++GYFPLSNLYESLLFLS +LLF+YQ LE K QSP+FGGI+LP+VL I+ F+   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++L++GS+ +I+YLV  + F   + ++  R   Y++ +R      R + L +RE+Y               + L+ I+ E++ +  + RTNFL  +D WS R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLIVG+ GK PA +ASL FFVVWICYLGVNFLGQGLHSYGWF 
Sbjct:    1 MLSENYCNLLNNSLFILVFISTALYWFRLSFKSITIFNTIGKITSRFATLSIFLFLLIRWIDYGYFPLSNLYESLLFLSFILLFLYQFLESKAQSPIFGGIVLPLVLLISGFSELTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLIGSAFSIVYLVTSIVFLYNLESVEKRYFDYQEFMRGLINFTRGMNL-TREDYQTRSSIQSPSACCQIISLNNIFLEQEALAQSARTNFLSQLDKWSSRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGVTGKGPACLASLAFFVVWICYLGVNFLGQGLHSYGWFA 341          
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A1L2F1W2_9PHAE (Cytochrome c biogenesis protein CcsA n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1W2_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 2.520e-131
Identity = 204/339 (60.18%), Postives = 251/339 (74.04%), Query Frame = 3
Query:   93 SEN-ISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLK-----SREEYLN-------------LGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 1052
            SEN  +L++N +F   F+ T+ YW  +S +   I   I +ITSRFAT+++F+ L  RW+E+GYFPLSNLYESLLFLS +LLF YQ LE K +SP+FGGIILPIVL I+ FA   LPLEMQKA ALVPALQSNWLMMHVSLMMLSY++L++GS+ +I+YLV  L F   +R    R   Y++ +R  + L      +RE+Y               + L+ I+ E++    + RTNFL  +D WS R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLIVG+ GK PA +AS+ FFVVW+CYLGVNFLGQGLHSYGWF+
Sbjct:    3 SENYFNLLNNILFFLVFISTAIYWFRLSFKFVTIFNIIGEITSRFATINIFLFLLIRWVEYGYFPLSNLYESLLFLSFILLFSYQFLESKAKSPIFGGIILPIVLLISGFAELTLPLEMQKAGALVPALQSNWLMMHVSLMMLSYAILLIGSAFSIVYLVTLLVFSYTIRPFEKRYFDYQEFMRGLVNLAKGMTLTREDYKIRSSIQSAYACPEIISLNNIFLEQEAFAESARTNFLSQLDKWSSRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGVTGKGPAFLASIAFFVVWVCYLGVNFLGQGLHSYGWFM 341          
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A8F0FAP1_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP1_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 1.380e-126
Identity = 199/317 (62.78%), Postives = 244/317 (76.97%), Query Frame = 3
Query:  114 SNSVFISCFVCTSAYWSIISMRDTKI--LRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYK----EEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGW 1046
            SNS+FI   + T  YW   S+R TK+      AK+ SR AT+ LFV L  RWI+ GYFPLSNLYESLLFLSC++LFVYQ +EYK +S +FG I+LP+VLFIT FA   LPLEM+KASALVPALQSNWLMMHVSLMMLSY++L+VGS ++IL+L++FL              +YE+  R +  ++ R+ Y N+ L  + K    +++++  + +  FLYN+D+W +R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLI G  GK PAI+AS+GFFVVWICYLGVNFLGQGLHSYGW
Sbjct:   11 SNSIFIFLLISTVFYW--FSLRFTKVDFYYKFAKLNSRVATIILFVFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTSYGSYEEYARAE-NIEIRDLY-NVFLDPLDKMSASKQKELRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIKGWVGKGPAILASIGFFVVWICYLGVNFLGQGLHSYGW 323          
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A8F0F862_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F862_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 6.410e-126
Identity = 201/334 (60.18%), Postives = 251/334 (75.15%), Query Frame = 3
Query:   87 IVSEN-ISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEK---SIRRDLGLKSREE---YLNL------GLHLIYKEEQDIVLNI-RTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGW 1046
            +V++N  ++  NS+FI  F+ +  YW  + +   K+L  +AK T+R A LSLF+ LA RW  +GYFPLSNLYESLLFL+CLL  V+Q+LEY+ QS  FG IILPI+LFIT+FA   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++L++GS  +I++L+ FL        +P  +++  K   S + ++ LK  E+   YLN       G+ +    ++   LN+ +  FL  +D+WS+R+ISLGFP LTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLHVRLIVG +GK PAI+ASLGFFVVWICYLGVNFLGQGLH+YGW
Sbjct:    1 MVADNYFNIFKNSLFICLFISSIFYWVSLRITKFKMLYTVAKFTARIANLSLFIFLATRWGNYGYFPLSNLYESLLFLACLLSLVHQILEYQTQSKFFGTIILPIILFITSFADLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLLGSLFSIIFLITFLP-------LPKESSSITKDFFSTQSEIALKIEEDFQKYLNSNSVEAGGIQINESIQKYYDLNLLKIKFLITLDNWSYRTISLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHVRLIVGWSGKGPAILASLGFFVVWICYLGVNFLGQGLHTYGW 327          
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Match: A0A8E5XRE0_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRE0_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 1.370e-119
Identity = 190/318 (59.75%), Postives = 236/318 (74.21%), Query Frame = 3
Query:  105 SLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYK---EEQDIVLNIRTN-FLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGW 1046
            S  +NS+F+  F+ T  YW  +     K    IA+ TS  A + LF+ LA+RWI FGYFPLSNLYESLLFLSC+LL V++ LEY+ QS +FG  +LPI+L IT+FA   LPLEMQKA+ALVP+LQSNWLMMHVSLMMLSY++L++GS ++IL+L+V          +P++    EK    +   ++ E  +NL      K   E+  I+ N+  N  L N+D+WS+R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLHVRLI G +G+ PA++ S+GFFVVWICYLGVNFLGQGLHSYGW
Sbjct:    8 SFFTNSLFLCLFISTIFYWISLIFNKLKRSYSIARSTSLIANIILFLFLANRWIVFGYFPLSNLYESLLFLSCMLLLVHRFLEYRTQSKLFGATLLPIILLITSFADLTLPLEMQKANALVPSLQSNWLMMHVSLMMLSYAVLIIGSLISILFLIV---------CLPIKVNYEEKFT--NTNYEAGESIINLITQQPIKGELEQLKILYNMDYNSLLNNLDNWSYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHVRLIKGWDGEKPAMLGSIGFFVVWICYLGVNFLGQGLHSYGW 314          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig745.15589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6D7D1_ECTSI1.510e-228100.00Cytochrome c biogenesis protein CcsA n=7 Tax=Ectoc... [more]
A0A1I9LVC5_9PHAE5.370e-20687.35Cytochrome c biogenesis protein CcsA n=1 Tax=Pleur... [more]
A0A6B7IK16_9PHAE1.900e-19985.19Cytochrome c biogenesis protein CcsA n=1 Tax=Clado... [more]
A0A8F0F9V5_9PHAE2.610e-16372.33Cytochrome c biogenesis protein CcsA n=1 Tax=Chord... [more]
A0A516ICR2_9PHAE3.520e-16171.65Cytochrome c biogenesis protein CcsA n=27 Tax=Lami... [more]
A0A2R4QPY5_9PHAE1.150e-13461.11Cytochrome c biogenesis protein CcsA n=4 Tax=Fucac... [more]
A0A1L2F1W2_9PHAE2.520e-13160.18Cytochrome c biogenesis protein CcsA n=13 Tax=Sarg... [more]
A0A8F0FAP1_9PHAE1.380e-12662.78Cytochrome c biogenesis protein CcsA n=1 Tax=Desma... [more]
A0A8F0F862_9PHAE6.410e-12660.18Cytochrome c biogenesis protein CcsA n=1 Tax=Proto... [more]
A0A8E5XRE0_9PHAE1.370e-11959.75Cytochrome c biogenesis protein CcsA n=1 Tax=Ishig... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig745contigE-siliculosus-1a_M_contig745:6866..7920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size975
Model size1055
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EggNOG OGs2QU0T@2759,COG0755@1
EggNOG free text desc.cytochrome complex assembly
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0008150,GO:0008152,GO:0009536,GO:0015886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0055114,GO:0071702,GO:0071705,GO:1901678
Preferred nameccsA
Seed eggNOG ortholog2880.D1J757
Seed ortholog evalue1.1e-175
Seed ortholog score622.5
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936043.7258332-UTR-E-siliculosus-1a_M_contig745:6865..69451622936043.7258332-UTR-E-siliculosus-1a_M_contig745:6865..6945Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig745 6866..6945 +
1696250905.677082-UTR-E-siliculosus-1a_M_contig745:6865..69451696250905.677082-UTR-E-siliculosus-1a_M_contig745:6865..6945Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig745 6866..6945 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936043.7394297-CDS-E-siliculosus-1a_M_contig745:6945..79201622936043.7394297-CDS-E-siliculosus-1a_M_contig745:6945..7920Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig745 6946..7920 +
1696250905.6954787-CDS-E-siliculosus-1a_M_contig745:6945..79201696250905.6954787-CDS-E-siliculosus-1a_M_contig745:6945..7920Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig745 6946..7920 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig745.15589.1prot_E-siliculosus-1a_M_contig745.15589.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig745 6946..7920 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig745.15589.1

>prot_E-siliculosus-1a_M_contig745.15589.1 ID=prot_E-siliculosus-1a_M_contig745.15589.1|Name=mRNA_E-siliculosus-1a_M_contig745.15589.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=325bp
MSIVSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFAT
LSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFG
GIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSL
LMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLN
LGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVW
ANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGF
FVVWICYLGVNFLGQGLHSYGWFV*
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mRNA from alignment at E-siliculosus-1a_M_contig745:6866..7920+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig745.15589.1 ID=mRNA_E-siliculosus-1a_M_contig745.15589.1|Name=mRNA_E-siliculosus-1a_M_contig745.15589.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1055bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig745:6866..7920+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AACAACTAGTACTTTACGCTCCTTAAAATTAAGAAATAAAATATTAACCA TTCTCTATAAGATAAAAAAAGGATAAAAAAATGTCGATTGTAAGTGAAAA TATTAGTTTGGTAAGCAATAGTGTATTTATATCATGTTTTGTATGCACTT CAGCATATTGGAGTATTATATCGATGCGAGACACAAAAATTTTGCGAGAT ATTGCAAAAATTACTTCACGCTTTGCCACGTTAAGTCTTTTTGTACTCTT AGCAGACCGTTGGATTGAATTTGGTTACTTTCCTTTAAGTAACTTATATG AATCATTACTTTTTCTATCATGTTTACTATTATTTGTCTATCAAGTTTTA GAATATAAAATCCAAAGCCCCGTCTTTGGTGGAATTATTTTACCAATTGT TTTATTTATTACAGCTTTTGCAGTATTTAAATTACCTCTGGAAATGCAAA AAGCTAGTGCTTTAGTACCAGCCTTACAATCAAATTGGCTGATGATGCAT GTTAGTTTAATGATGTTAAGTTATTCTTTACTAATGGTGGGATCATCATT AGCAATTCTCTATTTAGTTGTTTTTTTAGAATTTGAAGATTATGTAAGAA CAATGCCGCTACGAACGGCTGCATATGAAAAATCTATCCGACGTGATCTA GGGCTAAAAAGTAGAGAGGAGTATTTGAATTTAGGATTACATTTAATTTA TAAAGAAGAACAGGATATTGTTTTAAATATCCGAACAAATTTTTTATATA ATATAGATAGTTGGAGTTTCCGTTCGATAAGTTTAGGATTCCCATTTTTA ACAATTGGTATCATAGCGGGAGCTGTTTGGGCAAATGAAGCTTGGGGAAG TTATTGGAGCTGGGATCCAAAAGAAACATGGGCTTTAATTACTTGGTTAA ACTTTGCTGCATATTTACATGTAAGATTAATAGTAGGATTGAATGGTAAA ATTCCAGCGATTATAGCAAGTCTTGGGTTTTTTGTTGTTTGGATTTGTTA TCTTGGAGTGAATTTTTTAGGACAAGGTTTGCATAGTTATGGTTGGTTTG TGTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig745:6866..7920+

>mRNA_E-siliculosus-1a_M_contig745.15589.1 ID=mRNA_E-siliculosus-1a_M_contig745.15589.1|Name=mRNA_E-siliculosus-1a_M_contig745.15589.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1950bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig745:6866..7920+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCGATTGTAAGTGAAAATATTAGTTTGGTAAGCAATAGTGTATTTAT
ATCATGTTTTGTATGCACTTCAGCATATTGGAGTATTATATCGATGCGAG
ACACAAAAATTTTGCGAGATATTGCAAAAATTACTTCACGCTTTGCCACG
TTAAGTCTTTTTGTACTCTTAGCAGACCGTTGGATTGAATTTGGTTACTT
TCCTTTAAGTAACTTATATGAATCATTACTTTTTCTATCATGTTTACTAT
TATTTGTCTATCAAGTTTTAGAATATAAAATCCAAAGCCCCGTCTTTGGT
GGAATTATTTTACCAATTGTTTTATTTATTACAGCTTTTGCAGTATTTAA
ATTACCTCTGGAAATGCAAAAAGCTAGTGCTTTAGTACCAGCCTTACAAT
CAAATTGGCTGATGATGCATGTTAGTTTAATGATGTTAAGTTATTCTTTA
CTAATGGTGGGATCATCATTAGCAATTCTCTATTTAGTTGTTTTTTTAGA
ATTTGAAGATTATGTAAGAACAATGCCGCTACGAACGGCTGCATATGAAA
AATCTATCCGACGTGATCTAGGGCTAAAAAGTAGAGAGGAGTATTTGAAT
TTAGGATTACATTTAATTTATAAAGAAGAACAGGATATTGTTTTAAATAT
CCGAACAAATTTTTTATATAATATAGATAGTTGGAGTTTCCGTTCGATAA
GTTTAGGATTCCCATTTTTAACAATTGGTATCATAGCGGGAGCTGTTTGG
GCAAATGAAGCTTGGGGAAGTTATTGGAGCTGGGATCCAAAAGAAACATG
GGCTTTAATTACTTGGTTAAACTTTGCTGCATATTTACATGTAAGATTAA
TAGTAGGATTGAATGGTAAAATTCCAGCGATTATAGCAAGTCTTGGGTTT
TTTGTTGTTTGGATTTGTTATCTTGGAGTGAATTTTTTAGGACAAGGTTT
GCATAGTTATGGTTGGTTTGTGTAAATGTCGATTGTAAGTGAAAATATTA
GTTTGGTAAGCAATAGTGTATTTATATCATGTTTTGTATGCACTTCAGCA
TATTGGAGTATTATATCGATGCGAGACACAAAAATTTTGCGAGATATTGC
AAAAATTACTTCACGCTTTGCCACGTTAAGTCTTTTTGTACTCTTAGCAG
ACCGTTGGATTGAATTTGGTTACTTTCCTTTAAGTAACTTATATGAATCA
TTACTTTTTCTATCATGTTTACTATTATTTGTCTATCAAGTTTTAGAATA
TAAAATCCAAAGCCCCGTCTTTGGTGGAATTATTTTACCAATTGTTTTAT
TTATTACAGCTTTTGCAGTATTTAAATTACCTCTGGAAATGCAAAAAGCT
AGTGCTTTAGTACCAGCCTTACAATCAAATTGGCTGATGATGCATGTTAG
TTTAATGATGTTAAGTTATTCTTTACTAATGGTGGGATCATCATTAGCAA
TTCTCTATTTAGTTGTTTTTTTAGAATTTGAAGATTATGTAAGAACAATG
CCGCTACGAACGGCTGCATATGAAAAATCTATCCGACGTGATCTAGGGCT
AAAAAGTAGAGAGGAGTATTTGAATTTAGGATTACATTTAATTTATAAAG
AAGAACAGGATATTGTTTTAAATATCCGAACAAATTTTTTATATAATATA
GATAGTTGGAGTTTCCGTTCGATAAGTTTAGGATTCCCATTTTTAACAAT
TGGTATCATAGCGGGAGCTGTTTGGGCAAATGAAGCTTGGGGAAGTTATT
GGAGCTGGGATCCAAAAGAAACATGGGCTTTAATTACTTGGTTAAACTTT
GCTGCATATTTACATGTAAGATTAATAGTAGGATTGAATGGTAAAATTCC
AGCGATTATAGCAAGTCTTGGGTTTTTTGTTGTTTGGATTTGTTATCTTG
GAGTGAATTTTTTAGGACAAGGTTTGCATAGTTATGGTTGGTTTGTGTAA
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