mRNA_E-siliculosus-1a_M_contig71.15306.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig71.15306.1 vs. uniprot
Match: D7G9C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C9_ECTSI) HSP 1 Score: 446 bits (1146), Expect = 7.860e-149 Identity = 214/226 (94.69%), Postives = 219/226 (96.90%), Query Frame = 3
Query: 705 AYWSNDENIRNEVVKFWADLGVASDKVPNQTLMHFFRAHALKYGVALRGGVDDCAEWLNVEAIPGKWSLALLEREVAQLLEEGKLGSKSIASGPQGGGSELIKIATKGWPSREALEMGNRASASKHMLEKCASGYWTAGNNFEREVLAFNTNYQLEEGLPAVWMVKLIDMINNGRRDIVNAIQRAGGYDPAVERLGLVHHIEWKSFADQLETLRELKEFLTVDGAL 1382
AYWSNDENIRNEVVKFWADLGV SDK+PNQTLMHFFRAHALKYGVA+RGGVDDCAEWLNVEAIPGKWSLALLEREVAQLLEEGKLGSK +ASGPQGGGSELIKIATKGWPSREALE GNRAS SKHMLEKCASGYWT G+NF REVLAFNTNYQLEEGLPAVWMVKLIDMINNGRRDIVNAIQRAGGYDPA+ERLGLVHHIEWKSFADQLETLRELKEFLTVDG L
Sbjct: 95 AYWSNDENIRNEVVKFWADLGVTSDKIPNQTLMHFFRAHALKYGVAMRGGVDDCAEWLNVEAIPGKWSLALLEREVAQLLEEGKLGSKGVASGPQGGGSELIKIATKGWPSREALETGNRASESKHMLEKCASGYWTTGSNFVREVLAFNTNYQLEEGLPAVWMVKLIDMINNGRRDIVNAIQRAGGYDPAIERLGLVHHIEWKSFADQLETLRELKEFLTVDGVL 320
BLAST of mRNA_E-siliculosus-1a_M_contig71.15306.1 vs. uniprot
Match: A0A6H5L590_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L590_9PHAE) HSP 1 Score: 419 bits (1076), Expect = 4.450e-139 Identity = 286/316 (90.51%), Postives = 295/316 (93.35%), Query Frame = 3
Query: 30 MPSVGRKRVARPRRRPLDSSLAVAAVGALSAALTVAFTTPXXXXXXXXXXDRCPHSSSSGPRSSGSDRLRPQRQRQHHACHVSRGEPLSSPGSELPAAVLGVGGGRRRGRVRQRGSASFGNTGDRTVGDALRWAVVAPGGSRPEWYLCGSGAGEATAVADEEEIRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYWSNDENIRNEVVKFWADLGVASDKVPNQTLMHFFRAHALKYGVALRGGVDDCAEWLNVEAIPGKWSLALLEREVAQLLEEGKLGSKSIA 977
MPSVG KRVARPRRRP+DSSLAVAAVGALSAAL VAFTTP XXXXXXXXDRCPH+ S GPRSSGS+RLRPQRQRQHHACHVSRGEP SSPGSELPAAVLGVGGGRRR RVRQR SAS+GNTG RTV A RWAVVAP GSRPEWYLCGSG+GEATAVADEEE+RLE XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYWSNDEN+R EVVKFWADLGVASDK+PNQTLMHFFRAHALKYGVALRGGVDDCAEWLNVEAIPGKWSLALLEREVAQLLEEGKLGSKS+A
Sbjct: 1 MPSVG-KRVARPRRRPIDSSLAVAAVGALSAALAVAFTTPPAXXXXXXXXDRCPHNISGGPRSSGSNRLRPQRQRQHHACHVSRGEPHSSPGSELPAAVLGVGGGRRRARVRQRRSASYGNTGGRTVAGAPRWAVVAPDGSRPEWYLCGSGSGEATAVADEEEVRLEEXXXXXXXXXXAFRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYWSNDENLRKEVVKFWADLGVASDKIPNQTLMHFFRAHALKYGVALRGGVDDCAEWLNVEAIPGKWSLALLEREVAQLLEEGKLGSKSVA 315
BLAST of mRNA_E-siliculosus-1a_M_contig71.15306.1 vs. uniprot
Match: A0A835YWW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWW7_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.980e-43 Identity = 135/417 (32.37%), Postives = 187/417 (44.84%), Query Frame = 3
Query: 705 AYWSNDENIRNEVVKFWADLGVASDKVPNQTLMHFFRAHALKYGVALRGGVDDCAEWLNVEAIPGKWSLALLEREVAQLLEEGKLGSKSIASGPQGGGSELIKIATKGWPSRE----ALEMGNRASASKHMLEKCAS------GYWTAGNNFEREVLAFNTNYQLEEGLPAVWMVKLIDMINNGRRDIVNAIQRAGGYDPAVERLGLVHHIEWKSFADQLETLRELKEFLTVDGALQKRMPTLTAFNEAGRGRLRKKIVLLGGRKLLARKMGLQYKPKGKEGVE---EIDGLH----------------------------FGNFDLGFAVDVLEYVYEQELRRS-PVPKPPVRKKRRPRGSGKLPVRSRFHVRSPAIMLPRRDHMLAGGAKSVKLVEKIEFYGGYEHVARRLNLGY 1829
YW + N+R E+ +FW GV S VP+ L+ +F L +G++ GG + L V +P +W+ A+ EV L+ G L + S +GP GG + L+K T + S A ++ R +LE YW N ER++ F YQ G P VW+ + ++ GR DI AI R GG D R LV H +W F L L++L+ ++ G + MP L + G RLR I GG KLLA K+ +Q P+ E ++ GL +G+FDL FAVD++EYV Q RR P VR RG F I +P R +LA + KLV KIE YGG+E+VARRL L Y
Sbjct: 67 GYWLDSNNVRKELDRFWQSKGVESSCVPSYLLLQYFEEGGLAWGISQWGGGQRVGQRLGVPVMPSRWAQAVNTTEVQALMANGHLSADSATTGPYGGAAGLVKHGTARFKSVRLQLLARDVRQRFVKPGSVLEGRPKVGYKPRNYWRDFTNLERQIFDFLRVYQPAIGQPMVWLPRRVEFERAGRADIAQAITRLGGPDMVAGRHALVPHSQWAYFDKHLSVLKDLQSYIEQFG-VSGYMPPLKELDANGFSRLRDGIAWAGGAKLLAAKLDMQLTPRNHRPTEPPPKVKGLTAMVATDPEAMAAAAAAAADSGQLWGGVVWGDFDLDFAVDLMEYVKSQSYRRELGEASPAVR-----RGEA-------FPWWDSEITMPFRTDLLAD--RQTKLVLKIEEYGGFENVARRLQLVY 468
BLAST of mRNA_E-siliculosus-1a_M_contig71.15306.1 vs. uniprot
Match: A0A4D9CZ74_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ74_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.680e-31 Identity = 112/412 (27.18%), Postives = 182/412 (44.17%), Query Frame = 3
Query: 705 AYWSNDENIRNEVVKFWADLGVASDKVPNQTLMHFFRAHALKYGVALRGGVDDCAEWLNVEAIPGKWSLALLEREVAQLLEEG--------------------------KLGSKSIASGPQGGG---SELIKIA----TKGWPSREALEMG----NRASASKHMLEKCASGYWTAGNNFEREVLAFNTNYQLEEGLPAVWMVKLIDMINNGRRDIVNAIQRAGGYDPAVERLGLVHHIEWKSFADQLETLRELKEFLTVDGALQKRMPTLTAFNEAGRGRLRKKIVLLGGRKLLARKMGLQYKPKGKEGVEEIDGLHFGNFDLGFAVDVLEYVYEQELRRSPVPKPPVRKKRRPRGSGKLPVRSRFHVRSPAIMLPRRDHMLAGGAKSVKLVEKIEFYGGYEHVARRLNLGY 1829
YW + I+ V +FW L V S +PN+ L+ + AH L++ + +GG + A L + IPG + +A+ EV L+E G L + + GP+GG +E +K + G P + G NR S +EK A +T + +P ++ KL D++ GR +++N I+R GGY+ + LG + +W F +++LK +L + ++MPTL AG RL ++ GGRKL+A ++GL K E + + +G FD F V +LEY+ + + P + R+K R + LP + ++ G + L+EKI YGG+E+VARRL LG+
Sbjct: 105 GYWKDISQIKVSVEEFWTRLNVTSSAIPNEMLLRLYDAHGLRHAIYKQGGRETLAYLLETDYIPGDFRVAMKFPEVQALVEAGVVVPPASPENKVLLDSPSLPPSAQAHPLQERRLVIGPRGGAVILNERLKNVRFPPSYGKPDGQGRPGGWKYQNRTVWS---IEKLAEECYTLAEEHSASL-----------HVPLLFFPKLSDLVGWGRANMINTIRRYGGYEAVISSLGFIPFSQWNYFCRFYLLMKDLKTYLDEEEGGSRQMPTLRDVKRAGYHRLYSEVARNGGRKLVAARLGLPLKAGSGEKGKFATMISYGAFDFDFGVALLEYIMNKCWAQHPRERAARREKERVN-----------------LFLPTAEELV--GDERQDLLEKIVRYGGFENVARRLQLGF 483
BLAST of mRNA_E-siliculosus-1a_M_contig71.15306.1 vs. uniprot
Match: W7T9M4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9M4_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.470e-30 Identity = 107/398 (26.88%), Postives = 176/398 (44.22%), Query Frame = 3
Query: 705 AYWSNDENIRNEVVKFWADLGVASDKVPNQTLMHFFRAHALKYGVALRGGVDDCAEWLNVEAIPGKWSLALLEREVAQLLEEGKLGSKSIASGPQGGGSELIKIATKGWPSREA-LEMGNRASAS--KHMLEKCA-------------SGYWTAGNN-------FEREVLAFNTNYQLEEGLPAVWMVKLIDMINNGRRDIVNAIQRAGGYDPAVERLGLVHHIEWKSFADQLETLRELKEFLTVDGALQKRMPTLTAFNEAGRGRLRKKIVLLGGRKLLARKMGLQYKPKGKEGVEEIDGLHFGNFDLGFAVDVLEYVYEQELRRSPVPKPPVRKKRRPRGSGKLPVRSRFHVRSPAIMLPRRDHMLAGGAKSVKLVEKIEFYGGYEHVARRLNLGY 1829
YW + I+ V +FW L V S +PN+ L+ + AH L++ + +GG + A L + IPG + +A+ EV L+E G + + S + + +P +E L +G R A L+ G W N E A + +P ++ KL D++ GR +++N I+R GGY+ + LG + +W F +++LK +L + ++MPTL AG RL ++ GGRKL+A ++GL K E + + +G FD F V +LEY+ + + P + R+K R + LP + ++ + L+EKI YGG+E+VARRL LG+
Sbjct: 245 GYWKDISQIKVSVEEFWTRLNVTSSAIPNEMLLRLYDAHGLRHAIYKQGGRETLAYLLETDYIPGDFRVAMKFPEVQALVEAGVIVPPASPENKVLLDSPSLPPSAHAYPLQERRLVIGPRGGAVILNERLKNVRFPPSYGKPDGQGRPGGWKYQNRTVWSIEKLAEECYALAEEHSASLHVPLLFFPKLSDLVGWGRANMINTIRRYGGYEAVISSLGFIPFSQWNYFCRFYLLMKDLKTYLDEEEGGSRQMPTLRDVKRAGYHRLYSEVARNGGRKLVAARLGLPLKAGSGEKGKFATMISYGAFDFDFGVALLEYIMNKCWAQHPRERAARREKERVN-----------------LFLPTAEELVVDERQD--LLEKIVRYGGFENVARRLQLGF 623
BLAST of mRNA_E-siliculosus-1a_M_contig71.15306.1 vs. uniprot
Match: A0A6H5L5N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N4_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.520e-12 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 3
Query: 1509 GKEGVEEIDGLHFGNFDLGFAVDVLEYVYEQELRR 1613
GKEGVEEIDGLHFG FDLGFAVDVLEYVYEQELRR
Sbjct: 7 GKEGVEEIDGLHFGKFDLGFAVDVLEYVYEQELRR 41
BLAST of mRNA_E-siliculosus-1a_M_contig71.15306.1 vs. uniprot
Match: A0A7S0DXF9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DXF9_9CRYP) HSP 1 Score: 61.6 bits (148), Expect = 2.240e-6 Identity = 56/207 (27.05%), Postives = 92/207 (44.44%), Query Frame = 3
Query: 1209 DMINNGRRDIVNAIQRAGGYDPAVERLGLVHHIEWKSFADQLETLRELKEFLTVDGALQKRMPTLTAFNEAGRGRLRKKIVLLGGRKLLARKMGLQYKPKGKEGVEEIDGLHFGNFDLGFAVDVLEYV--YEQELRRSPVPKPPVRKKRRPRGSGKLPVRSRFHVRSPAIMLPRRDHMLAGGAKSVKLVEKIEFYGGYEHVARRLNL 1823
D+ +GR DI+NAI R GG ++ G + E+ + L+EL+ + G L K MP GR L + I GG+ +LA ++ LQ + K L++G F + FA+D++E + +E+ G G+ I++P + A ++EKIE+YGG+ VARR+ +
Sbjct: 210 DLKESGRTDIINAIYRYGGRKHIAKKFGFLLASEYNYLVEFYFLLKELRAYQQEKGQLGK-MPPFKQLTADGRRDLMRMICKHGGQNVLAARLDLQMDVRRKP------YLYWGPFSIDFAIDLIEIAGRHCEEV-----------------GQGER------------ILMPNATTLQA--INRTDMIEKIEYYGGFVDVARRVGM 378 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig71.15306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig71.15306.1 >prot_E-siliculosus-1a_M_contig71.15306.1 ID=prot_E-siliculosus-1a_M_contig71.15306.1|Name=mRNA_E-siliculosus-1a_M_contig71.15306.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=666bp MPSVGRKRVARPRRRPLDSSLAVAAVGALSAALTVAFTTPPAAVPRHHHHback to top mRNA from alignment at E-siliculosus-1a_M_contig71:609936..618117- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig71.15306.1 ID=mRNA_E-siliculosus-1a_M_contig71.15306.1|Name=mRNA_E-siliculosus-1a_M_contig71.15306.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8182bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig71:609936..618117- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig71:609936..618117- >mRNA_E-siliculosus-1a_M_contig71.15306.1 ID=mRNA_E-siliculosus-1a_M_contig71.15306.1|Name=mRNA_E-siliculosus-1a_M_contig71.15306.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3996bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig71:609936..618117- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |