mRNA_E-siliculosus-1a_M_contig7.15189.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A6H5KF38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE) HSP 1 Score: 1012 bits (2616), Expect = 0.000e+0 Identity = 615/699 (87.98%), Postives = 621/699 (88.84%), Query Frame = 3
Query: 63 MSVPRKVLLSVLAITHVLSLVPPLSTPPS-RTTGLLRGRTATSNQSRRGSGSSRVVRCRHRPRQYTVVGEGGAVAAGDSLSMAVGERKAAPGRSSISSRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATDPAGPVNRGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATT-AAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXX-----GEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2138
M VPRK+LLSVLAITHVLSLVPPLSTPPS RTTGLLRGRTATSN SRRG+GSSRVVRCRHRPRQYTVV EGGA AAGDSLSM VGER+AA GRSSISSRQR XXXXXXXXXXXXXXXXXXXXXXXXXX AA GPVN GTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSE TRASLHELLARSLSPTHADEDEGEDEEEA RLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSH+YVVCPPEQKLAVLRALVKRELGVSASEAA + XXXX AGEGD PSEGQAGGGGV NT +QADTRGLVFALATKPLEGIAASLDKALGGRGS XXXXXXX XXXXXXXXXXXXX G QPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR
Sbjct: 1 MPVPRKILLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGTGSSRVVRCRHRPRQYTVVEEGGAEAAGDSLSMVVGERRAALGRSSISSRQRRRSARVCHDATXXXXXXXXXXXXXXXXXXXXXXXXXXASQDSPAPLLDGGNVFSSTPNGAAAADPGPVNGGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAVRLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHHYVVCPPEQKLAVLRALVKRELGVSASEAAAKLTSGAPPXXXXLGATAVATTAGEGDSPSEGQAGGGGVANTDVQADTRGLVFALATKPLEGIAASLDKALGGRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 699
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: D8LSP0_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI) HSP 1 Score: 788 bits (2035), Expect = 9.130e-275 Identity = 444/521 (85.22%), Postives = 447/521 (85.80%), Query Frame = 3
Query: 576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2138
TFRELFRGRLPDWLL RLEQLGFATPTLVQRQALEVILGE KHDAVLHAQTGSGKTLAFLLPLL RVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGR+SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSE TRASLHELLARSLSPTHADEDEGEDEE AARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE+KLAVLR DTRGLVFALATKPLEGIAASLDKALGGRGS G XXXXXXX XXXXXXXXX EQPPQPPLAEFLR+ELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR
Sbjct: 5 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEGAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRT-----------------------------------------------------------DTRGLVFALATKPLEGIAASLDKALGGRGS-GXXXXXXXXXXXXXXXXXXXAKGWDEQPPQPPLAEFLRQELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 465
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A835Z5K4_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA) HSP 1 Score: 489 bits (1258), Expect = 2.650e-157 Identity = 301/518 (58.11%), Postives = 360/518 (69.50%), Query Frame = 3
Query: 576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAG-RVTGAAAPVN---RKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQP----PLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
T+REL+ RLP WL+ RLE+LGFA PTLVQ++AL+ IL HDAVLHAQTGSGKTLAFL+PL A +DPSRA+VQGLVVVPTRELGLQVA VAKRLAA T + ++ VMSVLEGS+N+RQRAWAWA+PPH+VIGNPE+L+ LV GAVR N V YVVVDEVDACL S D RA+L LLAR LSPT A E+E E + ++ G VTGAAA + R++R RQTVFASATVPQHNHF+RQCV +QWTL EPVHVQVH KEAMPP L+H+YV C P +KLA LRALV+RELG GDG R LVFA A +PL+ +AA+LD L R +RGG XXXXX XXXXXXXXXXXXX PLA+ LRE+LGL RADA++ +R G R+L++TD+AARGLDVPE THVF+ DLP D EGY+HRGGRA V+S+VTP+QEFV++RL N +GV++ ++
Sbjct: 57 TYRELYGERLPQWLIERLEELGFAKPTLVQQRALDTILAG--HDAVLHAQTGSGKTLAFLVPLFACIDPSRASVQGLVVVPTRELGLQVAAVAKRLAAATGAATGGRVMVMSVLEGSNNRRQRAWAWAEPPHVVIGNPETLSALVAGGAVRCNGVRYVVVDEVDACLRSGDARAALTALLARHLSPTFAQEEEAE-------VPQLPGGVAVTGAAAAADGARRRVRARQTVFASATVPQHNHFMRQCVAQQWTLAEPVHVQVHPKEAMPPGLTHHYVTCAPAKKLAALRALVRRELG-------------------------------GDGXXX------------XXXAPRALVFAQANRPLDQMAAALDADL--RKARGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLADVLREDLGLARRADAVARYRAGAARVLLTTDLAARGLDVPETTHVFHFDLPADAEGYIHRGGRAXXXXXXXXVVSIVTPEQEFVLQRLANAVGVEVAQL 520
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A7S4MVY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA) HSP 1 Score: 355 bits (910), Expect = 8.310e-106 Identity = 231/580 (39.83%), Postives = 313/580 (53.97%), Query Frame = 3
Query: 564 VNRGTFRELFRG-----RLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAA--GTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSED---------TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFR--------------------------------------EGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2138
++ +F EL+ LP WL R + G+ TPTLVQR++L+ IL D V+ AQTGSGKTL+FLLPLL+++D SR+A+Q ++VVPTRELGLQ++ VA+RLAA G + + KI VM +L+GS NKRQRAWAWA+PPH+V+G P+ LT++V+ G +R NAV +VVVDEVDACLL+ + LHELL+R LSPT+ + D + + +A L A + G++ V+ DRQTVF+SAT+PQHNHF+RQCVQ QWT+ EP HV E +PP LSH YVVC E K LR ++KRE V L+ + LVF +PLE +AA++ L G R + LR E L+AR+ AM+ FR G R+++STD+AARGLDV +++HV N DLP DG+ YVHRGGRAGRLGR G V+SL+T +QEFV++RL N +G+ ++ + R +R
Sbjct: 86 LSEESFTELYTASSSGEELPLWLTERCSECGWPTPTLVQRRSLDAILTG--MDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTYDEVDVLDGD--SASLVSSSAADLAGSSKTVSHGT-DRQTVFSSATIPQHNHFMRQCVQNQWTVREPTHVCASPGELVPPTLSHSYVVCDGNENKPIGLRRIIKRE----------------------------------------------VRRGRLR---KALVFCEPQRPLENMAAAIAADLNGT-------VWTESRNDDIEYAGV-------------IVSVLRYEESLSARSAAMAAFRGPNSRLKVRDNIMASSKQGQDSGFIEDIDALNQEGVESHGGVRIMLSTDLAARGLDVTDVSHVINYDLPNDGDTYVHRGGRAGRLGRKGTVLSLITGEQEFVLQRLANKLGLAVQCVARQEKEGRKRR 591
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A1Z5KA53_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA53_FISSO) HSP 1 Score: 337 bits (863), Expect = 4.080e-100 Identity = 215/524 (41.03%), Postives = 283/524 (54.01%), Query Frame = 3
Query: 576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVIL-GEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLLSED-----TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEF---LREELGLNARADAMSLFREGK---TRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
T + ++ +LP WLL R + LG+ PT +Q AL+V+L E K D V+ A+TGSGKTL +LLP LA +DP+R+ VQ ++VVPTRELGLQVA VAKRL A + KI +MSVL+GS N+RQRAWAWA+PP +VIG PE L+++V G + R N++ VVVDEVDACLL+ + LHELL++ LS T D+DE ED +GA T R+L RQT+ SAT+PQH HFI+QCVQ +WT TEPV V + E + PP L H Y+VC PE KLA L+ ++ L + + LVFA +PLE +A +L E + P P+ LR + L RA AM F R+L STD+AARGLDV +THV + DLP D + YVHR GR GRLGR G+V+S V P+QEFV+ RL N + +D++ +
Sbjct: 59 TLLQRYQYQLPSWLLQRCQDLGYIHPTRIQIAALDVLLLDEHKPDVVIQAETGSGKTLCYLLPTLAAIDPTRSTVQAILVVPTRELGLQVAKVAKRLVAAS----PHKIYIMSVLQGSQNRRQRAWAWAEPPQVVIGTPEELSKMVQLGGIKRYNSIEMVVVDEVDACLLNNAGSLQLAASPLHELLSKQLSATFLDKDEVEDT--------MGALSST----RPKRRLHARQTILCSATIPQHKHFIKQCVQNRWTTTEPVLVALQTGEQLLPPTLEHVYMVCRPETKLAALKRFFRKLL-------------------------------------------------SSPVPFKVLVFAEEQRPLEEMALAL----------------AWEAEHGVYWQESTAKAVQDNPTDKPIQAITAVLRYQDNLTQRAAAMDAFTRSDDDIVRVLFSTDLAARGLDVANVTHVIHFDLPPDADTYVHRAGRTGRLGRSGQVLSFVAPEQEFVLNRLANKLSLDLRCV 501
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A7S3VGM2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA) HSP 1 Score: 336 bits (861), Expect = 1.690e-99 Identity = 225/545 (41.28%), Postives = 302/545 (55.41%), Query Frame = 3
Query: 564 VNRGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGT-SSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSED-----TRAS----------LHELLARSLSPTHADEDEGEDEE--EAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLA---EFLREELGLNARA-DAMSLFRE--------GKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
++ TF E F +P WL +R ++ G+ PTL+Q +A++ IL +G +D ++ AQTGSGKTL +LLPLL+R+DP+R+++QG++VVPTRELG+QVA VA+RLAAG+ S +KI VMSVL+GS NKRQRAWA +DPPH+VIG P L +V ++ +AV +VVVDEVDACLL+ +++S LHELL+R LSPT +E EDEE + L E G R+ DRQTVF SAT+PQHNHF++ CVQ QW + EPV+V E +PP L H YVVC EQK+ L ++ +++ + L R LVF + LE +A L + L + E P +A EF + L R D +S E G R+L+STD+AARGLD+ +ITHV N DLP +G+ YVHRGGRAGRLGR G V+SL+T +QEFV+ RL N +G+DIK I
Sbjct: 54 LSNETFAEHFP-TMPRWLSSRADECGWKNPTLIQHRAIDAILNDG-NDVIIQAQTGSGKTLGYLLPLLSRIDPTRSSIQGIIVVPTRELGVQVARVARRLAAGSVDSETGAKIMVMSVLQGSGNKRQRAWARSDPPHVVIGTPRELGDIVKRKGMKYHAVKFVVVDEVDACLLNNQGTIVSSKSSKSLNVSGSGPLHELLSRYLSPTF---EEAEDEEVIQQLSLVEGGGSRIVSHGT-------DRQTVFVSATIPQHNHFLKSCVQNQWMVREPVYVCASPGELIPPTLKHCYVVCKGMEQKMGGLIRMIHKQIMKR-------------------------------------------KKSKLDTTCRVLVFCEPKRHLEEMAEILKRDLS--------------KSLDSVYDVSASVLRYEDPTSVRMAAMEEFRGADTYLGGRIMDEVSEGDEKDTSQGVKGDLRILLSTDIAARGLDISDITHVINFDLPHEGDIYVHRGGRAGRLGRKGLVMSLITHEQEFVLERLANKLGLDIKCI 529
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: B7FRY7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC) HSP 1 Score: 326 bits (836), Expect = 6.270e-95 Identity = 218/562 (38.79%), Postives = 299/562 (53.20%), Query Frame = 3
Query: 558 GPVNRGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRE-----SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLL-------SEDTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVH-AKEAMPPCLSHYYVVC-PPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFR-EGKT----------------------RLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRR 2129
G ++ +F + LP WL+ + + G+ P+ +Q +AL+ IL E + DAV+ A+TGSGKTLA+LLP LA +D SRAAVQ L+VVPTRELGLQVA VAKRLAA ++ +I VMSVL+GS N+RQRAWAWA+PPH+VIG P+ L +V G + R N+V ++VVDEVDACLL S ++LHELL++ LSPT+ D E ++ R + T + P++ + RQT+FASAT+PQH HF++QC Q QWTL EP HV + ++ +P L H Y VC +QKLA LR LV + S ++ + LVF+ A +PLE +A L + G G +E + LR E L+ RA A+ FR +G T R+L STD+AARGLD+ +I+HV + DLP D + YVHR GR GR GR G+V+ +++P QEFV+ RL N + VD K I ++R
Sbjct: 127 GSLSAESFESRYAAVLPSWLIQKCAECGWTHPSRIQEKALDAILFE-RRDAVVQAETGSGKTLAYLLPALASIDGSRAAVQALIVVPTRELGLQVARVAKRLAAASTQNDNVTLNGGRIMVMSVLQGSQNRRQRAWAWAEPPHLVIGTPQELCDMVKLGGIKRYNSVKFIVVDEVDACLLNNAGSLTSNLASSTLHELLSKYLSPTYDDGSANEADDNVLRSVKTSTKTAT-STRPLSSQ---RQTIFASATIPQHRHFLKQCAQNQWTLREPTHVCLRPGEQLLPATLEHSYAVCRSTDQKLATLRRLVTKIYAKS----------------------------------------------VIEPPKKVLVFSDARRPLEEMAQILANDIEG----GMLWKDGYGKEQERDVRA--------------VVAVLRYEDSLSQRAAAIDSFRGDGYTMASGASQTYTSRDNDSDTAPSLRVLFSTDLAARGLDIADISHVIHFDLPPDADTYVHRAGRTGRFGRSGQVLCIISPDQEFVLTRLTNKLNVDTKCIARQQKKKR 619
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: W7TME3_9STRA (RNA helicase, DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TME3_9STRA) HSP 1 Score: 320 bits (820), Expect = 8.670e-93 Identity = 222/575 (38.61%), Postives = 299/575 (52.00%), Query Frame = 3
Query: 576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAG---------TSSGRES----------------------------KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPT--------HADEDEGEDEEEAARLAEVGA---------GRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE-QKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPK 2135
TF +L+ RLP WLL R+E LG+ PT VQ++AL IL EG+ D V+H+QTG+GKTLAF+LPLLA +D ++ AVQ LVVVP+RELGLQVA VAK+LA+G GR++ KI +MS+LEGS N+RQ+AW A+PPH+VIGNP SL +LV G +R + V VVVDEVDACL S +T L LL + LSP+ A G ++E L GA GRV AP KL RQT+F SA++PQH HFI+QCVQ+QWTL EP+HV V E MPP L H Y+V P + K A L A ++RE +A ++F + E +AA L ++ GG + G +E GE + RA M FR G++ LV+TD AARGLDVP ++HV LD+ + + Y+HRGGRAGR+GRPG V+SLV+ + F + RL N + ++++++ + +RP+
Sbjct: 117 TFSQLYGDRLPSWLLARVESLGYTRPTAVQKEALGAIL-EGE-DVVVHSQTGTGKTLAFMLPLLAGIDVNKNAVQALVVVPSRELGLQVASVAKQLASGHMYYRGEDGQEEGRDAENEDPERREEGVGSESMTAGASNVRAAKKILIMSLLEGSKNRRQKAWVLAEPPHVVIGNPRSLAQLVERGGIRYHQVKMVVVDEVDACLTSPETGRELQGLLGKYLSPSFLTAELEEEATATGGSSKDEEGPLLPQGAMKDGGGEKGGRVARKLAPW--KLVHRQTLFVSASIPQHKHFIKQCVQQQWTLREPMHVHVTPGELMPPGLRHGYLVAPTKADKPAALLAFLRRERAKGRLQAC-------------------------------------------------VIFTADDREAEKMAAILARS-GGLAAGG--------QEPRGESSVVQALVGGEH---------------IARRAKVMDAFRAGESWGLVTTDFAARGLDVPRVSHVIMLDVAGEADTYLHRGGRAGRMGRPGWVVSLVSETEAFALVRLANSLKIEVRRMGV---MKRPR 611
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A1E7FWP3_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWP3_9STRA) HSP 1 Score: 315 bits (808), Expect = 2.950e-92 Identity = 209/533 (39.21%), Postives = 292/533 (54.78%), Query Frame = 3
Query: 576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLL-----------SEDTRA---SLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVF--ALATKPLEGI----AASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFRE-GKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
+F EL+ LP+WLL + E+ + PTL+Q+++L+ + + V+ AQTGSGKTL +LLPLL++++ RA+VQ ++VVPTRELGLQVA VAKRL GR K VMS+LEGSS KRQR WAWA+ P +VIG P L +V G + R+++V+ VVVDEVDACL+ S DT+A SL+ELL++ LSPT DED+ D+E + R RK R RQT+F SAT+PQH HF++QC QWTL EPV+V E +PP L H Y+VC E+K+A LR ++K+ L S+++ LVF + +++PL+ I A S+D + E P+ LR E L+ RA A F E + R++ +TD+AARGLD+ +TH+ + DLP+D + Y+HR GRAGRLG+ G VIS++ P QEFV++RL N + VD+K +
Sbjct: 67 SFSELYSDNLPEWLLEKCEEYNYKCPTLIQQRSLDCFFDDDPNSMVIQAQTGSGKTLTYLLPLLSKLE-DRASVQAMIVVPTRELGLQVAMVAKRLV-----GR--KFMVMSLLEGSSLKRQRKWAWAETPQVVIGTPTELLDMVRYGGLPRISSVNTVVVDEVDACLVHTSSLQGGSNNSVDTKALASSLNELLSKFLSPTFIDEDDIIDDEVITIADDSNKKR--------KRKFRHRQTIFCSATIPQHRHFLKQCKANQWTLEEPVYVCTSPGEHLPPTLDHAYMVCNSNEKKMATLRNIIKK-LNTSSNKI--------------------------------------------------LVFFDSTSSRPLDIIGKKLALSIDNGI----------------------FYEDKKTNLEDIQSNPVVSILRFEDSLSQRAGATKAFAERSEFRIMATTDLAARGLDILGVTHIIHFDLPIDADTYLHRSGRAGRLGQKGSVISILNPDQEFVLKRLSNALSVDVKCV 510
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A7S1TTQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTQ5_9STRA) HSP 1 Score: 312 bits (800), Expect = 8.050e-91 Identity = 203/533 (38.09%), Postives = 279/533 (52.35%), Query Frame = 3
Query: 576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQAL-EVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPTHADEDEGED---EEEAARLAEVGAG------RVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTE---------PVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIA----ASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
+FR+L+ LPDWLL RLE+LGF PTL Q AL + GE D VLHAQTGSGKTLA+LLPLLA++DPSRAAVQ L+ VP+RELGLQVA V K+L T+ +E KI VMS LEGS +RQRAWAWA+PPH+VI P L L+ +GA++ + V+YVVVDE D C+L E + LHELL+RSL+P H E +D E+ L E G GA + ++ + RQTVF SAT+PQ HF+ Q++W P +V++ + +P LSH + V P E+K LRAL+KRE EA A P+E ++A+ F PL +A A L K+ G G R+ L + +R++ + RA + +R G+ ++L+S + RGLDVP+ TH+FN+ LP D Y HR G + +++T ++ F + RL N +GV ++I
Sbjct: 57 SFRQLYGTELPDWLLGRLEELGFRNPTLAQEAALGPLFAGE---DVVLHAQTGSGKTLAYLLPLLAQIDPSRAAVQALIAVPSRELGLQVASVLKQLC--TTQTKEDKIMVMSALEGSQLRRQRAWAWAEPPHVVISTPPQLQTLIDSGAIKASGVTYVVVDEADNCMLDEGLESPLHELLSRSLNPNHWTSLEIQDLALREDVRELEEAGVALPGLGLEDAGAGSSGDKSKKRRQTVFCSATIPQSKHFLETTNQRRWLDVRGQDKDAPKLPTYVRLAREAPLPAGLSHAFAVVPREKKAVALRALLKRETSAGRFEAGLVFAADWSPK-----------------PAE-----------EVEAEKLLNPF---LDPLGDLAKLLSADLAKSASQEGDGDGKCEGAAPRD---------------------LVQIIRKDDNIADRASVVQRYRSGEHKILLSDGVGERGLDVPQTTHIFNMQLPRDTAAYAHRAGXXXXXXXXXNIFTIITEEERFALERLANALGVSFEEI 532 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig7.15189.1 >prot_E-siliculosus-1a_M_contig7.15189.1 ID=prot_E-siliculosus-1a_M_contig7.15189.1|Name=mRNA_E-siliculosus-1a_M_contig7.15189.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=693bp MSVPRKVLLSVLAITHVLSLVPPLSTPPSRTTGLLRGRTATSNQSRRGSGback to top mRNA from alignment at E-siliculosus-1a_M_contig7:2049425..2055509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig7.15189.1 ID=mRNA_E-siliculosus-1a_M_contig7.15189.1|Name=mRNA_E-siliculosus-1a_M_contig7.15189.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6085bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:2049425..2055509- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig7:2049425..2055509- >mRNA_E-siliculosus-1a_M_contig7.15189.1 ID=mRNA_E-siliculosus-1a_M_contig7.15189.1|Name=mRNA_E-siliculosus-1a_M_contig7.15189.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4158bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:2049425..2055509- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |