mRNA_E-siliculosus-1a_M_contig71.15332.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig71.15332.1
Unique NamemRNA_E-siliculosus-1a_M_contig71.15332.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5KNC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNC4_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 4.970e-75
Identity = 143/304 (47.04%), Postives = 193/304 (63.49%), Query Frame = 3
Query:  174 SSSLADAQPRQIEKTRLNIKELLEVEHEL-----STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLEQPRLKGTIEDYLRDAGVAKCSLDALVGGIA------RECAARVYTTNVKSFESTKRKVEVRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKI-QDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQ 1049
            S S  D   ++++ T  +IK +L++  +L     S + SAK NL+ YLQV+AV+ +++I+  LYF LR DE FDEL RI        L QP   G+ EDYL  A  AK  LD L+  +A      RE    V   +VK+ +ST RK    G IR VTD+AR +V+CDT + +  +FE L  K+ Q  GG VL V NGF+ +YG NGYRDVK+ V++  H+CEIQLH  PF+ L+DGQH++YEWSR L VT +MRP HLFKN    +L RM  L+R DWC+T+  L +LLH AG Y+++ EL+RQ
Sbjct:  133 SPSARDDLGKRMDPTGSDIKNILQLASDLKELPDSIERSAKMNLVTYLQVDAVRKYERISTGLYFDLRRDEGFDELLRIHEKQPEGDLVQPMETGSFEDYLLQAEHAKLCLDGLLESVAPLGTPGRE----VILADVKTLKSTTRKANNWGGIRYVTDLARGTVICDTPRDVAQVFEALTLKVGQVPGGNVLRVSNGFIRNYGRNGYRDVKMFVIIAEHICEIQLHLRPFHCLKDGQHEIYEWSRALRVTADMRPSHLFKNMEPGMLERMTQLSRDDWCSTKRALSSLLHTAGHYEEARELMRQ 432          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: D8LH34_ECTSI (Peptidase-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH34_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.110e-64
Identity = 137/284 (48.24%), Postives = 173/284 (60.92%), Query Frame = 3
Query:  225 NIKELLEVEHELST-----DHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANN-GATLEQPRLKGTIEDYLRDAGVAKCSLDALVGGIARECAARV--YTTNVKSFESTKRKVEVRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
            NI+ELL++E EL+T     + SAK NLLK+LQV AV  +++++ ALYF LR D  F EL  +   N+ G T  QP   G+IEDYL  A  AK  LD L+  IA     R       +KS ES  RK +  G+ R VTD AR + VC T   +V++  LL   I  +  + L V NGFL +YG NGYRDVK+ VLL  H CEIQLH   FY L+DGQH+VYEWSR L VT E+RP+HLFK     IL  MI LA  DW +T   L  LLH AG+Y ++ +L  Q+
Sbjct:    7 NIRELLQLEEELNTLPCSIERSAKVNLLKFLQVNAVVEYERVSTALYFDLRRDAGFHELSLVPEKNHLGHTCSQPMEAGSIEDYLVQAEEAKACLDRLIYSIATPGDPRWEGIPAPIKSKESASRKADKLGNARFVTDFARATFVCKTPHDLVEVIALLTDGIGQEDNL-LRVSNGFLRNYGRNGYRDVKMIVLLAGHACEIQLHLRSFYGLKDGQHEVYEWSRTLKVTAEIRPEHLFKGMQPEILELMIQLAAADWHSTNLALVPLLHRAGKYAEARDLQLQI 289          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5JHK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK0_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 4.790e-51
Identity = 122/302 (40.40%), Postives = 164/302 (54.30%), Query Frame = 3
Query:  222 LNIKELLEVEHELST---------DHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATL-----------EQPRLKGTIEDYLRDAGVAKCSLDALVGGIAR---ECAARVYTTNVKSFESTKRKVEVR--GSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
            ++I ELL +E EL           D  AK NLLK+LQ+ AV  +++  D LY+ L      + L  I  A     L           E  R    +E YL DA +AK  LD LV  IA+   EC   V+   VKS  ST+RK      G +RKV DMAR+SV+CD  +++   +  +    Q   G VL V NGF + +  +GYRDVK++ +++ H+CEIQLH   F+ L+ GQH VYEW+R L VT  MR ++LF+  S+ I   MI LA  +W  T   LP L  AAG+YDQ+ E  RQV
Sbjct:    3 VDIAELLRLEAELENSCEDCRNPYDRDAKLNLLKFLQIRAVLQYEEAYDRLYYELNKHGGLECLREIAPARLKDLLQPKVLELQDCNEDVRFAAQLEFYLADAELAKNRLDELVADIAKHTGEC--EVHCAEVKSRASTQRKASKSYGGDVRKVADMARVSVICDNPEALKRAYLAIVESFQ---GDVLRVANGFNSDWMPSGYRDVKVNPVVDEHLCEIQLHLREFFTLKGGQHAVYEWARDLKVTTIMRAENLFEFLSREITEEMIGLAERNWHGTGRFLPRLQLAAGQYDQAEEGFRQV 299          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 2.460e-48
Identity = 115/301 (38.21%), Postives = 173/301 (57.48%), Query Frame = 3
Query:  222 LNIKELLEVEHELSTD---------HSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLEQPR------------LKGTIEDYLRDAGVAKCSLDALVGGIARECAA-RVYTTNVKSFESTKRKVE--VRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
            ++I+ELL +E+EL              AK N+LK LQV+ V  FQ   D LY+ L  +   + L  I  A +   + QP+            L+  ++ YL DA +AK  LD L+  +A + +  +V   +VKS+EST+RK      G +RKV DMAR++V+C T +++ + +  +    +     VL V+NGF + +  +GYRDVKL+ ++ +H+CEIQLH   F+ L+ GQH VYEW+R LNVT EMR + LFKN S  ++  M+ LA  +W  T   LP L  AAG+YD++ E  R++
Sbjct:    3 VDIEELLRLENELKASCERETSPATPDAKMNILKCLQVQTVVQFQLAYDDLYYELNKEGGLECLRSIAPARSTGIV-QPKVLDPQNCDEGGQLENQLQFYLADAELAKPHLDELITKVAHDSSKYKVQCADVKSWESTRRKASNSCGGDVRKVADMARVAVICATPEALKEAYLAIMGLPEAN---VLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDRAEESHREL 299          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: D7FTB3_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB3_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 8.040e-48
Identity = 116/300 (38.67%), Postives = 169/300 (56.33%), Query Frame = 3
Query:  222 LNIKELLEVEHEL----------STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATL-----------EQPRLKGTIEDYLRDAGVAKCSLDALVGGIARECAA-RVYTTNVKSFESTKRKVE--VRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQ 1049
            ++IKE+L +E EL          S    AKTNLLKY+QV  V GF++  D L++ L  +   + L  I  A +               E  RL+  ++ YL DAG+AK  LD LV  +A++     +    VKS EST+RK      G +RK+TDMAR++V+C+T +++   F  +   +Q +   VL V NGF + +  +GYRDVK++ ++  H+CEIQL    F  L+  QH VYEW+R LNVT EM P+ +F+N S  ++  M+ LA  DW  TR  L  L  AAG+Y Q+ + L+Q
Sbjct:   46 IDIKEVLRLEDELKKTLRESPTSSIRLDAKTNLLKYVQVNTVLGFEEAYDDLFYELNENGGLECLRSIAPARSKDRFQPKISELQDCDEGDRLEQQLQFYLTDAGLAKPFLDVLVASVAQDSTKYEIQRVGVKSRESTRRKAIKFCGGDVRKITDMARVTVICETPEALEQAFSAILGSLQPQD--VLRVANGFNSDWMPSGYRDVKVNAVVHEHLCEIQLQLREFVALKSDQHAVYEWARDLNVTSEMEPEDMFENISPEVVEEMMHLATEDWHGTRPCLEHLQLAAGQYAQAEKGLKQ 343          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5KKK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK7_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.120e-47
Identity = 113/284 (39.79%), Postives = 164/284 (57.75%), Query Frame = 3
Query:  225 NIKELLEVEHEL-----STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIK-SANNGATLEQPRLKGTIEDYLRDAGVAKCSLDALVGGIAREC-AARVYTTNVKSFESTKRKVE-VRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
            NI+ELLE+E E+     S D  AK NLLKYLQV+ VQ +Q   D LYFTL    + + L R   +A     +EQP+  G +++YL DA  A+  LD L+  +   C          KS +S  RK E   G++ K+ DMAR +VVC T + +   + ++ A++  +   VL V+NGF + +  +GYRDVK++ ++  H+CEIQLH   F++L+DGQH VYEW+R L VT E  P +LF + S   L  MI LA  +W      LP+L    G+Y ++ E  R++
Sbjct:   10 NIQELLELEKEIRSKIPSLDRDAKVNLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLEGLRRKNMAAARLKPVEQPKKLG-LQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGTKSPDSVMRKAERFNGNVGKIADMARAAVVCGTPEDLERAYTVIMARLNPQD--VLRVKNGFSSDWMPSGYRDVKVNPVVCGHLCEIQLHLREFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEEMIRLAEVNWAGAEHVLPSLQLYMGKYVEAEEAFRKL 290          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: D7FY64_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY64_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 4.820e-46
Identity = 117/296 (39.53%), Postives = 164/296 (55.41%), Query Frame = 3
Query:  222 LNIKELLEVEHEL-----STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLEQPR------------LKGTIEDYLRDAGVAKCSLDALVGGIARECAARV-YTTNVKSFESTKRKV--EVRGSIRKVTDMARISVVCDTIKSMV----DLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAE 1037
            L+I ELL++E EL     S +  AK NLLK+LQV+ V+ +++  D+LY+ L  D   + L RI+  N  ++L QP             L   ++ Y   A  AK  LD LV  +      R      VKS EST+RK      G +R++ DMAR+SV+CDT + +     DL E ++         V  VRNGF + +  +GYRDVK++ ++  H+CEIQL    F+ L+DGQH+VYEW+R L V+ EM  DHLFK  S  I   M+ LA+ +W  TR  LP LL  A +Y Q+ E
Sbjct:    5 LDINELLQMEIELEGSDLSLERDAKVNLLKFLQVKTVKKYERAYDSLYYELNMDGGLECLHRIEELNPKSSLFQPEGLEPQGCDADENLGKQLDFYREGALRAKVQLDKLVRELVNGHQGRTGLYAEVKSLESTRRKATKSYGGDVRRLADMARVSVICDTPEDLELACKDLMESVEPHH------VKRVRNGFNSGWKPSGYRDVKVNTVVSGHLCEIQLQLGSFFKLKDGQHEVYEWARELKVSTEMDADHLFKMWSPGITEEMVRLAQQNWRRTRFYLPDLLADAAQYVQAEE 294          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.270e-45
Identity = 115/300 (38.33%), Postives = 166/300 (55.33%), Query Frame = 3
Query:  222 LNIKELLEVEHELSTDHS---------AKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLEQPR------------LKGTIEDYLRDAGVAKCSLDALVGGIARECAA-RVYTTNVKSFESTKRKVEVR--GSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQ 1049
            ++I ELL +E EL +  +         AK NLLKYLQ++ V  FQ   D +Y+ L      D L  I    +     QP+            L+  +E YL DA +AK  LD LV  +A + +   V    +KS EST+RK      G +RKV DMAR++V+C T +++ + + L   ++ +    VL V+NGF + +  +GYRDVKL+ ++ +H+CEIQLH   F++L+ GQH VYEW+R LNVT +MR   LFKN S  +   MI LA  +W  T   LP +   AG+YD + +  RQ
Sbjct:    4 VDISELLRLEAELKSSRARETWTVSLDAKVNLLKYLQIQTVLQFQAAYDDMYYELHQTGGLDCLRSIAPVRSTGVF-QPKVLDLQDCGQDDQLEKQLEFYLADAELAKACLDELVMNVAHDSSKYEVQCVEIKSRESTRRKASTGYDGDVRKVADMARVTVICATPEALKEAY-LAIMELPE----VLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLRGFFELKGGQHAVYEWARELNVTTDMRSKDLFKNLSPEVSEEMIRLAGQNWAGTAYVLPDVQLDAGQYDLAEKSHRQ 297          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5JK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK27_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 3.100e-45
Identity = 105/270 (38.89%), Postives = 153/270 (56.67%), Query Frame = 3
Query:  288 LLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLE------------QPRLKGTIEDYLRDAGVAKCSLDALVGGIAREC-AARVYTTNVKSFESTKRKVE--VRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
            +LKYLQV+ V  ++   DALY+ L  +   + L  I   + G  L+              RL   +  YL DA +AK  LD LV   A       V+   VKS EST+RK      G +RKV DMAR++V+CDT +++  +F  +   +Q +   VL V+NGF + +   GYRDVK++ ++  H+CEIQL    F+ L+ GQH VY W+R LNV  +M+   LFKN S+ ++  MI LAR +WC T   LP +  AAG+Y+++ + LRQ+
Sbjct:    1 MLKYLQVQTVLQYEAAYDALYYELNKEGGLECLRNIAPVDTGDPLQPKVLNLQDYSNADDRLAKQLRFYLADAELAKKRLDELVTNAAEGLETCNVHCVVVKSLESTRRKASQFCGGDVRKVADMARVTVICDTPEALKQVFSKIMGLLQPQD--VLRVKNGFDSDWTPGGYRDVKVNPVVNEHLCEIQLQLRNFFTLKSGQHAVYTWARDLNVVTKMQATDLFKNVSRLVMEEMIHLARQNWCGTWHWLPEIQLAAGQYEEAEKGLRQL 268          
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 7.090e-45
Identity = 115/300 (38.33%), Postives = 165/300 (55.00%), Query Frame = 3
Query:  222 LNIKELLEVEHEL---------STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATL-----------EQPRLKGTIEDYLRDAGVAKCSLDALVGGIARECAA-RVYTTNVKSFESTKRKVE--VRGSIRKVTDMARISVVCDTIKSMVDLF-ELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQ 1049
            ++I +LL +E EL         ST   AK NLLKYLQV+ V  FQ   D LY+ L      D L  I    +               E  +L+  ++ YL DA +AK  LD LV  +A + +   V   +VKS EST+RK      G +RKV D+AR++V+C T +++ + +  +++   Q     VL ++NGF + +  +GYRDVKL+ ++  H+CEIQLH   F+ L+ GQH VYEW+R LNVT +MR + LF+  S  +   M+ LA  +W  T   LP L  AAGEYD + +  RQ
Sbjct:    4 VDINDLLRLEAELKTSRERETSSTSLDAKVNLLKYLQVQTVLQFQAAYDDLYYELSKTGGLDCLRTIAPVPSTGVFQPKVFDPQDCGEDEQLENQLQFYLADAELAKAHLDELVMNVAHDMSKYEVQFVDVKSRESTRRKASRFCDGDVRKVADIARVTVICTTPEALKEAYLAIMELPTQQ----VLLIKNGFKSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHAVYEWARDLNVTTDMRCEDLFETLSAKVTKEMLHLAGENWRGTGYVLPDLQLAAGEYDLAEKSQRQ 299          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNC4_9PHAE4.970e-7547.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH34_ECTSI1.110e-6448.24Peptidase-like n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JHK0_9PHAE4.790e-5140.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSC7_9PHAE2.460e-4838.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTB3_ECTSI8.040e-4838.67Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ect... [more]
A0A6H5KKK7_9PHAE1.120e-4739.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY64_ECTSI4.820e-4639.53Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5J9V8_9PHAE1.270e-4538.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK27_9PHAE3.100e-4538.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L3_ECTSI7.090e-4538.33Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig71contigE-siliculosus-1a_M_contig71:838888..841644 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size450
Model size1114
Exons3
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03019,ko04812
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.C
EggNOG OGsCOG0457@1,KOG1840@2759
EggNOG free text desc.determination of stomach left/right asymmetry
KEGG Pathwayko05132,map05132
KEGG koko:K10407
Seed eggNOG ortholog2880.D8LH34
Seed ortholog evalue1.9e-32
Seed ortholog score145.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig71.15332.1prot_E-siliculosus-1a_M_contig71.15332.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig71 840764..841594 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935977.6277914-UTR-E-siliculosus-1a_M_contig71:838887..8390931622935977.6277914-UTR-E-siliculosus-1a_M_contig71:838887..839093Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig71 838888..839093 +
1696250874.2132375-UTR-E-siliculosus-1a_M_contig71:838887..8390931696250874.2132375-UTR-E-siliculosus-1a_M_contig71:838887..839093Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig71 838888..839093 +
1622935977.6429052-UTR-E-siliculosus-1a_M_contig71:840355..8407631622935977.6429052-UTR-E-siliculosus-1a_M_contig71:840355..840763Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig71 840356..840763 +
1696250874.230835-UTR-E-siliculosus-1a_M_contig71:840355..8407631696250874.230835-UTR-E-siliculosus-1a_M_contig71:840355..840763Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig71 840356..840763 +
1622935977.6931071-UTR-E-siliculosus-1a_M_contig71:841594..8416441622935977.6931071-UTR-E-siliculosus-1a_M_contig71:841594..841644Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig71 841595..841644 +
1696250874.2630453-UTR-E-siliculosus-1a_M_contig71:841594..8416441696250874.2630453-UTR-E-siliculosus-1a_M_contig71:841594..841644Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig71 841595..841644 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935977.6575584-CDS-E-siliculosus-1a_M_contig71:840763..8408411622935977.6575584-CDS-E-siliculosus-1a_M_contig71:840763..840841Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig71 840764..840841 +
1696250874.2435982-CDS-E-siliculosus-1a_M_contig71:840763..8408411696250874.2435982-CDS-E-siliculosus-1a_M_contig71:840763..840841Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig71 840764..840841 +
1622935977.6769729-CDS-E-siliculosus-1a_M_contig71:841222..8415941622935977.6769729-CDS-E-siliculosus-1a_M_contig71:841222..841594Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig71 841223..841594 +
1696250874.2536366-CDS-E-siliculosus-1a_M_contig71:841222..8415941696250874.2536366-CDS-E-siliculosus-1a_M_contig71:841222..841594Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig71 841223..841594 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig71.15332.1

>prot_E-siliculosus-1a_M_contig71.15332.1 ID=prot_E-siliculosus-1a_M_contig71.15332.1|Name=mRNA_E-siliculosus-1a_M_contig71.15332.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=150bp
MARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRD
VKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLF
KNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQVSIH*
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mRNA from alignment at E-siliculosus-1a_M_contig71:838888..841644+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig71.15332.1 ID=mRNA_E-siliculosus-1a_M_contig71.15332.1|Name=mRNA_E-siliculosus-1a_M_contig71.15332.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2757bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig71:838888..841644+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TCCTCAAGCAGCTTGTATTGAACAAGGACACCCGCGTGTCGGGGCATTCG CTTGCCACTGTGGCTGAATACTGGAACCTTCGAAGTGATGGAGTTCTCGA TGACGGCGAGTATCGTAAACTGGTGCTTGAGACCTTGGATTTCCTCGACG GTACGGCCTGGTCCAGATGCGGGAGCTCGTCGCTAGCCGACGCTCAACCC CGACAGGTAAAAACGCTTTGGATCAATGCTTGTATGGGCGGCTCATCTTC CTCCCAAATTCAGCTTGTGGTTTCAAATCAGTTTCTTCTCCCCTCCGTTC GTGCGCATCGTTGTCTTGGACAGAATCCAGCCATCCGTCCCTTTGTTCGT CGATTTTGTTCAGAGAAAATGCTCTCCCCCTCGAGCACGGCCGCTATAAC TGATCGATTGTCGTGCGTCGTCTGGTTCACGTTGATGACGGACGGCAGGA AGGATTAAAGCCTGTTTATTGAAAAAATCGTGGGTTTGAGCAATGCCATA AACTTGGAAAGCAGGCGATTTGAACAGTGTGAATGCGTGTAGTCTCGAGT AAAAGTATCAAGCTGTTGCCGAATAAATTAACGCCGTAAAAATCATGGTG CATATGACATACTTTGTCGTGCTAAGAGGACGGCTGTTTTGTGTTTTGGT ACGGCGGTAACTCAAATAGAAAAAACCACACCGCTCCGCTCCGTGACGTT TCAAAAGACTCCGTGCAGAGCCCTGGACAGGTTGGAACTGTGCTGTGAGG CCTGAAAAAATTCTCTCACCGCTAAAGCGAACTTTGTTGACAGTGAATTA ACGATGAGGCCAGTCGACCAAAGTTCACCAGGTGTGGGAAAGGAAAGCTC GATGTCGCGATCTGTCTATTTCCTTCGCGTCACATTATACTACATGAACA GGCCGCGAAATTCCCCGTGCAGCCCTGAAAGTTGATAAATTAGCCGAGAT AGTCAGTGCAAGATCTTGTTCCTCTTGGCTCGATCGCTCATTCGAGCTGT CCCGCGACCCATCAACTGAGTTGAACTTGGAAGCCCACAGAAGTCGTCAT GGGTCTGCTGAACTCTCTCAATGGAACGAAGGCCTACGCTCTTCAAGAAC GAGATTCTCCCTGTCAAAATGTTTCTGGATAGAGCCGAGCCGACATGCTG CGGGAAAAATATGTGAATACATGAAATACGGTCGAGGTCGTCTCAATGGC GTTGTGGGATTTGTATTCCCAGGAATGAGAGTAACCTCACTGTAGGTTAT CGATATCGCCTATGCGAACTCACCTCCCAAACCACGAGGTGGGATGTCCC GGCTTTGGGACAGATCGCTGTTCTCAATAGAATTGGACGCATTGCTTTTC TCAACGAAAGGTGCACCGAATGGAATACATGCGTGGATCTCCTGTAGTTT CTACACCCTTGGAGCGTAGATCATTAATGCCACTCAAAGTTGTTTCCTCG CGTGTTCTTTGTCGACAGATCGAGAAGACACGCCTGAACATCAAAGAACT CTTGGAGGTCGAGCACGAGCTGAGCACCGACCATAGCGCGAAGACGAATC TTCTAAAGTACCTTCAAGTCGAGGCCGTGCAGGGTTTCCAGCAGATCGCC GACGCGCTCTACTTCACGCTCAGACACGATGAGGACTTCGACGAGCTGGA AAGGATCAAGAGTGCGAACAATGGGGCGACCCTCGAACAGCCGAGACTAA AGGGGACCATCGAAGACTACCTGCGAGACGCTGGGGTTGCGAAGTGCTCG CTCGACGCGCTAGTGGGGGGCATCGCTCGCGAATGTGCCGCACGGGTGTA CACAACGAATGTGAAGTCTTTCGAAAGCACCAAGCGCAAGGTAGAGGTTC GAGGAAGCATTCGCAAGGTGACGGACATGGCTCGAATATCCGTGGTCTGC GATACGATCAAGAGCATGGTGGATCTCTTCGAACTTCTCGACGCCAAGAT TCAGGTGGGCACTCTTGTTTTGGTTTGGCCATGGAACAGACTGCCAAAGT CACGGTTCTCTCAAACATAGTACCCTTGATGGGACGAAAACCTCGGAAAT CAAATTTGCCTTGGCCGGCGAACAGAGGACGTTTGTATGAGCAAACATGG AACCGTTCACCACCTGAGTTTGCTGTCTGTGTGGCGTGGGGTGCCCTCAC CTTAATTTTTTCATACTTGAAACACGGCCGGAGAATGATCTACATGTACG AATACTTGCTGTCGGCAAAAGCTTTCGTTGTTCCGCAAGACAGCCTCGCG TTTTGGCCGTGTCCAAGTTCCATCAGTCGTCCAGTGTGATTCAAAAAGTT GACTTCCCTGGTAAAAACCTTCTGTTGCATTGCAGGACAAAGGCGGGGTC GTCCTTGGGGTGAGGAACGGCTTCCTCGCCCACTACGGCAGCAATGGGTA CAGGGATGTGAAGCTGGATGTCCTACTGGAGAATCACGTTTGCGAGATTC AGCTGCACTTTCCCCCTTTCTACGACCTGAGGGACGGCCAGCACAAAGTC TACGAATGGTCCAGGCGTTTGAATGTCACGGTAGAAATGAGACCTGACCA TCTTTTCAAGAACACTAGCAAGGCCATTCTTGCACGGATGATAAGCCTTG CTCGAGGCGACTGGTGCGCAACCCGCGAAACCTTGCCTGCCCTTTTGCAC GCCGCCGGAGAGTATGACCAATCCGCGGAGCTGCTTCGACAAGTGAGTAT ACACTGAGCGCAACTAAATAAGCTACTAAAGTGCAGATCTCGGTCTCCTT ATCGTCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig71:838888..841644+

>mRNA_E-siliculosus-1a_M_contig71.15332.1 ID=mRNA_E-siliculosus-1a_M_contig71.15332.1|Name=mRNA_E-siliculosus-1a_M_contig71.15332.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=900bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig71:838888..841644+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCTCGAATATCCGTGGTCTGCGATACGATCAAGAGCATGGTGGATCT
CTTCGAACTTCTCGACGCCAAGATTCAGATGGCTCGAATATCCGTGGTCT
GCGATACGATCAAGAGCATGGTGGATCTCTTCGAACTTCTCGACGCCAAG
ATTCAGGACAAAGGCGGGGTCGTCCTTGGGGTGAGGAACGGCTTCCTCGC
CCACTACGGCAGCAATGGGTACAGGGATGTGAAGCTGGATGTCCTACTGG
AGAATCACGTTTGCGAGATTCAGCTGCACTTTCCCCCTTTCTACGACCTG
AGGGACGGCCAGCACAAAGTCTACGAATGGTCCAGGCGTTTGAATGTCAC
GGTAGAAATGAGACCTGACCATCTTTTCAAGAACACTAGCAAGGCCATTC
TTGCACGGATGATAAGCCTTGCTCGAGGCGACTGGTGCGCAACCCGCGAA
ACCTTGCCTGCCCTTTTGCACGCCGCCGGAGAGTATGACCAATCCGCGGA
GCTGCTTCGACAAGTGAGTATACACTGAGACAAAGGCGGGGTCGTCCTTG
GGGTGAGGAACGGCTTCCTCGCCCACTACGGCAGCAATGGGTACAGGGAT
GTGAAGCTGGATGTCCTACTGGAGAATCACGTTTGCGAGATTCAGCTGCA
CTTTCCCCCTTTCTACGACCTGAGGGACGGCCAGCACAAAGTCTACGAAT
GGTCCAGGCGTTTGAATGTCACGGTAGAAATGAGACCTGACCATCTTTTC
AAGAACACTAGCAAGGCCATTCTTGCACGGATGATAAGCCTTGCTCGAGG
CGACTGGTGCGCAACCCGCGAAACCTTGCCTGCCCTTTTGCACGCCGCCG
GAGAGTATGACCAATCCGCGGAGCTGCTTCGACAAGTGAGTATACACTGA
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