mRNA_E-siliculosus-1a_M_contig71.15332.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5KNC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNC4_9PHAE) HSP 1 Score: 259 bits (661), Expect = 4.970e-75 Identity = 143/304 (47.04%), Postives = 193/304 (63.49%), Query Frame = 3
Query: 174 SSSLADAQPRQIEKTRLNIKELLEVEHEL-----STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLEQPRLKGTIEDYLRDAGVAKCSLDALVGGIA------RECAARVYTTNVKSFESTKRKVEVRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKI-QDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQ 1049
S S D ++++ T +IK +L++ +L S + SAK NL+ YLQV+AV+ +++I+ LYF LR DE FDEL RI L QP G+ EDYL A AK LD L+ +A RE V +VK+ +ST RK G IR VTD+AR +V+CDT + + +FE L K+ Q GG VL V NGF+ +YG NGYRDVK+ V++ H+CEIQLH PF+ L+DGQH++YEWSR L VT +MRP HLFKN +L RM L+R DWC+T+ L +LLH AG Y+++ EL+RQ
Sbjct: 133 SPSARDDLGKRMDPTGSDIKNILQLASDLKELPDSIERSAKMNLVTYLQVDAVRKYERISTGLYFDLRRDEGFDELLRIHEKQPEGDLVQPMETGSFEDYLLQAEHAKLCLDGLLESVAPLGTPGRE----VILADVKTLKSTTRKANNWGGIRYVTDLARGTVICDTPRDVAQVFEALTLKVGQVPGGNVLRVSNGFIRNYGRNGYRDVKMFVIIAEHICEIQLHLRPFHCLKDGQHEIYEWSRALRVTADMRPSHLFKNMEPGMLERMTQLSRDDWCSTKRALSSLLHTAGHYEEARELMRQ 432
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: D8LH34_ECTSI (Peptidase-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH34_ECTSI) HSP 1 Score: 231 bits (588), Expect = 1.110e-64 Identity = 137/284 (48.24%), Postives = 173/284 (60.92%), Query Frame = 3
Query: 225 NIKELLEVEHELST-----DHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANN-GATLEQPRLKGTIEDYLRDAGVAKCSLDALVGGIARECAARV--YTTNVKSFESTKRKVEVRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
NI+ELL++E EL+T + SAK NLLK+LQV AV +++++ ALYF LR D F EL + N+ G T QP G+IEDYL A AK LD L+ IA R +KS ES RK + G+ R VTD AR + VC T +V++ LL I + + L V NGFL +YG NGYRDVK+ VLL H CEIQLH FY L+DGQH+VYEWSR L VT E+RP+HLFK IL MI LA DW +T L LLH AG+Y ++ +L Q+
Sbjct: 7 NIRELLQLEEELNTLPCSIERSAKVNLLKFLQVNAVVEYERVSTALYFDLRRDAGFHELSLVPEKNHLGHTCSQPMEAGSIEDYLVQAEEAKACLDRLIYSIATPGDPRWEGIPAPIKSKESASRKADKLGNARFVTDFARATFVCKTPHDLVEVIALLTDGIGQEDNL-LRVSNGFLRNYGRNGYRDVKMIVLLAGHACEIQLHLRSFYGLKDGQHEVYEWSRTLKVTAEIRPEHLFKGMQPEILELMIQLAAADWHSTNLALVPLLHRAGKYAEARDLQLQI 289
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5JHK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK0_9PHAE) HSP 1 Score: 182 bits (461), Expect = 4.790e-51 Identity = 122/302 (40.40%), Postives = 164/302 (54.30%), Query Frame = 3
Query: 222 LNIKELLEVEHELST---------DHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATL-----------EQPRLKGTIEDYLRDAGVAKCSLDALVGGIAR---ECAARVYTTNVKSFESTKRKVEVR--GSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
++I ELL +E EL D AK NLLK+LQ+ AV +++ D LY+ L + L I A L E R +E YL DA +AK LD LV IA+ EC V+ VKS ST+RK G +RKV DMAR+SV+CD +++ + + Q G VL V NGF + + +GYRDVK++ +++ H+CEIQLH F+ L+ GQH VYEW+R L VT MR ++LF+ S+ I MI LA +W T LP L AAG+YDQ+ E RQV
Sbjct: 3 VDIAELLRLEAELENSCEDCRNPYDRDAKLNLLKFLQIRAVLQYEEAYDRLYYELNKHGGLECLREIAPARLKDLLQPKVLELQDCNEDVRFAAQLEFYLADAELAKNRLDELVADIAKHTGEC--EVHCAEVKSRASTQRKASKSYGGDVRKVADMARVSVICDNPEALKRAYLAIVESFQ---GDVLRVANGFNSDWMPSGYRDVKVNPVVDEHLCEIQLHLREFFTLKGGQHAVYEWARDLKVTTIMRAENLFEFLSREITEEMIGLAERNWHGTGRFLPRLQLAAGQYDQAEEGFRQV 299
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE) HSP 1 Score: 178 bits (451), Expect = 2.460e-48 Identity = 115/301 (38.21%), Postives = 173/301 (57.48%), Query Frame = 3
Query: 222 LNIKELLEVEHELSTD---------HSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLEQPR------------LKGTIEDYLRDAGVAKCSLDALVGGIARECAA-RVYTTNVKSFESTKRKVE--VRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
++I+ELL +E+EL AK N+LK LQV+ V FQ D LY+ L + + L I A + + QP+ L+ ++ YL DA +AK LD L+ +A + + +V +VKS+EST+RK G +RKV DMAR++V+C T +++ + + + + VL V+NGF + + +GYRDVKL+ ++ +H+CEIQLH F+ L+ GQH VYEW+R LNVT EMR + LFKN S ++ M+ LA +W T LP L AAG+YD++ E R++
Sbjct: 3 VDIEELLRLENELKASCERETSPATPDAKMNILKCLQVQTVVQFQLAYDDLYYELNKEGGLECLRSIAPARSTGIV-QPKVLDPQNCDEGGQLENQLQFYLADAELAKPHLDELITKVAHDSSKYKVQCADVKSWESTRRKASNSCGGDVRKVADMARVAVICATPEALKEAYLAIMGLPEAN---VLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVSPEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDRAEESHREL 299
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: D7FTB3_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB3_ECTSI) HSP 1 Score: 184 bits (466), Expect = 8.040e-48 Identity = 116/300 (38.67%), Postives = 169/300 (56.33%), Query Frame = 3
Query: 222 LNIKELLEVEHEL----------STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATL-----------EQPRLKGTIEDYLRDAGVAKCSLDALVGGIARECAA-RVYTTNVKSFESTKRKVE--VRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQ 1049
++IKE+L +E EL S AKTNLLKY+QV V GF++ D L++ L + + L I A + E RL+ ++ YL DAG+AK LD LV +A++ + VKS EST+RK G +RK+TDMAR++V+C+T +++ F + +Q + VL V NGF + + +GYRDVK++ ++ H+CEIQL F L+ QH VYEW+R LNVT EM P+ +F+N S ++ M+ LA DW TR L L AAG+Y Q+ + L+Q
Sbjct: 46 IDIKEVLRLEDELKKTLRESPTSSIRLDAKTNLLKYVQVNTVLGFEEAYDDLFYELNENGGLECLRSIAPARSKDRFQPKISELQDCDEGDRLEQQLQFYLTDAGLAKPFLDVLVASVAQDSTKYEIQRVGVKSRESTRRKAIKFCGGDVRKITDMARVTVICETPEALEQAFSAILGSLQPQD--VLRVANGFNSDWMPSGYRDVKVNAVVHEHLCEIQLQLREFVALKSDQHAVYEWARDLNVTSEMEPEDMFENISPEVVEEMMHLATEDWHGTRPCLEHLQLAAGQYAQAEKGLKQ 343
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5KKK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK7_9PHAE) HSP 1 Score: 181 bits (460), Expect = 1.120e-47 Identity = 113/284 (39.79%), Postives = 164/284 (57.75%), Query Frame = 3
Query: 225 NIKELLEVEHEL-----STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIK-SANNGATLEQPRLKGTIEDYLRDAGVAKCSLDALVGGIAREC-AARVYTTNVKSFESTKRKVE-VRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
NI+ELLE+E E+ S D AK NLLKYLQV+ VQ +Q D LYFTL + + L R +A +EQP+ G +++YL DA A+ LD L+ + C KS +S RK E G++ K+ DMAR +VVC T + + + ++ A++ + VL V+NGF + + +GYRDVK++ ++ H+CEIQLH F++L+DGQH VYEW+R L VT E P +LF + S L MI LA +W LP+L G+Y ++ E R++
Sbjct: 10 NIQELLELEKEIRSKIPSLDRDAKVNLLKYLQVQRVQEYQVEYDRLYFTLSRGGNLEGLRRKNMAAARLKPVEQPKKLG-LQEYLADAQEAQPHLDKLIEDVVATCDGCEGRFVGTKSPDSVMRKAERFNGNVGKIADMARAAVVCGTPEDLERAYTVIMARLNPQD--VLRVKNGFSSDWMPSGYRDVKVNPVVCGHLCEIQLHLREFFELKDGQHTVYEWARELRVTTETDPRYLFDDLSSETLEEMIRLAEVNWAGAEHVLPSLQLYMGKYVEAEEAFRKL 290
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: D7FY64_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY64_ECTSI) HSP 1 Score: 175 bits (444), Expect = 4.820e-46 Identity = 117/296 (39.53%), Postives = 164/296 (55.41%), Query Frame = 3
Query: 222 LNIKELLEVEHEL-----STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLEQPR------------LKGTIEDYLRDAGVAKCSLDALVGGIARECAARV-YTTNVKSFESTKRKV--EVRGSIRKVTDMARISVVCDTIKSMV----DLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAE 1037
L+I ELL++E EL S + AK NLLK+LQV+ V+ +++ D+LY+ L D + L RI+ N ++L QP L ++ Y A AK LD LV + R VKS EST+RK G +R++ DMAR+SV+CDT + + DL E ++ V VRNGF + + +GYRDVK++ ++ H+CEIQL F+ L+DGQH+VYEW+R L V+ EM DHLFK S I M+ LA+ +W TR LP LL A +Y Q+ E
Sbjct: 5 LDINELLQMEIELEGSDLSLERDAKVNLLKFLQVKTVKKYERAYDSLYYELNMDGGLECLHRIEELNPKSSLFQPEGLEPQGCDADENLGKQLDFYREGALRAKVQLDKLVRELVNGHQGRTGLYAEVKSLESTRRKATKSYGGDVRRLADMARVSVICDTPEDLELACKDLMESVEPHH------VKRVRNGFNSGWKPSGYRDVKVNTVVSGHLCEIQLQLGSFFKLKDGQHEVYEWARELKVSTEMDADHLFKMWSPGITEEMVRLAQQNWRRTRFYLPDLLADAAQYVQAEE 294
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE) HSP 1 Score: 177 bits (448), Expect = 1.270e-45 Identity = 115/300 (38.33%), Postives = 166/300 (55.33%), Query Frame = 3
Query: 222 LNIKELLEVEHELSTDHS---------AKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLEQPR------------LKGTIEDYLRDAGVAKCSLDALVGGIARECAA-RVYTTNVKSFESTKRKVEVR--GSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQ 1049
++I ELL +E EL + + AK NLLKYLQ++ V FQ D +Y+ L D L I + QP+ L+ +E YL DA +AK LD LV +A + + V +KS EST+RK G +RKV DMAR++V+C T +++ + + L ++ + VL V+NGF + + +GYRDVKL+ ++ +H+CEIQLH F++L+ GQH VYEW+R LNVT +MR LFKN S + MI LA +W T LP + AG+YD + + RQ
Sbjct: 4 VDISELLRLEAELKSSRARETWTVSLDAKVNLLKYLQIQTVLQFQAAYDDMYYELHQTGGLDCLRSIAPVRSTGVF-QPKVLDLQDCGQDDQLEKQLEFYLADAELAKACLDELVMNVAHDSSKYEVQCVEIKSRESTRRKASTGYDGDVRKVADMARVTVICATPEALKEAY-LAIMELPE----VLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLRGFFELKGGQHAVYEWARELNVTTDMRSKDLFKNLSPEVSEEMIRLAGQNWAGTAYVLPDVQLDAGQYDLAEKSHRQ 297
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: A0A6H5JK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK27_9PHAE) HSP 1 Score: 176 bits (447), Expect = 3.100e-45 Identity = 105/270 (38.89%), Postives = 153/270 (56.67%), Query Frame = 3
Query: 288 LLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATLE------------QPRLKGTIEDYLRDAGVAKCSLDALVGGIAREC-AARVYTTNVKSFESTKRKVE--VRGSIRKVTDMARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQV 1052
+LKYLQV+ V ++ DALY+ L + + L I + G L+ RL + YL DA +AK LD LV A V+ VKS EST+RK G +RKV DMAR++V+CDT +++ +F + +Q + VL V+NGF + + GYRDVK++ ++ H+CEIQL F+ L+ GQH VY W+R LNV +M+ LFKN S+ ++ MI LAR +WC T LP + AAG+Y+++ + LRQ+
Sbjct: 1 MLKYLQVQTVLQYEAAYDALYYELNKEGGLECLRNIAPVDTGDPLQPKVLNLQDYSNADDRLAKQLRFYLADAELAKKRLDELVTNAAEGLETCNVHCVVVKSLESTRRKASQFCGGDVRKVADMARVTVICDTPEALKQVFSKIMGLLQPQD--VLRVKNGFDSDWTPGGYRDVKVNPVVNEHLCEIQLQLRNFFTLKSGQHAVYTWARDLNVVTKMQATDLFKNVSRLVMEEMIHLARQNWCGTWHWLPEIQLAAGQYEEAEKGLRQL 268
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI) HSP 1 Score: 174 bits (442), Expect = 7.090e-45 Identity = 115/300 (38.33%), Postives = 165/300 (55.00%), Query Frame = 3
Query: 222 LNIKELLEVEHEL---------STDHSAKTNLLKYLQVEAVQGFQQIADALYFTLRHDEDFDELERIKSANNGATL-----------EQPRLKGTIEDYLRDAGVAKCSLDALVGGIARECAA-RVYTTNVKSFESTKRKVE--VRGSIRKVTDMARISVVCDTIKSMVDLF-ELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDVKLDVLLENHVCEIQLHFPPFYDLRDGQHKVYEWSRRLNVTVEMRPDHLFKNTSKAILARMISLARGDWCATRETLPALLHAAGEYDQSAELLRQ 1049
++I +LL +E EL ST AK NLLKYLQV+ V FQ D LY+ L D L I + E +L+ ++ YL DA +AK LD LV +A + + V +VKS EST+RK G +RKV D+AR++V+C T +++ + + +++ Q VL ++NGF + + +GYRDVKL+ ++ H+CEIQLH F+ L+ GQH VYEW+R LNVT +MR + LF+ S + M+ LA +W T LP L AAGEYD + + RQ
Sbjct: 4 VDINDLLRLEAELKTSRERETSSTSLDAKVNLLKYLQVQTVLQFQAAYDDLYYELSKTGGLDCLRTIAPVPSTGVFQPKVFDPQDCGEDEQLENQLQFYLADAELAKAHLDELVMNVAHDMSKYEVQFVDVKSRESTRRKASRFCDGDVRKVADIARVTVICTTPEALKEAYLAIMELPTQQ----VLLIKNGFKSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHAVYEWARDLNVTTDMRCEDLFETLSAKVTKEMLHLAGENWRGTGYVLPDLQLAAGEYDLAEKSQRQ 299 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig71.15332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig71.15332.1 >prot_E-siliculosus-1a_M_contig71.15332.1 ID=prot_E-siliculosus-1a_M_contig71.15332.1|Name=mRNA_E-siliculosus-1a_M_contig71.15332.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=150bp MARISVVCDTIKSMVDLFELLDAKIQDKGGVVLGVRNGFLAHYGSNGYRDback to top mRNA from alignment at E-siliculosus-1a_M_contig71:838888..841644+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig71.15332.1 ID=mRNA_E-siliculosus-1a_M_contig71.15332.1|Name=mRNA_E-siliculosus-1a_M_contig71.15332.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2757bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig71:838888..841644+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig71:838888..841644+ >mRNA_E-siliculosus-1a_M_contig71.15332.1 ID=mRNA_E-siliculosus-1a_M_contig71.15332.1|Name=mRNA_E-siliculosus-1a_M_contig71.15332.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=900bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig71:838888..841644+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |