mRNA_E-siliculosus-1a_M_contig74.15543.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig74.15543.1 vs. uniprot
Match: D7FLS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS2_ECTSI) HSP 1 Score: 731 bits (1886), Expect = 3.290e-252 Identity = 604/688 (87.79%), Postives = 606/688 (88.08%), Query Frame = 1
Query: 1 PYGKSRHDSDPLSFAPQDPYEHQQQQQQANKRARMDYGGVAASGGLRVGGSMGPAAGVPYDDXXXXXXXXXXXXXXXLGYQAPLETYGEGSRGVSGRGRGXXXXXXXXSTAXXXXVLGGTSYYGXXXDGLEEVXXXXXXXXXXXXGTSGVGTAAALYGNTXXXXXXXXXXXXXXGRYTGYPEASGGTSYGSGVPGTAAXXXXXXXXXTGGYGTSEGIGDRYGGGGGMREVVPADGYEDVRSGMVGGGYRTTNYSSGTGGGFAMAGSDGAGYSGGRRGGGSALPYDEYRSEFYPSGGLGTGGXXXXXGRVWPGSSAAGRXXXXXXXXXXXXXXXXXXXXXXXXXRDPGRIRGDDAADMHATGDIASTIGSVASMLADGXXXXXXXXXXXXXPKATPGVVDKHAVEEDDGIEDEGPLGGWTEVESWEFARLPLEGKTRKPCPREVSGPIHVFDGKRKPGATGWPPGITWMVSETYKGTLEGINXXXXXXXXXXXXXXXXXXXXXXXXXXLELYLRGPFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDKDKGYERAKFNQPLAGMAWPASLKQLSAGHAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKVYAWSFSSRAAVQPTPTFGKTNVGLSNFSGHNSEQVMFEY 2064
PYG SR DSDPLSF PQDPYEHQQQQQ ANKRARMDYGGVAASGGLRVGGSMGPAAGVPYDD L YQAP ETYGEGSRGVSGRGRGXXXXXXXX XXX + GTSYYG DGLEEV GTSGVGT AALYGNT GRYTGYPEAS GTS XXXXXXXXXT GYGTS GIGDRYGGGGGMREVVPADGYEDVRSGMVGGGYRTTNYSSGTGGG AMAGSDGAGY GGRRGGGSALPYDEYRSEFYPSGGLGT XXXXXG VWPGSSAAGRXXXXXXXXXXXXXXXXXXXXXXXXX DPGRIRGDDAA MHATGDIASTIGSVASMLADGXXXXXXXXXXXXXPKATPGVVDKHAVEEDDGIEDEGPLGGWTEVESWEFARLPLEGKTRKPCPREVSGPIHVFDGKRKPGATGWPPGITWMVSETYKGTLEGINXXXXXXXXXXXXXXXXXXXXXXXXXXLELYLRGPFD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDKDKGYERAKFNQPLAGMAWPASLKQLSAG AFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKVYAWSFSSRAAV+PTPTFGKTNVGLSNFSGHNSEQVMFEY
Sbjct: 3 PYGTSRQDSDPLSFPPQDPYEHQQQQQ-ANKRARMDYGGVAASGGLRVGGSMGPAAGVPYDDYGGIASDGGGGGV--LSYQAPFETYGEGSRGVSGRGRGXXXXXXXXXXXXXXVL--GTSYYGGAGDGLEEVRGGIVGGAAAFHGTSGVGTTAALYGNTGNTGGVGV------GRYTGYPEASRGTSXXXXXXXXXXXXXXXXXXXTRGYGTSGGIGDRYGGGGGMREVVPADGYEDVRSGMVGGGYRTTNYSSGTGGGLAMAGSDGAGYGGGRRGGGSALPYDEYRSEFYPSGGLGTXXXXXXXGHVWPGSSAAGRXXXXXXXXXXXXXXXXXXXXXXXXXXDPGRIRGDDAAGMHATGDIASTIGSVASMLADGXXXXXXXXXXXXXPKATPGVVDKHAVEEDDGIEDEGPLGGWTEVESWEFARLPLEGKTRKPCPREVSGPIHVFDGKRKPGATGWPPGITWMVSETYKGTLEGINXXXXXXXXXXXXXXXXXXXXXXXXXXLELYLRGPFDQAIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDKDKGYERAKFNQPLAGMAWPASLKQLSAGQAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKVYAWSFSSRAAVEPTPTFGKTNVGLSNFSGHNSEQVMFEY 679 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig74.15543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig74.15543.1 >prot_E-siliculosus-1a_M_contig74.15543.1 ID=prot_E-siliculosus-1a_M_contig74.15543.1|Name=mRNA_E-siliculosus-1a_M_contig74.15543.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=655bp MDYGGVAASGGLRVGGSMGPAAGVPYDDYGGIALDGGGGGGGVLGYQAPLback to top mRNA from alignment at E-siliculosus-1a_M_contig74:275803..283703+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig74.15543.1 ID=mRNA_E-siliculosus-1a_M_contig74.15543.1|Name=mRNA_E-siliculosus-1a_M_contig74.15543.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7901bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig74:275803..283703+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig74:275803..283703+ >mRNA_E-siliculosus-1a_M_contig74.15543.1 ID=mRNA_E-siliculosus-1a_M_contig74.15543.1|Name=mRNA_E-siliculosus-1a_M_contig74.15543.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3930bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig74:275803..283703+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |