mRNA_E-siliculosus-1a_M_contig71.15318.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: D8LDQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ8_ECTSI) HSP 1 Score: 556 bits (1432), Expect = 3.630e-196 Identity = 267/281 (95.02%), Postives = 270/281 (96.09%), Query Frame = 1
Query: 676 RWFVYHISVVDALSSCHCLLSCLQEIRAWSDLNPMHHVIFMDIEMKLTGDFLRICGDHTPDQDRTAFRSLQDTILEAFPPERLVTPSMVQGDYDSLFEAVNAGGSCVGGRCG-------EGGGVPGVAGGWPLVDDTRGMILFVMDYQTVNLRCRDGVRKALPVGETVFFERIPKREVRDNVPYAAFTQTCQCGKIWEHVTTTWANRGLMIRQDPRESWVVPGADGLTPPSLGTGNETYLAETAAQLLVSDDVTRGVAKGVCRSRCSPMVPAEECVLEGFC 1497
RWFVYHISVVDALSSCHCLLSCL+EIRAWSDLNPMHHVIFMDIEMKLTGDFLRICGDHTPDQDR AFRSLQDTILEAFPPERLVTPSMVQGDY+SLFEAVNAGGSCVGGRCG EGG +PGVAGGWPLVDDTRGMILFVMDYQTVNLRCRDGVRKALPVGETVFFERIPKREVRDNVPYAAFTQTCQCGKIWEHVTTTWANRGLMIRQDPRESWVVP ADGLTPPSLGTGNETYLAETAAQLLVSDDVTRGVAKGVCRSRCSPMVP EECVLEGFC
Sbjct: 9 RWFVYHISVVDALSSCHCLLSCLEEIRAWSDLNPMHHVIFMDIEMKLTGDFLRICGDHTPDQDRVAFRSLQDTILEAFPPERLVTPSMVQGDYNSLFEAVNAGGSCVGGRCGSNGGSSGEGGAIPGVAGGWPLVDDTRGMILFVMDYQTVNLRCRDGVRKALPVGETVFFERIPKREVRDNVPYAAFTQTCQCGKIWEHVTTTWANRGLMIRQDPRESWVVPAADGLTPPSLGTGNETYLAETAAQLLVSDDVTRGVAKGVCRSRCSPMVPTEECVLEGFC 289
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: A0A6H5L092_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L092_9PHAE) HSP 1 Score: 356 bits (914), Expect = 6.080e-114 Identity = 204/415 (49.16%), Postives = 264/415 (63.61%), Query Frame = 1
Query: 343 LALLVAYWSLVPMCTTCGVGVSGTLSSSSSAAGGVEVASMEGTSVGYDVQPFSTLHINQLQVYGTHNSYHRRTNIPGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGRWFVYHISVVDALSSCHCLLSCLQEIRAWSDLNPMHHVIFMDIEMKLTGDFLRICGDHTPDQDRTAFRSLQDTILEAFPPERLVTPSMVQGDYDSLFEAVNAGGSC-----------VGGRCGEGGGVP--GVAGGWPLVDDTRGMILFVMDYQTVNLRCRDGVRKALPVGETVFFERIPKREVRDNVPYAAFTQTCQCGKIWEHVTTTWANRGLMIRQD-PRESWVVPGADGLTPPSLGTGNE---TYLAETAAQLLVSDD---VTRGVAK-----GV-----CRSRCSPMVPAEECVLEGFC 1497
LA+ + +W+L P+ T+C V SG LSSS V A +GT STL+INQLQV GTHNSYHRRT +P L +W Y++PS+ AQLDAG+RHLELD HYDWKTGRWFV+H+S++DA+SSC+CL CL EIR WSD +P HH++F++IE KLTGDFL++CG+ TP D TAFR++Q+T+++ FP +R++TP V+GDY++L EAV A S GGV G AGGWPLVD+TRG +LF++DYQT N+ CR VRKALP ETVFFER P E+ + F +T G I V + G+++R P W D + S G+E TY+ +T AQL+V DD V G A+ GV CRSRCS +VP E+CVLEGFC
Sbjct: 164 LAVAIFFWALSPVRTSC-VRSSGQLSSSV-----VPAADEQGT---------STLYINQLQVIGTHNSYHRRTFVPALSDYWDYQYPSLTAQLDAGIRHLELDTHYDWKTGRWFVFHLSILDAVSSCNCLSVCLAEIREWSDTHPTHHILFIEIEFKLTGDFLQLCGEKTPGADHTAFRAMQETVIDEFPLDRILTPREVRGDYETLAEAVTATTSASELFVPTTTSSASAESSGSGGVAREGTAGGWPLVDETRGKVLFIIDYQTTNILCRPSVRKALPKDETVFFERTPLTEIGHS-DLLTFVETRNSGMIDGMVRS-----GIIVRNRIPNHDW-----DSRSD-SEEDGDEPRLTYVVDTPAQLVVYDDLRVVQHGNAQQEEKDGVVTPLRCRSRCSAIVPEEQCVLEGFC 551
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: D8LDQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ3_ECTSI) HSP 1 Score: 338 bits (868), Expect = 1.030e-106 Identity = 183/374 (48.93%), Postives = 242/374 (64.71%), Query Frame = 1
Query: 343 LALLVAYWSLVPMCTTCGVGVSGTLSSSSSAAGGVEVASMEGTSVGYDVQPFSTLHINQLQVYGTHNSYHRRTNIPGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGRWFVYHISVVDALSSCHCLLSCLQEIRAWSDLNPMHHVIFMDIEMKLTGDFLRICGDHTPDQDRTAFRSLQDTILEAFPPERLVTPSMVQGDYDSLFEAVNAGGSC-----------VGGRCGEGGGVP--GVAGGWPLVDDTRGMILFVMDYQTVNLRCRDGVRKALPVGETVFFERIPKREVRDNVPYAAFTQTCQCGKIWEHVTTTWANRGLMIRQD-PRESWVVPG---ADGLTPPSLGTGNETYLAETAAQLLVSDDV 1413
LA+ + +W+L P+CT+C V SG L SS V A +GT STL+INQLQV GTHNSYHRRT +P L +W Y +PS+ AQLDAG+RHLELD+HYDWKTGRWFV+H+S++DA+SSC+CL CL E+R WSD +P HH++F++IE+KLTGDFL++CG+ TPD D TAFR++Q+T+++ FP +R++TP V+GDY++L EAV A S GGV G+AGGWPLVD+TRG +LF++DYQT N+ CR VRKALP ETVFFER P E+ + AF +T G I V + G+++R P W DG P TY+ +T AQL+V DD+
Sbjct: 165 LAVAIFFWALSPVCTSC-VRSSGQLPSSV-----VPAADEQGT---------STLYINQLQVIGTHNSYHRRTYVPALSDYWDYHYPSLTAQLDAGIRHLELDIHYDWKTGRWFVFHLSILDAVSSCNCLSVCLAEVREWSDTHPTHHILFIEIELKLTGDFLQLCGEKTPDADHTAFRAMQETVIDEFPLDRILTPREVRGDYETLTEAVTATTSASELFVPTTISSTSAESSGSGGVAREGMAGGWPLVDETRGKVLFIVDYQTTNILCRPSVRKALPKDETVFFERTPLTEISHS-DLLAFGETRNSGVIEGMVRS-----GIIVRNRIPNHDWDSRSDSEEDGEEP------RLTYIVDTPAQLVVYDDL 511
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: A0A6H5KYL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYL9_9PHAE) HSP 1 Score: 123 bits (308), Expect = 8.640e-30 Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 1
Query: 514 NQLQVYGTHNSYHRRTNIPGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGR 678
N L+VYGTHNSYHRRTNIPGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGR
Sbjct: 83 NPLKVYGTHNSYHRRTNIPGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGR 137
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: UPI001CFCA1A7 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFCA1A7) HSP 1 Score: 123 bits (309), Expect = 2.320e-26 Identity = 80/231 (34.63%), Postives = 110/231 (47.62%), Query Frame = 1
Query: 514 NQLQVYGTHNSYHRRTNI-PGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGRWFVYHISVVDALSSCHCLLSCLQEIRAW-------------------SDLNPMHHVIFMDI-----EMKLTGDFLRICGDHTPDQDRTAFRSLQDTILEAFPPERLVTPSMVQGDYDSLFEAVNAGGSCVGGRCGEGGGVPGVAGGWPLVDDTRGMILFVMDYQTVNLRCRDGVR 1131
NQL THNSYHR+ L + YE I QL VR LELDVH++ +TGR+ VYHI V+D SSC C LSCL I+ W + +H I DI E K + D + CG++ P + F L + IL FP R++TP+ ++G+Y ++ EA+N GWPL D RGM++FV++ N C +R
Sbjct: 281 NQLSRLMTHNSYHRKKMFFSSLISQFNYEHDEIETQLQNHVRGLELDVHFNKRTGRFQVYHIPVLDDHSSCDCFLSCLLLIKRWMKREEENSAATRSISNSRAQSTSSNNHPILPDILTIYIEPKYSRDVYQFCGENVP----SVFPDLINEILRVFPLHRILTPAKLKGNYTTVREAINDR-------------------GWPLRDSIRGMVMFVVNLWDENKDCTAKIR 488
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: A0A7C4V381_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C4V381_9BACT) HSP 1 Score: 117 bits (294), Expect = 1.070e-25 Identity = 82/278 (29.50%), Postives = 123/278 (44.24%), Query Frame = 1
Query: 493 PFSTLHINQLQVYGTHNSYHRRT-------NIPGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGR-WFVYHISVVDALSSCHCLLSCLQEIRAWSDLNPMHHVIFMDIEMKLTGDFLRICGDHTPDQDRTAFRSLQDTILEAFPPERLVTPSMVQGDYDSLFEAVNAGGSCVGGRCGEGGGVPGVAGGWPLVDDTRGMILFVMDYQTVNLRCRDGVRKALPVGETVFFERIPKREVR----DNVPYAAFTQTCQCGKIWEHVTTTWANRGLMIR 1290
P + +NQ+QV GTHNSYH+R I K W YE + AQLD GVR ELD+H +T W V H+ D+ S+CH C+ I+ WS +P H I + +E K G + D+ +L + I + F ERL+ P MV+G++++L EA+ + GWP +D+ RG ++FV R +RK ++ E P E R ++ P +F +E W G ++R
Sbjct: 22 PAESPKMNQIQVIGTHNSYHKRPVHLEIAMKINEKAKDWDYEHLPLDAQLDRGVRSFELDIH---RTSEGWKVMHVPHFDSESTCHTFQECIDIIKQWSIHHPYHVPIIILVEWKREGP---VIDKSIKVPDKNDLDNLDEIIFDVFTKERLIIPDMVRGEFNTLEEAI-------------------LKKGWPSLDEVRGKVMFVFHN-------RGELRK-------LYLEGYPNLEGRAMFVNSRPGESFAGVLIIDNPFEEKIPQWVKMGYIVR 260
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: A0A841K3A2_9BACT (Uncharacterized protein n=1 Tax=Silvibacterium bohemicum TaxID=1577686 RepID=A0A841K3A2_9BACT) HSP 1 Score: 117 bits (294), Expect = 2.660e-25 Identity = 107/381 (28.08%), Postives = 153/381 (40.16%), Query Frame = 1
Query: 487 VQPFSTLHINQLQVYGTHNSYH-----------RRTNIPGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGRWF-------------------------------VYHISVVDALSSCHCLLSCLQEIRAWSDLNPMHHVIFMDIEMKLTGDFLRICGDHTPDQDRTAFRSLQDTILEAFPPERLVTPSMVQGDYDSLFEAVNAGGSCVGGRCGEGGGVPGVAGGWPLVDDTRGMILFVMDYQTVNLRCRDGVRKALPVGETVFFERIPKREVRDNVPYAAFTQTCQCGKIWEHVTTTWANRGLMIR-------QDPRESWVVPGADGLTPPSLGTGNETYLAETAAQLLVSDDVTRGVAKGVCRSRCSPMVPAEECV 1482
VQ +HINQ+QV G+HNSYH + N + Y P + QL GVR LE+DV+ D K GR+ V H+ D SSCH ++CL IR WS +P H IF+ +E K + D F +L I F ++TP V+G YDSL EA+ A G G+ AGGWP + RG ++F+MD + V +G AL G +F +P+ P AAF + K E + T A G +IR ++ R + L+ + + AE A S + GV +RC+P+ +C+
Sbjct: 32 VQQDQRVHINQIQVIGSHNSYHTGVAPSERKLIEQQNAKAMHDL-DYAHPPLSDQLSGGVRQLEIDVYADSKGGRYSHPAIVDKVAQAGLPPDPDFDPNHEMDKPGFKVMHVMNFDQRSSCHTFIACLTIIRGWSQQHPHHLPIFILVETKQGRPNAPVNPDGPEPFTPATFDALDAEIRSVFQDSEMITPDEVRGSYDSLPEAIQATGKSASGK----------AGGWPTLARARGKVVFLMDQKPVTPIYTEG-HTALR-GRVIFTNAVPE------APDAAFIEVNTPDK--EQIDTL-AREGYLIRTRTDDGTEEARNNDYTRAKIALSSGAQILSTDYPPAEPAKWTGFSITLPHGVI-----ARCNPVTAPSDCI 385
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: UPI00195A3DEA (phosphatidylinositol-specific phospholipase C1-like protein n=1 Tax=Dyella kyungheensis TaxID=1242174 RepID=UPI00195A3DEA) HSP 1 Score: 117 bits (293), Expect = 2.770e-25 Identity = 110/384 (28.65%), Postives = 157/384 (40.89%), Query Frame = 1
Query: 505 LHINQLQVYGTHNSYHR----------RTNIPGLGKFWKYEFPSIPAQLDAGVRHLELDVHYDWKTGRWF-------------------------------VYHISVVDALSSCHCLLSCLQEIRAWSDLNPMHHVIFMDIEMKLTGDFLRICGDHTPDQDRTA-FRSLQDTILEAFPPERLVTPSMVQGDYDSLFEAVNAGGSCVGGRCGEGGGVPGVAGGWPLVDDTRGMILFVMDYQTVNLRCRDGVRKALPV---GETVFFERIPKREVRDNVPYAAFTQT--CQCGKIWEHVTTTWANRGLMIR---QDPRESWVVPGADGLTPPSLGTGNETYLAETAAQLLVSDDVTR---------GVAKGVCRSRCSPMVPAEEC 1479
L INQ+QV GTHNSYH + P Y P++ QLD GVR +ELDV D K G++ V HI +D S+C +CL E+RAWS +P H IF+ +E K G TPD A F +L I F P+ ++TP V+G + +L EAV G GWP + RG ++F++D RKA PV G V +R+ P AAFT+ C +I E V +RG ++R DP + G + GT + + + AQ++ +D G+ GV +RC+P++ A+ C
Sbjct: 29 LRINQIQVIGTHNSYHMGFAPSATRLMQLEAPQALAAIDYSHPALTKQLDDGVRQIELDVFADPKGGKYAHPSISHMIDLAGLPDDPPLAAPGVFDQPGFKVMHIQDIDQRSTCQPFTACLTEVRAWSKAHPGHVPIFILVETK-EGALQAKIPSVTPDPFTPAVFDALDKEIASVFAPDEIITPDQVRGSHATLNEAVREG-------------------GWPTLTKARGKVVFLLDQ-----------RKAEPVYLEGHPVLKDRLIFTNATPGAPDAAFTECNECSAAQIDELV-----HRGYLVRTRSDDPEQ--------GQGKRNDGTRRDAII-NSGAQMISTDYPVNEPSDHGYQVGLPGGVA-ARCNPVLAADAC 366
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: A0A4U1JD73_9DELT (Uncharacterized protein n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1JD73_9DELT) HSP 1 Score: 114 bits (286), Expect = 1.590e-24 Identity = 68/208 (32.69%), Postives = 104/208 (50.00%), Query Frame = 1
Query: 481 YDVQPFSTLHINQLQVYGTHNSYHRRTNIPGLGKFWKYEFPSIPAQLDA-GVRHLELDVHYDWKTGRWFVYHISVVDALSSCHCLLSCLQEIRAWSDLNPMHHVIFMDIEMKLTGDFLRICGDHTPDQD---RTAFRSLQDTILEAFPPERLVTPSMVQGDYDSLFEAVNAGGSCVGGRCGEGGGVPGVAGGWPLVDDTRGMILFVMD 1092
+D L ++ LQ THNSYH T +G+ W+Y + QL A GVRH+ELD+ Y++ + VYH+ V+D ++C L CL+ ++ WSD + HH I + E+K D P + T F +L + IL +P +R++ P VQGD +L EAV ++ GWP + + RG +LF +D
Sbjct: 38 FDYPLDDVLRLHHLQTKSTHNSYHIETEGNTVGE-WRYTHAPLDVQLGAQGVRHVELDLRYNFDLEAFEVYHLPVLDEQTTCRKLTDCLRVLKDWSDAHRAHHPIVVQFEIK----------DAVPADEAGAETYFAALHEEILRVWPDDRILVPDEVQGDAATLREAV-------------------LSKGWPTLGEVRGHVLFTLD 215
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Match: A0A2E4FD70_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E4FD70_9DELT) HSP 1 Score: 115 bits (289), Expect = 2.000e-24 Identity = 72/202 (35.64%), Postives = 106/202 (52.48%), Query Frame = 1
Query: 502 TLHINQLQVYGTHNSYHRRTNIPGLGKFWKYEFPSIPAQLDA-GVRHLELDVHYDWKTGRWFVYHISVVDALSSCHCLLSCLQEIRAWSDLNPMHH--VIFM----DIEMKLTGDFLRICGDHTPDQDRTAFRSLQDTILEAFPPERLVTPSMVQGDYDSLFEAVNAGGSCVGGRCGEGGGVPGVAGGWPLVDDTRGMILFV 1086
+L +N +Q GTHNSYH++ P L KY PS+ QL+ GVR E D+H G+ ++HI ++D +SSC L CL+E RAWSD NP H VI+M D++ + GD++ + G + ++ TILE F P RL+TP V+G +++L A+ A GWP + RG ++FV
Sbjct: 128 SLRLNHMQALGTHNSYHQQPQAP-LHPSHKYTMPSLTDQLELHGVRQFEWDLHLHLD-GQLEIFHIPLIDQVSSCTLFLDCLEETRAWSDANPGHAPLVIWMELKDDVDTGVLGDYVPLAGHYD---------EVEATILEVFEPARLLTPDEVRGAHETLPAALEAE-------------------GWPTLGALRGRLVFV 299 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig71.15318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig71.15318.1 >prot_E-siliculosus-1a_M_contig71.15318.1 ID=prot_E-siliculosus-1a_M_contig71.15318.1|Name=mRNA_E-siliculosus-1a_M_contig71.15318.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=500bp MAPQLPISRDWGRDNEAIPLPVVISPEQPRSAELEAGTEGFSPDRLLRQAback to top mRNA from alignment at E-siliculosus-1a_M_contig71:707728..714520- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig71.15318.1 ID=mRNA_E-siliculosus-1a_M_contig71.15318.1|Name=mRNA_E-siliculosus-1a_M_contig71.15318.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6793bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig71:707728..714520- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig71:707728..714520- >mRNA_E-siliculosus-1a_M_contig71.15318.1 ID=mRNA_E-siliculosus-1a_M_contig71.15318.1|Name=mRNA_E-siliculosus-1a_M_contig71.15318.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3000bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig71:707728..714520- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |