mRNA_E-siliculosus-1a_M_contig72.15415.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig72.15415.1
Unique NamemRNA_E-siliculosus-1a_M_contig72.15415.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: D8LRG5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRG5_ECTSI)

HSP 1 Score: 422 bits (1084), Expect = 1.700e-146
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 3
Query:   18 MTIVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCRS 674
            MTIVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQ+QMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCRS
Sbjct:    1 MTIVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQRQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCRS 219          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: A0A835YGH9_9STRA (Longin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGH9_9STRA)

HSP 1 Score: 271 bits (693), Expect = 4.900e-87
Identity = 137/218 (62.84%), Postives = 170/218 (77.98%), Query Frame = 3
Query:   24 IVYALIARGKAVLAEFTATAGNFPTVTRVLLNKI-PTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCRS 674
            IVY+L+ARGK VLAE+T +AGNFP +TR+LL K+  TE  +MSYV+D HVFHYIVE+G+ YLC+ADEQSRRR+PFAFLEDI+ KF AQYGA  HTA AF+MN EFAP+LQ+Q D +N +P  D LQ VR Q++  +  M+ N++KVLERGEKIELLVDKTD+LNQQAF FDRASR L+R +YWRKV+      G+   L+    A+ACGG +F  CRS
Sbjct:    2 IVYSLVARGKCVLAEYTQSAGNFPNITRILLGKVNTTEDGKMSYVYDKHVFHYIVEDGLIYLCLADEQSRRRIPFAFLEDIRRKFRAQYGARPHTALAFAMNEEFAPVLQRQQDYYNVDPSSDQLQSVRDQVDATKDIMVANIEKVLERGEKIELLVDKTDRLNQQAFNFDRASRQLQRALYWRKVRMYALLGGLIAALLLTLAASACGGYSFKACRS 219          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: A0A7S2BSP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSP6_9STRA)

HSP 1 Score: 254 bits (650), Expect = 1.100e-80
Identity = 123/216 (56.94%), Postives = 167/216 (77.31%), Query Frame = 3
Query:   24 IVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCR 671
            IVYAL ARGK+VL E+T+T+GNFP VTRVLL+KIP +  +MSYV+D +VFHY+VE G+TYLCM +E+  RRVPFAFLEDI+ +F  Q+G  +HTA  FS+N EF P+LQ+QM+ +NS+P  DS+  V++Q++DV+  M+EN++KVLERGEKIELLVDKTD+LNQ AF+F++ S+ L+  ++W+KV+T        +IL      +ACGG TF  CR
Sbjct:    2 IVYALCARGKSVLVEYTSTSGNFPVVTRVLLSKIPPQDGKMSYVYDRYVFHYVVECGITYLCMTNEKQTRRVPFAFLEDIRRRFKTQFGEGVHTAIPFSLNEEFVPVLQRQMEYYNSDPSADSISKVKTQLDDVKHVMVENIEKVLERGEKIELLVDKTDRLNQTAFKFEKTSKQLKTALFWQKVRTYALGVLAVLILALVVTVSACGGFTFKDCR 217          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: A0A7S2WFM1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFM1_9STRA)

HSP 1 Score: 249 bits (637), Expect = 9.770e-79
Identity = 123/217 (56.68%), Postives = 171/217 (78.80%), Query Frame = 3
Query:   18 MTIVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHC 668
            MT+VYAL AR K VLAEFTAT+GNFPTVTRVLL+KIP +  +MSYV+D +VFHYIVE G+TYLCM  +  +RR+PFAFLED+K +F AQ+G +IHTA  F+MN  F+P+L++QM+ +NS+P  D++  +++Q+ DV+  M+E+++KVLERGEKIELLVDKTD+LN+ AFRF+++S+ L+  M+W++V+    AAGV   ++     +AC GVTF  C
Sbjct:    1 MTLVYALCARAKTVLAEFTATSGNFPTVTRVLLSKIPPQDGKMSYVYDRYVFHYIVEGGITYLCMTTDTGKRRIPFAFLEDVKRRFQAQFGDAIHTAIPFAMNEAFSPVLKRQMNYYNSDPGADNITQMKTQLGDVKHVMVESIEKVLERGEKIELLVDKTDRLNETAFRFEKSSKQLKEVMFWKRVRMYGIAAGVVSFVVLVIAMSAC-GVTFKQC 216          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: A0A7S3K3T3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3T3_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.880e-78
Identity = 129/221 (58.37%), Postives = 167/221 (75.57%), Query Frame = 3
Query:   18 MTIVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLC--MADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCRS 674
            MTIVYA++ARGK VLAE T+T+GNFPTVTRVLL+KI +   +MSYV+D HVFHYIVENG+TYLC  M  E+++RRV FAFLED K +F  Q+G+  H APAF+MN EF+ ILQ+QM  +NS+P  D L  V+ Q++DV++ M+EN++KVLERGEKIELLVDKTD+LNQ AFRF++ SR LR  ++WRK+K       +    +F   A +CGG  F +C S
Sbjct:    1 MTIVYAVVARGKVVLAEHTSTSGNFPTVTRVLLSKIASIDAKMSYVYDDHVFHYIVENGITYLCLCMNQEKTKRRVAFAFLEDTKIRFQNQFGSIAHRAPAFTMNEEFSKILQRQMIFYNSDPGADDLTKVKHQLDDVKSVMVENIEKVLERGEKIELLVDKTDRLNQSAFRFEKTSRQLRNALFWRKIKVYFFITALIAFAIFLLTAYSCGGFAFPNCSS 221          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: A0A8J2SEP2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEP2_9STRA)

HSP 1 Score: 245 bits (625), Expect = 9.090e-77
Identity = 127/217 (58.53%), Postives = 163/217 (75.12%), Query Frame = 3
Query:   24 IVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCRS 674
            IVYAL+ARG+ VLAEFT+  GNF TVTR LL+KIP    RMSYV D HVFHY V +G+TYLCMAD++ +RR+ FAFLED+K +F + YG+S H A  F++NA+FAP L++Q+  +NS+P  D LQ V++Q+E V+  M+ENV+KVLERGEK ELLVDKTD+L +QAFRF+ +SR L+  M+WRKVK      GVA +L     + ACGGVT   CRS
Sbjct:    2 IVYALVARGRTVLAEFTSQRGNFSTVTRALLSKIPAADGRMSYVCDDHVFHYQVVDGITYLCMADQEGKRRIAFAFLEDVKRRFESNYGSSKHDAAPFALNADFAPTLERQLTFYNSDPSSDDLQRVQTQLEAVKGVMVENVEKVLERGEKFELLVDKTDRLARQAFRFESSSRELKSAMFWRKVKMYSIYFGVAAVLGLILVSWACGGVTAPSCRS 218          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: F0XZ75_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ75_AURAN)

HSP 1 Score: 244 bits (624), Expect = 1.090e-76
Identity = 124/216 (57.41%), Postives = 160/216 (74.07%), Query Frame = 3
Query:   24 IVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCR 671
            IVYA++AR  AVLAEFT T+GNFP+VTRVLL+KI  + ++MSYV+D HVFHY+   G+TYLCMAD+ S+RRV FAFLED + +FGA YG +   APAF+MNA+F P+LQ+QM  +NS+P  D L  V++Q++DVR  M+ENV+KVLERGEKIELLVDKTD+L QQAF+F+  S+ LR  ++WRKV+     A           A ACGG  +  CR
Sbjct:    2 IVYAVVARRTAVLAEFTMTSGNFPSVTRVLLSKITDKDSKMSYVYDQHVFHYVTCEGITYLCMADQGSKRRVAFAFLEDARRRFGAAYGRAARDAPAFTMNADFGPVLQRQMHFYNSDPSSDELAKVKTQLDDVRHVMVENVEKVLERGEKIELLVDKTDRLTQQAFKFENTSKQLRSALFWRKVRMYALFAAALASAALVISAIACGGPHYPKCR 217          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: A0A1W0A2W1_9STRA (Vesicle-associated membrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2W1_9STRA)

HSP 1 Score: 243 bits (620), Expect = 5.330e-76
Identity = 125/219 (57.08%), Postives = 168/219 (76.71%), Query Frame = 3
Query:   18 MTIVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCRS 674
            M IVYAL+ARGK VLAE+TA++GNFPTVTRVLL KIP E ++MSYV+D HVFHYIV++G+TYLCMAD   +RRVPF FLED+K +F   YG    TA AF+MNAEF  ++Q+QMD FN+NP  D++  V+  +++V+  M+EN++KVL RGEK ELLVD+TDQLNQQ+F F+R SR LR+ M+WR +K  +    +AV++++   + AC G  FS C++
Sbjct:    1 MAIVYALVARGKIVLAEYTASSGNFPTVTRVLLAKIPLEDSKMSYVYDMHVFHYIVKDGITYLCMADNDFKRRVPFQFLEDMKNRFLTTYGDRGRTAIAFAMNAEFQHVIQRQMDYFNANPEVDTVIQVQQSLDEVKDTMVENIEKVLGRGEKFELLVDRTDQLNQQSFVFNRKSRKLRKAMWWRSMKMWLCLGCLAVLIIYFVISMAC-GFDFSSCKA 218          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: B7FQ64_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ64_PHATC)

HSP 1 Score: 242 bits (617), Expect = 1.410e-75
Identity = 129/223 (57.85%), Postives = 175/223 (78.48%), Query Frame = 3
Query:   18 MTIVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIH-TAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQG---VRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVI-LMFAAGATACGGVTFSHCR 671
            MTIVYAL++ GK VLAE+TAT+GNFPTVTRVLL+KIP++  RMSY +D  +FHY+VEN + YLCM+DE ++ R+P+A L+DIK +F AQYG     TA AF+ N +F+  L+ +M+ +NS     S+     V+SQI++V++ M+EN++K+LERGEKIELLVDKTD+LNQQAFRF+ +SR+LRRTMYWRK++   A AGVAV+ L+F A A+ CGG++F  CR
Sbjct:    1 MTIVYALVSVGKTVLAEYTATSGNFPTVTRVLLSKIPSQDGRMSYAYDEFLFHYVVENSICYLCMSDEPNKHRIPYACLQDIKQRFVAQYGLEEPLTANAFAYNEDFSKTLEVRMNFYNSTDAESSVDNIGMVKSQIDEVKSNMVENIEKILERGEKIELLVDKTDRLNQQAFRFESSSRNLRRTMYWRKMRC-YAGAGVAVVFLIFIATASLCGGLSFHSCR 222          
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Match: A0A7S3Q5V1_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5V1_9STRA)

HSP 1 Score: 240 bits (612), Expect = 7.040e-75
Identity = 121/221 (54.75%), Postives = 170/221 (76.92%), Query Frame = 3
Query:   18 MTIVYALIARGKAVLAEFTAT--AGNFPTVTRVLLNKIPTEATRMSYVWDAHVFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGA-SIHTAPAFSMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLERGEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVILMFAAGATACGGVTFSHCR 671
            M I+Y+L++RG  VLAE+TAT   GNFPTVTR+LL KIP    +M+YV+D +VFHY+VE+G+ YLCM+DE+++ R+P+AFL+D+K  F  ++G  + H A AFS N EF+PI+Q++MD +NS    D++  +++QI+DV+ GM++N++KVLERGEKIELLVDKTD+LNQQAFRF+  SR+LRR MYWRK++     + VA I++F   A  CGG+ F  CR
Sbjct:    1 MPILYSLVSRGNTVLAEYTATLATGNFPTVTRMLLAKIPAADGKMTYVYDDYVFHYVVESGICYLCMSDEKNKHRLPYAFLQDMKDLFLGKFGMDAAHRAIAFSFNEEFSPIIQQRMDHYNSGGAMDNIDALKNQIDDVKEGMVQNIEKVLERGEKIELLVDKTDRLNQQAFRFESTSRNLRRHMYWRKIRNVGICSAVAFIVIFILVAEGCGGIDFIKCR 221          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig72.15415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRG5_ECTSI1.700e-14699.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YGH9_9STRA4.900e-8762.84Longin-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2BSP6_9STRA1.100e-8056.94Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2WFM1_9STRA9.770e-7956.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K3T3_9STRA1.880e-7858.37Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2SEP2_9STRA9.090e-7758.53Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0XZ75_AURAN1.090e-7657.41Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1W0A2W1_9STRA5.330e-7657.08Vesicle-associated membrane protein n=1 Tax=Thraus... [more]
B7FQ64_PHATC1.410e-7557.85Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3Q5V1_9STRA7.040e-7554.75Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig72contigE-siliculosus-1a_M_contig72:700256..703803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size660
Model size1103
Exons5
Ec32 orthologEc-18_004450.1
Ec32 ortholog descriptionLongin domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko04131,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.U
EggNOG OGsCOG5143@1,KOG0859@2759
EggNOG free text desc.SNAP receptor activity
GOsGO:0000149,GO:0000288,GO:0000323,GO:0000932,GO:0000956,GO:0001101,GO:0001775,GO:0001906,GO:0001909,GO:0002228,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002278,GO:0002283,GO:0002285,GO:0002323,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002447,GO:0002449,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002703,GO:0002705,GO:0002886,GO:0002888,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005767,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005886,GO:0006139,GO:0006259,GO:0006355,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006810,GO:0006869,GO:0006887,GO:0006888,GO:0006892,GO:0006893,GO:0006897,GO:0006906,GO:0006909,GO:0006911,GO:0006914,GO:0006928,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006996,GO:0007017,GO:0007018,GO:0007034,GO:0007041,GO:0007275,GO:0007399,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009890,GO:0009892,GO:0009986,GO:0009987,GO:0010008,GO:0010033,GO:0010118,GO:0010324,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010646,GO:0010647,GO:0010720,GO:0010769,GO:0010770,GO:0010817,GO:0010876,GO:0010970,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0015031,GO:0015074,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016070,GO:0016071,GO:0016192,GO:0016236,GO:0017148,GO:0017156,GO:0017157,GO:0019219,GO:0019222,GO:0019439,GO:0019905,GO:0022008,GO:0022411,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023056,GO:0030014,GO:0030015,GO:0030027,GO:0030101,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030154,GO:0030285,GO:0030658,GO:0030659,GO:0030662,GO:0030665,GO:0030666,GO:0030667,GO:0030670,GO:0030672,GO:0030705,GO:0030897,GO:0031090,GO:0031091,GO:0031143,GO:0031201,GO:0031224,GO:0031252,GO:0031300,GO:0031301,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031344,GO:0031346,GO:0031347,GO:0031349,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032101,GO:0032103,GO:0032268,GO:0032269,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032940,GO:0032984,GO:0032991,GO:0033003,GO:0033005,GO:0033006,GO:0033008,GO:0033036,GO:0033157,GO:0033993,GO:0034196,GO:0034197,GO:0034248,GO:0034249,GO:0034613,GO:0034622,GO:0034641,GO:0034655,GO:0035493,GO:0035577,GO:0035770,GO:0036230,GO:0036464,GO:0042119,GO:0042175,GO:0042221,GO:0042267,GO:0042582,GO:0042886,GO:0042995,GO:0043001,GO:0043005,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043269,GO:0043270,GO:0043299,GO:0043300,GO:0043302,GO:0043304,GO:0043306,GO:0043307,GO:0043308,GO:0043312,GO:0043320,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0044754,GO:0045055,GO:0045087,GO:0045177,GO:0045184,GO:0045202,GO:0045321,GO:0045335,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045921,GO:0046483,GO:0046649,GO:0046700,GO:0046883,GO:0046887,GO:0046903,GO:0046907,GO:0047496,GO:0048193,GO:0048280,GO:0048284,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048699,GO:0048731,GO:0048814,GO:0048856,GO:0048869,GO:0050727,GO:0050729,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050865,GO:0050867,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051588,GO:0051590,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060341,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0061951,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072384,GO:0072657,GO:0072659,GO:0080090,GO:0080134,GO:0090087,GO:0090150,GO:0090174,GO:0090304,GO:0090313,GO:0097159,GO:0097305,GO:0097352,GO:0097458,GO:0097708,GO:0098563,GO:0098588,GO:0098657,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:0098876,GO:0099023,GO:0099024,GO:0099111,GO:0099501,GO:0099503,GO:0099518,GO:0120025,GO:0120035,GO:1900006,GO:1900483,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901700,GO:1903305,GO:1903307,GO:1903335,GO:1903506,GO:1903530,GO:1903532,GO:1903533,GO:1903593,GO:1903595,GO:1903827,GO:1905475,GO:1990778,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2001141
KEGG Pathwayko04130,map04130
KEGG koko:K08511,ko:K08515
Preferred nameVAMP7
Seed eggNOG ortholog2880.D8LRG5
Seed ortholog evalue4.7e-117
Seed ortholog score427.2
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935992.9704018-UTR-E-siliculosus-1a_M_contig72:700255..7002721622935992.9704018-UTR-E-siliculosus-1a_M_contig72:700255..700272Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig72 700256..700272 +
1696250881.6757946-UTR-E-siliculosus-1a_M_contig72:700255..7002721696250881.6757946-UTR-E-siliculosus-1a_M_contig72:700255..700272Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig72 700256..700272 +
1622935993.6391068-UTR-E-siliculosus-1a_M_contig72:703377..7038031622935993.6391068-UTR-E-siliculosus-1a_M_contig72:703377..703803Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig72 703378..703803 +
1696250881.7478938-UTR-E-siliculosus-1a_M_contig72:703377..7038031696250881.7478938-UTR-E-siliculosus-1a_M_contig72:703377..703803Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig72 703378..703803 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935992.9947762-CDS-E-siliculosus-1a_M_contig72:700272..7004071622935992.9947762-CDS-E-siliculosus-1a_M_contig72:700272..700407Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 700273..700407 +
1696250881.6952522-CDS-E-siliculosus-1a_M_contig72:700272..7004071696250881.6952522-CDS-E-siliculosus-1a_M_contig72:700272..700407Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 700273..700407 +
1622935993.5866866-CDS-E-siliculosus-1a_M_contig72:701266..7013711622935993.5866866-CDS-E-siliculosus-1a_M_contig72:701266..701371Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 701267..701371 +
1696250881.706736-CDS-E-siliculosus-1a_M_contig72:701266..7013711696250881.706736-CDS-E-siliculosus-1a_M_contig72:701266..701371Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 701267..701371 +
1622935993.6005633-CDS-E-siliculosus-1a_M_contig72:701699..7018401622935993.6005633-CDS-E-siliculosus-1a_M_contig72:701699..701840Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 701700..701840 +
1696250881.7157888-CDS-E-siliculosus-1a_M_contig72:701699..7018401696250881.7157888-CDS-E-siliculosus-1a_M_contig72:701699..701840Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 701700..701840 +
1622935993.61493-CDS-E-siliculosus-1a_M_contig72:702557..7026411622935993.61493-CDS-E-siliculosus-1a_M_contig72:702557..702641Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 702558..702641 +
1696250881.7262793-CDS-E-siliculosus-1a_M_contig72:702557..7026411696250881.7262793-CDS-E-siliculosus-1a_M_contig72:702557..702641Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 702558..702641 +
1622935993.6267757-CDS-E-siliculosus-1a_M_contig72:703182..7033771622935993.6267757-CDS-E-siliculosus-1a_M_contig72:703182..703377Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 703183..703377 +
1696250881.7372665-CDS-E-siliculosus-1a_M_contig72:703182..7033771696250881.7372665-CDS-E-siliculosus-1a_M_contig72:703182..703377Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig72 703183..703377 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig72.15415.1prot_E-siliculosus-1a_M_contig72.15415.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig72 700273..703377 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig72.15415.1

>prot_E-siliculosus-1a_M_contig72.15415.1 ID=prot_E-siliculosus-1a_M_contig72.15415.1|Name=mRNA_E-siliculosus-1a_M_contig72.15415.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=220bp
MTIVYALIARGKAVLAEFTATAGNFPTVTRVLLNKIPTEATRMSYVWDAH
VFHYIVENGVTYLCMADEQSRRRVPFAFLEDIKTKFGAQYGASIHTAPAF
SMNAEFAPILQKQMDAFNSNPPGDSLQGVRSQIEDVRAGMLENVDKVLER
GEKIELLVDKTDQLNQQAFRFDRASRSLRRTMYWRKVKTGVAAAGVAVIL
MFAAGATACGGVTFSHCRS*
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mRNA from alignment at E-siliculosus-1a_M_contig72:700256..703803+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig72.15415.1 ID=mRNA_E-siliculosus-1a_M_contig72.15415.1|Name=mRNA_E-siliculosus-1a_M_contig72.15415.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3548bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig72:700256..703803+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TGAGGGCGCCAGCAGCCATGACGATCGTGTACGCGCTGATCGCGCGAGGG AAGGCGGTGTTGGCGGAATTCACCGCTACGGCGGGGAACTTCCCGACGGT TACAAGGGTCCTCCTCAACAAGATCCCTACCGAGGCAACAAGAATGTCCT ACGTGAGTCCCCTGTAGGGCGCCGGGTTCCGTGTTCGGCGACAGCAGTTC GGTACGGTAGATGACTCGGACTTCTTGTGCCAGACCTTGTGTGTATGTCC TGGAGCGCATGTTCCGAGTGTGAACGGGTAGTCCAAAGTCGAACCGTCGA CCAGGGAGGCCGTAACCCAGTATATTTCATCGGAGGGTGCACATTAAAAC TTCCGGTAGCTGTTGGAGGCGGACAGAGCGCTTATCTTGATGTTGGATTG TTGCACCATTACCATTTGCTGACAGCCTCTTGCACGCGGATTCCGGCGAG CCCTTTTTTTGTTGTGGTGACGGCAGAGCGCGGTGTCAAGGAGGCATTGG CTTTTGTAGTTGATGCTGAGATTACTGTGCACACCGGTGGCAACACGGGA TCTCGGGAATAGTCTTGTGTGCCTGCTTGTTCAATGTTGGTGATGTTGGA GAGAGACCTTTTTACGCAAGCAAGAGGGATACCGCCGTTGACCGACCAGT TAAGGTACAGCGTACTCCAAGGTACCTTAAGAATTGCTGACTTTCGTCAA AGCTATTTCGATGGAAAATACGAGCTGGCGTGGTGAACACACAAATATCG GGGGCGCTATGTTTTTTAGCAACCTTCGACCCAGAGACGAAAAACGACAA TACGAGCATCGAAACAATGAACTACGGGCGTACATGCTTGCCGATGGCAC GTTACGCGTTTAGTTGTTTCAGTTGAACAGGGCGGCCATATGGTAGCTAT GATGCTTGTTCAGCGCGAATCCTACACGCCTGCCTGGCCCTGACAAGTTC CTTCCTGTTTCGTTTTCCCGTGGCCTGGCTTCCTGAACGATGTCCTGATG GATTGCGACAGGTTTGGGACGCTCACGTGTTCCACTACATCGTGGAGAAT GGGGTCACTTACCTGTGTATGGCTGACGAGCAATCACGGCGACGGGTGCC CTTCGCCTTTCTCGAGGTAACAACCATTCTATTTCTACCGCTGCTGTTGA CGGGTGCTGTTGGTCATTCGTAGCGCCACACCAGCGCGTTGTTTCGTGTC GGGTCCATTTGTCTTCTCTCTTCTCTCCTAGAAAGGATGATTGCACACTC GACCGGGGCGTCCTTGGATGTTTCAAACCGTCATCATGGAATGTTTTTTC GTTTGTTCCACACCATGCCCTTGTGACTCACAAGAGGTCTGTAGCATAGA TTTGTGATGAAATTGGTGTGCACTAGTGCTGTCGCGTCGCGGGTATCAAT CCCTTCCCCTCGATTGGACCCCATCTTGCTCTGATTCTTCACAGGACATC AAAACTAAGTTCGGCGCGCAATACGGAGCCAGCATCCACACCGCACCGGC CTTCAGCATGAATGCCGAGTTCGCCCCCATCCTTCAAAAGCAAATGGACG CGTTCAACTCGAACCCTCCAGGGGACTCCCTACAGGTGCAGTGCGCCAGC TGTCGGCCCCCTTCTACAGTAAAACGTGCTGGTTGAACGTCCGTCCTTCA CTGATAAGCCCAGAGATTTGGAATCCCTGCCGCCAGAAGGGTGTTCAACT AGTTCGGCAGGTTGTTCGTTTGTTAGTCTCTTCCCCGCAAGAAGCATGCT CGTGATCGTTGCCGAGAGGGGGGCTCCTACAGCCACAGACAGGCAACACT GCTGTGTGGGATGTGTCCCAATGTTGTCATTCCAGGCTATGTAGTGCTGT ACGTGAATCGAAGAAGACCCGAGGGGCCCCACCTTCTGCCCATTTTCGTT TTTCCCATTTTTTTTGTTGTCACAGAATCCGACCCCTCGACGGTGTCTCG GACCCCCGAGTCACAATGTGTAAGCTTTCCTTTGAAATTTCGCCGCTTCG ACTTCGTAGAGCGCCCCCTCGATCGCCTCGGAATAATTACTGTACCCTCC TGTGTCCTACATCTTCCAACACTTCTTTTTAGCGGTAGATGTTAATCCCC AGTTCTGTACGGGTGCCAGGGTGCGAGGGCAAAAAGCTGGCAAGTATTTC TTCCATTACATCCCTTTTTGCAACGTTGGTCTCCAGGAAAGGCAACATTT GTTGATCGCTAGTGCCTTGTGGCCCGTCTCACTGCTTGTTTGTCTCTCGT CTGACCCTGTTGGCTTTGGTGCTCTTCTCGTTGTCCCCATTTTCGCCCTC AGGGGGTGAGGTCACAAATCGAAGACGTGCGCGCGGGCATGCTGGAGAAT GTCGACAAGGTGTTGGAGAGAGGAGAAAAGATTGAGGTGCGTGACTCATG AACGAAGTGGATAGACACGTCATGCTGGGGCAGAGGTGATGTTGTTTTGT GCGCCCTTTCTTGACGTTCTGTACATCACCGGGCTGTCGTAGATTGTTCC TCCATCGCATGCCTTCAGTAGACGGTGTTGTTCGTCCCAAGAGAACAATC ACCCCGCGCCCTCCGGTCGATGCGATGCGATAGGCCTGCCTATTAGTCGG TGATAAACCGGCACCATCTGTATTGGGTCTACGTACGGGAGCGAGCGTCG AAGGCAATACCCTACAGCCGTGGGATGCTCTTGCATCTTTCCCCGTCGCT CCTGCATTTCGTGAAGTTGGGTGATTCCTCCCTTTGATTCCACGTGCCTT ATTTGTAGTGAGGTACGCAGAGACAAGCGGGGAGTCGGCGTGATTTCTGC CTGCCCGAAAGGTGCGTTCTACCATCATCTGGCGGGTGTTCTCCAGGAAG CACACAAAAGCTGACCCCCCCCCGCCCACCGCCCCGCGCTGAACACTCAC TCTACTACCTTTGTTCCTTCTGACCAGTTGCTGGTGGACAAAACCGATCA ACTGAACCAACAAGCGTTCCGTTTCGACCGGGCATCGAGGAGCTTAAGAC GGACAATGTACTGGCGGAAGGTCAAGACCGGTGTCGCCGCAGCTGGAGTA GCAGTCATCCTCATGTTCGCCGCTGGGGCGACGGCTTGCGGGGGGGTGAC CTTCTCCCACTGCCGATCTTGAGTCGTTGCTGTGTTGGGGACTCGGTGTC GAAAGTGTGCCAACGGTGAACGAGAGCATGTTCGCTATTCTGCATGTAGG GGGGGGATCGAACATGCAAGAACTGCTGTGTATCTACGTATGCCGCCATT ATGCAACGCGGCAAGGGGTTGCTTCGACGAACAGGATAATATTGCTTTGC TGTGATGGGTGTTCCGCGCACAACGCGTTCTCTTTGTTAGGCTGCATTGC CTGCGGCTAGCTCCTTGGTACGTGATCAACCGATAGTGAGTATAAGTCGT ATTACAGCAATAGTTGTTCTGTGTCGTTGCACGTGGTTGAACCCTGCGGC TGCCTAGCTAGTTTAGACTTTTTTTGTTCCCTACTTGATGCAATGGTGGT CTGGTGTACTCTGTAGACACGTGGCTATTTGTATGTTTCGGTTGATCA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig72:700256..703803+

>mRNA_E-siliculosus-1a_M_contig72.15415.1 ID=mRNA_E-siliculosus-1a_M_contig72.15415.1|Name=mRNA_E-siliculosus-1a_M_contig72.15415.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1320bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig72:700256..703803+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGACGATCGTGTACGCGCTGATCGCGCGAGGGAAGGCGGTGTTGGCGGA
ATTCACCGCTACGGCGGGGAACTTCCCGACGGTTACAAGGGTCCTCCTCA
ACAAGATCCCTACCGAGGCAACAAGAATGTCCTACATGACGATCGTGTAC
GCGCTGATCGCGCGAGGGAAGGCGGTGTTGGCGGAATTCACCGCTACGGC
GGGGAACTTCCCGACGGTTACAAGGGTCCTCCTCAACAAGATCCCTACCG
AGGCAACAAGAATGTCCTACGTTTGGGACGCTCACGTGTTCCACTACATC
GTGGAGAATGGGGTCACTTACCTGTGTATGGCTGACGAGCAATCACGGCG
ACGGGTGCCCTTCGCCTTTCTCGAGGTTTGGGACGCTCACGTGTTCCACT
ACATCGTGGAGAATGGGGTCACTTACCTGTGTATGGCTGACGAGCAATCA
CGGCGACGGGTGCCCTTCGCCTTTCTCGAGGACATCAAAACTAAGTTCGG
CGCGCAATACGGAGCCAGCATCCACACCGCACCGGCCTTCAGCATGAATG
CCGAGTTCGCCCCCATCCTTCAAAAGCAAATGGACGCGTTCAACTCGAAC
CCTCCAGGGGACTCCCTACAGGACATCAAAACTAAGTTCGGCGCGCAATA
CGGAGCCAGCATCCACACCGCACCGGCCTTCAGCATGAATGCCGAGTTCG
CCCCCATCCTTCAAAAGCAAATGGACGCGTTCAACTCGAACCCTCCAGGG
GACTCCCTACAGGGGGTGAGGTCACAAATCGAAGACGTGCGCGCGGGCAT
GCTGGAGAATGTCGACAAGGTGTTGGAGAGAGGAGAAAAGATTGAGGGGG
TGAGGTCACAAATCGAAGACGTGCGCGCGGGCATGCTGGAGAATGTCGAC
AAGGTGTTGGAGAGAGGAGAAAAGATTGAGTTGCTGGTGGACAAAACCGA
TCAACTGAACCAACAAGCGTTCCGTTTCGACCGGGCATCGAGGAGCTTAA
GACGGACAATGTACTGGCGGAAGGTCAAGACCGGTGTCGCCGCAGCTGGA
GTAGCAGTCATCCTCATGTTCGCCGCTGGGGCGACGGCTTGCGGGGGGGT
GACCTTCTCCCACTGCCGATCTTGATTGCTGGTGGACAAAACCGATCAAC
TGAACCAACAAGCGTTCCGTTTCGACCGGGCATCGAGGAGCTTAAGACGG
ACAATGTACTGGCGGAAGGTCAAGACCGGTGTCGCCGCAGCTGGAGTAGC
AGTCATCCTCATGTTCGCCGCTGGGGCGACGGCTTGCGGGGGGGTGACCT
TCTCCCACTGCCGATCTTGA
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