mRNA_E-siliculosus-1a_M_contig74.15561.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig74.15561.1 vs. uniprot
Match: A0A6H5JTZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ9_9PHAE) HSP 1 Score: 2358 bits (6110), Expect = 0.000e+0 Identity = 1504/1923 (78.21%), Postives = 1548/1923 (80.50%), Query Frame = 1
Query: 4 EEPRVIVASPTTSDAVGAGSTSDAGYFTPPPSVGQGTTKKQSAATRGSPSYADHDGSSGDDGSSGSGIRKRRSRRGPTLAPALDSRADRDRSQSAEAGETLEEAGSKRGGGRWKWTSTAASRAPGKFSRANGGGGCDGEANPSPLSKHRKQPAVVAEPETLTQDNGESNTRNPDGLNSTGSGEGRTTGVDATLGGSAXXXXXXXXXXXXAKMTPRRWKMLATRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GRTDRATAPKEQESRQSFVQPAAVATTTAGRGARPSSVKQTAAXXXXXXXXXXXXRTGVHVGYQKMRISXXXXXXXXXXXXXXXXXXTLSRPPPAPGTTTPRYRGTVPNPAVGGTCESSKRGGYGPRSPMPPPSPGGSSDGAAAPPLSEEGGVTPRQPQATATTPSGNGANGDDGVVDVHLAEGELKAGGWKHLDSAGGGSFEIDSRHSSSGSTTPNIATEKTVIKAGGEKPEEQSGRTRGGFDSGFEATAVAGKSDGGMTEREIIAAAEAAVAAAKNAAAGTVDRATAPGTPPEFPVDTAELLSDAAATTPGTKGKADTRRVGRTGKVQLEGTAAVMGGTRRQCVEKENPAVTGEDGGSVSRTVRDDNWWRQSAAKALAISAEMKKTPGRSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXSATTRRGGVTPRDGRGTPSSRGGSVVGRAKGRNGGGGGSRSREDAGGWSTEDGAEGGVVGVAGAEGTASISAQGVMIPMDGIASTEVSPTFSTISSREQAERDRERLAAMNGGGDGGYRRSSWGVALPLSGTDDTPREHGGAHGARESGAGRRSRESSGWGLTSDDGGDWEQQRRWRSSRXXXXXXVWSDDGVHDYDHGDTGGSSASTSMYSDEEEDGGLSSSRSSISTGYESSAMWKGSEPRQPGTPAGEGQN---GDAGGHDRGSGKYAPPSPAWPLQRPAVGQTPDAALSGLEVSAVKKKAYYEIQAAAEAVESSTPSTGSDASSRQTKNLPSARTGRMPSETRALLSSRGGSLPEFFPFDAPPGSRGSRAGGG----KGGHFCRAEASGPASGA--VKSTPSMPPRIQTSVSEGTILQYKAGGYGSKPQHASVEEAVAMVFAWSLLSRDGGCTTTAQSQQGRPAGATPDMRHGGRGWRRGDSQYFFSSRGSSALGMSPAGMIEHHYERHRNPSPGEMRRHDSNASGSRRSXXXXXXXXXXXXXGRDRSXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPSGQQNRAPPAIPPLPKVLFRPPTAATATXXXXXXXXXXXXXXXXXERQGSAPTKIAFVVAPGGEADGHVGNGGRVSRGKSWSFAGTPTSTVFSPSSAVANPFISTRYSQHSAYSFYSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLSCSDGGVGKISRPLPRTTSVADKTDGEGGRRLDAEDGAQGRVTASAAQGARKQGHAGTDRRTARVTVTARATGGLASDVGGSRRSAGSGRRAIYRTMSLRGRSIFCVGGGNAGTAERRAVSMSSFRSRGESLREDGEYYRSYSWRGGGRGVANRVCSVLSARWLFSRNWNKKDREEKKRKGRTRGGDSSSNVSRPSTYTSGGVVGVVDRGEFSSNEDGSXXXXXXXXXXXVVDVTGSMDVPNDGAPGRAGKTRALGGSGGGPRDEGTSRPAAGEGGSATAGGGSVGPGTTAASGRKRISFPRSAFLGFSRSAQRSMSSYSFVQHGPASWAGGVGGGDGDGVGGVRASQSTTAAEAGPGLAVDAGRGTLPATSVDFAGGGDGTANGSPKANRAAPRDNGGDGDVQYVNFNGHGGRAGGVVALRRGDGVAAVEIEGDRSVSTTGYSSSLKPLQAEQDEEEAKRKMDALLLRSRVHTHGNPVVPAA 5742
EEPRV+VASPTTSDAVGAGSTSDAGYFTPPPSVGQGTT+K+SAAT GS SYADHDGSSGDDGS GSG RKRRSRR PTLA ALDSRAD D SQSAE GET E GSKRGGGRWKWTSTAA APGKFSRA GGGGCDGEANPSPLSKH +QPA VAEPETLTQD+G+SN R PDG NSTGSGEG TT +D+TLGG AKMTPR WK+LATRT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GRTDRA A KEQESR+ FVQP A ATTTAGRGARPSSVKQTA XXXXXXX RTGVHVGYQKMRIS LSRPPPAPGTTTPRYRGT+PN AVGGTCE SKR G+GPRSPMPPPSPGGSSDGA APPLSEEGGVTPRQ QATATTPSGNGANGD+GVVDVHLAEGELKA G KHLDSAG GS EID+RHSSS ST +IATEK V +AG EKPEEQSGRT GFDSGFEATAVA KSDGGM EREIIAAAEAAV +AK AAAGT DR TAPG PPEFPVDTAELLSDAAATTPGTK KADTR V RTGKVQLEGT V GGTRRQCVEKEN V+GEDGGSVSRTVRD+NWWRQ+AAKALAISAEMKKTPGRSRSRNGXXXXXXXXXXXXXXX ATTRRGGVTPR SSR GSV+GRAKG N GGGGSRSREDAG W TEDGAE GV GV GA+G ASISAQGV+IPMD IASTEVSPTFSTISSREQAERDRERLAAMNG GDGGYRRSSWGVALPLSGTDDTPREH GAHG RESG GRRSRESSGWGLTSDD GDWEQQRRWRSS VWSDDGVHD DH +GGSSA TSMYSDEEEDG LSSSR SISTGYESSA KGS+PRQPGTP GE Q+ GDAGG DR S YAPPSPAWPLQ P VGQTPDA LS LE+SAV KKAYYEIQAAAE VESSTPSTGSD SSRQ KNLP A GRMPSETRALLS L + P SRG R G R GP +G+ VKSTPSMPPRIQTSVSEGTILQ KAGGYGSKPQHASVEEAVAMVFAWSLLSRDGG TTTAQSQQ RPAGATPDMRHGGRGWRRGDSQYFFSSRGSSALGMSPAGMIEHHYERHRNPSP EM RH SNASGSRRS RDRS D XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX ERQGSA IAFVVAPGG+ DGHVGNGGRVSRGKSWSFAGTPTSTVFSP+SAVANPFISTRY+QHSAYSFYSNS GGLSCSDGGVGKI+ PLPRTTSV DKTD EGGRRLDA+DGAQGRV ASA+QGARKQG A DRR ARVT TARAT GLASD+GGSRRS GSGRR IYRTMSLRGRSIF V GGNAGTAERRAVSMSSFR RGESLREDGEYYRSYSWRGGGRGVANRVCSVLSARWLFSRNWNKKDREEK RK ++RGGDSSSNVSRPSTYTSGGV+GVVD GE S+EDG XXXXXXXXX VVDVT MD+P GA GRAGKTR LGGSGGGPR EGTSRPAAGEGGSATAGG SVGPGTTAASGRKRISFP S FLGFSRSAQRSMSSYSFVQH PAS AGGVG GGVRASQSTTAAE PGLAVDAGRGTL ATSVDFAGGGDG ANGSPK NRAAPR NGGDGDVQYVNFNGH GRAGGVVALRRGDGVAAVEIEGDRSV++TGYSSSLKPLQAEQD EEAKRKMDALLLRSRVHTH NPVVPAA
Sbjct: 2 EEPRVMVASPTTSDAVGAGSTSDAGYFTPPPSVGQGTTRKKSAATSGSRSYADHDGSSGDDGSVGSGFRKRRSRRRPTLASALDSRADGDCSQSAEVGETPVEVGSKRGGGRWKWTSTAALPAPGKFSRAKGGGGCDGEANPSPLSKHMQQPAAVAEPETLTQDSGKSNRRKPDGPNSTGSGEGSTTVLDSTLGGPVATTTAVASLTTSAKMTPRSWKILATRTSTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRTDRAIAQKEQESRRPFVQPVAAATTTAGRGARPSSVKQTAVEAAXXXXXXXG-RTGVHVGYQKMRISSGGGNSATTCAAEADADEALSRPPPAPGTTTPRYRGTIPNSAVGGTCERSKRDGHGPRSPMPPPSPGGSSDGATAPPLSEEGGVTPRQSQATATTPSGNGANGDNGVVDVHLAEGELKARGCKHLDSAGWGSSEIDTRHSSSSSTL-SIATEKIVTRAGEEKPEEQSGRTSDGFDSGFEATAVAVKSDGGMAEREIIAAAEAAVTSAKKAAAGTGDRVTAPGIPPEFPVDTAELLSDAAATTPGTKDKADTRGVDRTGKVQLEGTVVVTGGTRRQCVEKENLRVSGEDGGSVSRTVRDNNWWRQNAAKALAISAEMKKTPGRSRSRNGXXXXXXXXXXXXXXXR----------GATTRRGGVTPRXXXXXXSSRSGSVIGRAKGWNSGGGGSRSREDAGAWYTEDGAESGVAGV-GADGPASISAQGVVIPMDDIASTEVSPTFSTISSREQAERDRERLAAMNGRGDGGYRRSSWGVALPLSGTDDTPREHRGAHGVRESGTGRRSRESSGWGLTSDDDGDWEQQRRWRSSLASSASGVWSDDGVHDDDHDGSGGSSACTSMYSDEEEDGDLSSSRFSISTGYESSARGKGSQPRQPGTPTGEDQSQHDGDAGGRDRASDTYAPPSPAWPLQHPPVGQTPDAVLSELEISAVTKKAYYEIQAAAEEVESSTPSTGSDVSSRQAKNLPRATMGRMPSETRALLSRFVLLLRLCCNYSLP--SRGGRKSVAPTVLNGALLPR----GPNTGSFQVKSTPSMPPRIQTSVSEGTILQSKAGGYGSKPQHASVEEAVAMVFAWSLLSRDGGRTTTAQSQQARPAGATPDMRHGGRGWRRGDSQYFFSSRGSSALGMSPAGMIEHHYERHRNPSPAEMHRHGSNASGSRRSGRSRTATRQEHKQRRDRSATSSGRRSGSALDRRVRQALSTPPTPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXPQERQGSATRDIAFVVAPGGKEDGHVGNGGRVSRGKSWSFAGTPTSTVFSPTSAVANPFISTRYTQHSAYSFYSNSNSPTSTRSVDNREETKTAETKATLASTSGGGDGGGLSCSDGGVGKITYPLPRTTSVTDKTDDEGGRRLDADDGAQGRVIASASQGARKQGRADIDRRAARVTATARATEGLASDMGGSRRSIGSGRRPIYRTMSLRGRSIFSVSGGNAGTAERRAVSMSSFRRRGESLREDGEYYRSYSWRGGGRGVANRVCSVLSARWLFSRNWNKKDREEK-RKDQSRGGDSSSNVSRPSTYTSGGVIGVVDGGELPSSEDGXXXXXXXXXX--VVDVTSLMDIPMGGAEGRAGKTRTLGGSGGGPRGEGTSRPAAGEGGSATAGGVSVGPGTTAASGRKRISFPLSTFLGFSRSAQRSMSSYSFVQHDPASRAGGVGXXXXXXXGGVRASQSTTAAEEDPGLAVDAGRGTLMATSVDFAGGGDGKANGSPKTNRAAPRGNGGDGDVQYVNFNGHCGRAGGVVALRRGDGVAAVEIEGDRSVASTGYSSSLKPLQAEQDGEEAKRKMDALLLRSRVHTHVNPVVPAA 1901
BLAST of mRNA_E-siliculosus-1a_M_contig74.15561.1 vs. uniprot
Match: D7G390_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G390_ECTSI) HSP 1 Score: 1222 bits (3162), Expect = 0.000e+0 Identity = 767/971 (78.99%), Postives = 791/971 (81.46%), Query Frame = 1
Query: 4 EEPRVIVASPTTSDAVGAGSTSDAGYFTPPPSVGQGTTKKQSAATRGSPSYADHDGSSGDDGSSGSGIRKRRSRRGPTLAPALDSRADRDRSQSAEAGETLEEAGSKRGGGRWKWTSTAASRAPGKFSRANGGGGCDGEANPSPLSKHRKQPAVVAEPETLTQDNGESNTRNPDGLNSTGSGEGRTTGVDATLGGSAXXXXXXXXXXXXAKMTPRRWKMLATRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTDRATAPKEQESRQSFVQPAAVATTTAGRGARPSSVKQTAAXXXXXXXXXXXXRTGVHVGYQKMRISXXXXXXXXXXXXXXXXXXTLSRPPPAPGTTTPRYRGTVPNPAVGGTCESSKRGGYGPRSPMPPPSPGGSSDGAAAPPLSEEGGVTPRQPQATATTPSGNGANGDDGVVDVHLAEGELKAGGWKHLDSAGGGSFEIDSRHSSSGSTT---PNIATEKTVIKAGGEKPEEQSGRTRGGFDSGFEATAVAGKSDGGMTEREIIAAAEAAVAAAKNAAAGTVDRATAPGTPPEFPVDTAELLSDAAATTPGTKGKADTRRVGRTGKVQLEGTAAVMGG-TRRQCVEKENPAVTGEDGGSVSRTVRDDNWWRQSAAKALAISAEMKKTPGRSRSRNGXXXXXXXXXXXXXXXXXXXXXXXXXXSATTRRGGVTPRDGRGTPSSRGGSVVGRAKGRNGGGGGSRSREDAGGWSTEDGAEGGVVGVAGAEGTASISAQGVMIPMDGIASTEVSPTFSTISSREQAERDRERLAAMNGGGDGGYRRSSWGVALPLSGTDDTPREHGGAHGARESGAGRRSRESSGWGLTSDDGGDWEQQRRWRSSRXXXXXXVWSDDGVHDYDHGDTGGSSASTSMYSDEEEDGGLSSSRSSISTGYESSAMWKGSEPRQPGTPAGEGQNGDAGGHDRGSGKYAPPSPAWPLQRPAVGQTP 2904
EEPRVIVAS TTSDAVGAGSTSDAGYFTPPPSVGQGTT+K+S A+RGSPSYADHDGSS DDGS GS IR RRSRRGPTLAPALDSRADRDRSQSAEAGET EEAG+KRGGGRWKWTSTAASRAPGKFSRANGGGGCDGEA PSPLSKH +QPA VAEPETLTQD+G+SN R PDG NSTGSGEG T +D+ LGG A K+TP WKMLATRT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GRT RATAPKEQESRQSFVQP A ATTTAGRGARPSSVKQTAAXXXXXXXXX RTGVHVGYQKMRIS XXX LSRPPPAPGT+TPRYRGTVPNPAVGGTCE SKRG YGPRSPMPPPSPGGSSDG AAPPLSEEGGVTPRQPQATATTPSGNGANG +GVVDVHLAEGEL+AGGWKHLDSAGGGSFEIDSRHS PNIATEK V +AG EKPEEQSGRTR GFDSGFEATAVA KSDGGMTEREIIA AE AVA+AK AAGTVDRATAPGTPP+FPVDTAELLSDAAAT PGTKGKA TR V RTGKVQLEGT AV GG TR QCVEKE+ V+GEDGGSVSRTVRDDNWW+Q+AAKALAISAE K TPGRSRS XXXXXXXXXXXXXXXX SA+TRRGGV PRDGRGTPSSR GSVVGRAKG+NGGGGGSRSREDAGGW TEDGAEGGV GV GGGDGGYRRSSWGVALPLSGTDDTPREHGGAHGARESG GRRSRESSGWGL SDDGGDWEQQRRWRSSR VWSDDGVHDYDH DTG S+ASTSMYSDEEED L SSRSSISTGYESSAM KGSEPRQPGTPAGE Q+ D GGHDRGSGKYAPPSPAWPLQ P VGQTP
Sbjct: 2 EEPRVIVASLTTSDAVGAGSTSDAGYFTPPPSVGQGTTRKKSPASRGSPSYADHDGSSSDDGSGGSSIRTRRSRRGPTLAPALDSRADRDRSQSAEAGETPEEAGTKRGGGRWKWTSTAASRAPGKFSRANGGGGCDGEAIPSPLSKHMQQPAAVAEPETLTQDSGKSNRRTPDGPNSTGSGEGSTAALDSILGGPAARTTAVASSTSPTKVTPWSWKMLATRTSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGRTGRATAPKEQESRQSFVQPPAAATTTAGRGARPSSVKQTAAXXXXXXXXXAG-RTGVHVGYQKMRISSGGGNRAIACAAEXXXDEALSRPPPAPGTSTPRYRGTVPNPAVGGTCERSKRGEYGPRSPMPPPSPGGSSDGVAAPPLSEEGGVTPRQPQATATTPSGNGANGANGVVDVHLAEGELEAGGWKHLDSAGGGSFEIDSRHSXXXXXXXXXPNIATEKNVTRAGEEKPEEQSGRTRDGFDSGFEATAVARKSDGGMTEREIIAGAEVAVASAKKEAAGTVDRATAPGTPPKFPVDTAELLSDAAATAPGTKGKAGTRGVDRTGKVQLEGTVAVTGGGTRCQCVEKESLRVSGEDGGSVSRTVRDDNWWKQNAAKALAISAERKNTPGRSRSXXXXXXXXXXXXXXXXXXX----------SASTRRGGVAPRDGRGTPSSRSGSVVGRAKGQNGGGGGSRSREDAGGWPTEDGAEGGVAGV--------------------------------------------------GGGDGGYRRSSWGVALPLSGTDDTPREHGGAHGARESGTGRRSRESSGWGLNSDDGGDWEQQRRWRSSRASSASGVWSDDGVHDYDHDDTGRSNASTSMYSDEEEDDDLPSSRSSISTGYESSAMGKGSEPRQPGTPAGEDQDDDVGGHDRGSGKYAPPSPAWPLQHPPVGQTP 911
BLAST of mRNA_E-siliculosus-1a_M_contig74.15561.1 vs. uniprot
Match: D7G391_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G391_ECTSI) HSP 1 Score: 377 bits (969), Expect = 2.620e-116 Identity = 217/234 (92.74%), Postives = 219/234 (93.59%), Query Frame = 1
Query: 5005 MDVPNDGAPGRAGKTRALGGSGGGPRDEGTSRPAAGEGGSATAGGGSVGPGTTAASGRKRISFPRSAFLGFSRSAQRSMSSYSFVQHGPASWAGGVGGGDGDGVGGVRASQSTTAAEAGPGLAVDAGRGTLPATSVDFAGGGDGTANGSPKANRAAPRDNGGDGDVQYVNFNGHGGRAGGVVALRRGDGVAAVEIEGDRSVSTTGYSSSLKPLQAEQDEEEAKRKMDALLLRSR 5706
MD+ GAPGRA KTRALGGSGGGPRDEGTSRPAAGEGGSATAG GSVGPGTTAASGRKRISFPRSAFLGFSRSAQRSMSSYSFVQH PAS AGGVGGGDGDG GGVRASQST AAEAGPGLAVDAGRGTLPATSVDFAGGG+ ANGSPK NRAAPRDNGGDGDVQYVNFNGHGGRAGGVVALRRGDGVAAVEIEGDRSVSTTGYSS LKPLQAEQDEEEAKRKMDALLL R
Sbjct: 1 MDILVGGAPGRAEKTRALGGSGGGPRDEGTSRPAAGEGGSATAGSGSVGPGTTAASGRKRISFPRSAFLGFSRSAQRSMSSYSFVQHDPASRAGGVGGGDGDGAGGVRASQSTPAAEAGPGLAVDAGRGTLPATSVDFAGGGEEKANGSPKDNRAAPRDNGGDGDVQYVNFNGHGGRAGGVVALRRGDGVAAVEIEGDRSVSTTGYSSFLKPLQAEQDEEEAKRKMDALLLSGR 234 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig74.15561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig74.15561.1 >prot_E-siliculosus-1a_M_contig74.15561.1 ID=prot_E-siliculosus-1a_M_contig74.15561.1|Name=mRNA_E-siliculosus-1a_M_contig74.15561.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1936bp QEEPRVIVASPTTSDAVGAGSTSDAGYFTPPPSVGQGTTKKQSAATRGSPback to top mRNA from alignment at E-siliculosus-1a_M_contig74:604620..619120- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig74.15561.1 ID=mRNA_E-siliculosus-1a_M_contig74.15561.1|Name=mRNA_E-siliculosus-1a_M_contig74.15561.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=14501bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig74:604620..619120- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig74:604620..619120- >mRNA_E-siliculosus-1a_M_contig74.15561.1 ID=mRNA_E-siliculosus-1a_M_contig74.15561.1|Name=mRNA_E-siliculosus-1a_M_contig74.15561.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=11616bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig74:604620..619120- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |