mRNA_E-siliculosus-1a_M_contig7.15189.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15189.1
Unique NamemRNA_E-siliculosus-1a_M_contig7.15189.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A6H5KF38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE)

HSP 1 Score: 1012 bits (2616), Expect = 0.000e+0
Identity = 615/699 (87.98%), Postives = 621/699 (88.84%), Query Frame = 3
Query:   63 MSVPRKVLLSVLAITHVLSLVPPLSTPPS-RTTGLLRGRTATSNQSRRGSGSSRVVRCRHRPRQYTVVGEGGAVAAGDSLSMAVGERKAAPGRSSISSRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATDPAGPVNRGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATT-AAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXX-----GEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2138
            M VPRK+LLSVLAITHVLSLVPPLSTPPS RTTGLLRGRTATSN SRRG+GSSRVVRCRHRPRQYTVV EGGA AAGDSLSM VGER+AA GRSSISSRQR           XXXXXXXXXXXXXXXXXXXXXXXXXX                      AA    GPVN GTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSE TRASLHELLARSLSPTHADEDEGEDEEEA RLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSH+YVVCPPEQKLAVLRALVKRELGVSASEAA    +    XXXX         AGEGD PSEGQAGGGGV NT +QADTRGLVFALATKPLEGIAASLDKALGGRGS   XXXXXXX  XXXXXXXXXXXXX     G QPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR
Sbjct:    1 MPVPRKILLSVLAITHVLSLVPPLSTPPSSRTTGLLRGRTATSNHSRRGTGSSRVVRCRHRPRQYTVVEEGGAEAAGDSLSMVVGERRAALGRSSISSRQRRRSARVCHDATXXXXXXXXXXXXXXXXXXXXXXXXXXASQDSPAPLLDGGNVFSSTPNGAAAADPGPVNGGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAVRLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHHYVVCPPEQKLAVLRALVKRELGVSASEAAAKLTSGAPPXXXXLGATAVATTAGEGDSPSEGQAGGGGVANTDVQADTRGLVFALATKPLEGIAASLDKALGGRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 699          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: D8LSP0_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI)

HSP 1 Score: 788 bits (2035), Expect = 9.130e-275
Identity = 444/521 (85.22%), Postives = 447/521 (85.80%), Query Frame = 3
Query:  576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2138
            TFRELFRGRLPDWLL RLEQLGFATPTLVQRQALEVILGE KHDAVLHAQTGSGKTLAFLLPLL RVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGR+SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSE TRASLHELLARSLSPTHADEDEGEDEE AARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE+KLAVLR                                                            DTRGLVFALATKPLEGIAASLDKALGGRGS G XXXXXXX  XXXXXXXXX     EQPPQPPLAEFLR+ELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR
Sbjct:    5 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEGAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRT-----------------------------------------------------------DTRGLVFALATKPLEGIAASLDKALGGRGS-GXXXXXXXXXXXXXXXXXXXAKGWDEQPPQPPLAEFLRQELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 465          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A835Z5K4_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA)

HSP 1 Score: 489 bits (1258), Expect = 2.650e-157
Identity = 301/518 (58.11%), Postives = 360/518 (69.50%), Query Frame = 3
Query:  576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAG-RVTGAAAPVN---RKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQP----PLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
            T+REL+  RLP WL+ RLE+LGFA PTLVQ++AL+ IL    HDAVLHAQTGSGKTLAFL+PL A +DPSRA+VQGLVVVPTRELGLQVA VAKRLAA T +    ++ VMSVLEGS+N+RQRAWAWA+PPH+VIGNPE+L+ LV  GAVR N V YVVVDEVDACL S D RA+L  LLAR LSPT A E+E E       + ++  G  VTGAAA  +   R++R RQTVFASATVPQHNHF+RQCV +QWTL EPVHVQVH KEAMPP L+H+YV C P +KLA LRALV+RELG                               GDG                    R LVFA A +PL+ +AA+LD  L  R +RGG  XXXXX  XXXXXXXXXXXXX           PLA+ LRE+LGL  RADA++ +R G  R+L++TD+AARGLDVPE THVF+ DLP D EGY+HRGGRA        V+S+VTP+QEFV++RL N +GV++ ++
Sbjct:   57 TYRELYGERLPQWLIERLEELGFAKPTLVQQRALDTILAG--HDAVLHAQTGSGKTLAFLVPLFACIDPSRASVQGLVVVPTRELGLQVAAVAKRLAAATGAATGGRVMVMSVLEGSNNRRQRAWAWAEPPHVVIGNPETLSALVAGGAVRCNGVRYVVVDEVDACLRSGDARAALTALLARHLSPTFAQEEEAE-------VPQLPGGVAVTGAAAAADGARRRVRARQTVFASATVPQHNHFMRQCVAQQWTLAEPVHVQVHPKEAMPPGLTHHYVTCAPAKKLAALRALVRRELG-------------------------------GDGXXX------------XXXAPRALVFAQANRPLDQMAAALDADL--RKARGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLADVLREDLGLARRADAVARYRAGAARVLLTTDLAARGLDVPETTHVFHFDLPADAEGYIHRGGRAXXXXXXXXVVSIVTPEQEFVLQRLANAVGVEVAQL 520          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A7S4MVY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA)

HSP 1 Score: 355 bits (910), Expect = 8.310e-106
Identity = 231/580 (39.83%), Postives = 313/580 (53.97%), Query Frame = 3
Query:  564 VNRGTFRELFRG-----RLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAA--GTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSED---------TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFR--------------------------------------EGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR 2138
            ++  +F EL+        LP WL  R  + G+ TPTLVQR++L+ IL     D V+ AQTGSGKTL+FLLPLL+++D SR+A+Q ++VVPTRELGLQ++ VA+RLAA  G  +  + KI VM +L+GS NKRQRAWAWA+PPH+V+G P+ LT++V+ G +R NAV +VVVDEVDACLL+           +   LHELL+R LSPT+ + D  + +  +A L    A  + G++  V+    DRQTVF+SAT+PQHNHF+RQCVQ QWT+ EP HV     E +PP LSH YVVC   E K   LR ++KRE                                              V    L+   + LVF    +PLE +AA++   L G             R                      +   LR E  L+AR+ AM+ FR                                       G  R+++STD+AARGLDV +++HV N DLP DG+ YVHRGGRAGRLGR G V+SL+T +QEFV++RL N +G+ ++ +       R +R
Sbjct:   86 LSEESFTELYTASSSGEELPLWLTERCSECGWPTPTLVQRRSLDAILTG--MDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTYDEVDVLDGD--SASLVSSSAADLAGSSKTVSHGT-DRQTVFSSATIPQHNHFMRQCVQNQWTVREPTHVCASPGELVPPTLSHSYVVCDGNENKPIGLRRIIKRE----------------------------------------------VRRGRLR---KALVFCEPQRPLENMAAAIAADLNGT-------VWTESRNDDIEYAGV-------------IVSVLRYEESLSARSAAMAAFRGPNSRLKVRDNIMASSKQGQDSGFIEDIDALNQEGVESHGGVRIMLSTDLAARGLDVTDVSHVINYDLPNDGDTYVHRGGRAGRLGRKGTVLSLITGEQEFVLQRLANKLGLAVQCVARQEKEGRKRR 591          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A1Z5KA53_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA53_FISSO)

HSP 1 Score: 337 bits (863), Expect = 4.080e-100
Identity = 215/524 (41.03%), Postives = 283/524 (54.01%), Query Frame = 3
Query:  576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVIL-GEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLLSED-----TRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEF---LREELGLNARADAMSLFREGK---TRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
            T  + ++ +LP WLL R + LG+  PT +Q  AL+V+L  E K D V+ A+TGSGKTL +LLP LA +DP+R+ VQ ++VVPTRELGLQVA VAKRL A +      KI +MSVL+GS N+RQRAWAWA+PP +VIG PE L+++V  G + R N++  VVVDEVDACLL+         + LHELL++ LS T  D+DE ED         +GA   T       R+L  RQT+  SAT+PQH HFI+QCVQ +WT TEPV V +   E + PP L H Y+VC PE KLA L+   ++ L                                                 +     + LVFA   +PLE +A +L                    E              + P   P+      LR +  L  RA AM  F        R+L STD+AARGLDV  +THV + DLP D + YVHR GR GRLGR G+V+S V P+QEFV+ RL N + +D++ +
Sbjct:   59 TLLQRYQYQLPSWLLQRCQDLGYIHPTRIQIAALDVLLLDEHKPDVVIQAETGSGKTLCYLLPTLAAIDPTRSTVQAILVVPTRELGLQVAKVAKRLVAAS----PHKIYIMSVLQGSQNRRQRAWAWAEPPQVVIGTPEELSKMVQLGGIKRYNSIEMVVVDEVDACLLNNAGSLQLAASPLHELLSKQLSATFLDKDEVEDT--------MGALSST----RPKRRLHARQTILCSATIPQHKHFIKQCVQNRWTTTEPVLVALQTGEQLLPPTLEHVYMVCRPETKLAALKRFFRKLL-------------------------------------------------SSPVPFKVLVFAEEQRPLEEMALAL----------------AWEAEHGVYWQESTAKAVQDNPTDKPIQAITAVLRYQDNLTQRAAAMDAFTRSDDDIVRVLFSTDLAARGLDVANVTHVIHFDLPPDADTYVHRAGRTGRLGRSGQVLSFVAPEQEFVLNRLANKLSLDLRCV 501          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A7S3VGM2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA)

HSP 1 Score: 336 bits (861), Expect = 1.690e-99
Identity = 225/545 (41.28%), Postives = 302/545 (55.41%), Query Frame = 3
Query:  564 VNRGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGT-SSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSED-----TRAS----------LHELLARSLSPTHADEDEGEDEE--EAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLA---EFLREELGLNARA-DAMSLFRE--------GKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
            ++  TF E F   +P WL +R ++ G+  PTL+Q +A++ IL +G +D ++ AQTGSGKTL +LLPLL+R+DP+R+++QG++VVPTRELG+QVA VA+RLAAG+  S   +KI VMSVL+GS NKRQRAWA +DPPH+VIG P  L  +V    ++ +AV +VVVDEVDACLL+       +++S          LHELL+R LSPT    +E EDEE  +   L E G  R+            DRQTVF SAT+PQHNHF++ CVQ QW + EPV+V     E +PP L H YVVC   EQK+  L  ++ +++                                                + L    R LVF    + LE +A  L + L               +               E P    +A   EF   +  L  R  D +S   E        G  R+L+STD+AARGLD+ +ITHV N DLP +G+ YVHRGGRAGRLGR G V+SL+T +QEFV+ RL N +G+DIK I
Sbjct:   54 LSNETFAEHFP-TMPRWLSSRADECGWKNPTLIQHRAIDAILNDG-NDVIIQAQTGSGKTLGYLLPLLSRIDPTRSSIQGIIVVPTRELGVQVARVARRLAAGSVDSETGAKIMVMSVLQGSGNKRQRAWARSDPPHVVIGTPRELGDIVKRKGMKYHAVKFVVVDEVDACLLNNQGTIVSSKSSKSLNVSGSGPLHELLSRYLSPTF---EEAEDEEVIQQLSLVEGGGSRIVSHGT-------DRQTVFVSATIPQHNHFLKSCVQNQWMVREPVYVCASPGELIPPTLKHCYVVCKGMEQKMGGLIRMIHKQIMKR-------------------------------------------KKSKLDTTCRVLVFCEPKRHLEEMAEILKRDLS--------------KSLDSVYDVSASVLRYEDPTSVRMAAMEEFRGADTYLGGRIMDEVSEGDEKDTSQGVKGDLRILLSTDIAARGLDISDITHVINFDLPHEGDIYVHRGGRAGRLGRKGLVMSLITHEQEFVLERLANKLGLDIKCI 529          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: B7FRY7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC)

HSP 1 Score: 326 bits (836), Expect = 6.270e-95
Identity = 218/562 (38.79%), Postives = 299/562 (53.20%), Query Frame = 3
Query:  558 GPVNRGTFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRE-----SKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLL-------SEDTRASLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVH-AKEAMPPCLSHYYVVC-PPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFR-EGKT----------------------RLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRR 2129
            G ++  +F   +   LP WL+ +  + G+  P+ +Q +AL+ IL E + DAV+ A+TGSGKTLA+LLP LA +D SRAAVQ L+VVPTRELGLQVA VAKRLAA ++          +I VMSVL+GS N+RQRAWAWA+PPH+VIG P+ L  +V  G + R N+V ++VVDEVDACLL       S    ++LHELL++ LSPT+ D    E ++   R  +      T +  P++ +   RQT+FASAT+PQH HF++QC Q QWTL EP HV +   ++ +P  L H Y VC   +QKLA LR LV +    S                                               ++   + LVF+ A +PLE +A  L   + G    G        +E                     +   LR E  L+ RA A+  FR +G T                      R+L STD+AARGLD+ +I+HV + DLP D + YVHR GR GR GR G+V+ +++P QEFV+ RL N + VD K I     ++R
Sbjct:  127 GSLSAESFESRYAAVLPSWLIQKCAECGWTHPSRIQEKALDAILFE-RRDAVVQAETGSGKTLAYLLPALASIDGSRAAVQALIVVPTRELGLQVARVAKRLAAASTQNDNVTLNGGRIMVMSVLQGSQNRRQRAWAWAEPPHLVIGTPQELCDMVKLGGIKRYNSVKFIVVDEVDACLLNNAGSLTSNLASSTLHELLSKYLSPTYDDGSANEADDNVLRSVKTSTKTAT-STRPLSSQ---RQTIFASATIPQHRHFLKQCAQNQWTLREPTHVCLRPGEQLLPATLEHSYAVCRSTDQKLATLRRLVTKIYAKS----------------------------------------------VIEPPKKVLVFSDARRPLEEMAQILANDIEG----GMLWKDGYGKEQERDVRA--------------VVAVLRYEDSLSQRAAAIDSFRGDGYTMASGASQTYTSRDNDSDTAPSLRVLFSTDLAARGLDIADISHVIHFDLPPDADTYVHRAGRTGRFGRSGQVLCIISPDQEFVLTRLTNKLNVDTKCIARQQKKKR 619          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: W7TME3_9STRA (RNA helicase, DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TME3_9STRA)

HSP 1 Score: 320 bits (820), Expect = 8.670e-93
Identity = 222/575 (38.61%), Postives = 299/575 (52.00%), Query Frame = 3
Query:  576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAG---------TSSGRES----------------------------KIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPT--------HADEDEGEDEEEAARLAEVGA---------GRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE-QKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPK 2135
            TF +L+  RLP WLL R+E LG+  PT VQ++AL  IL EG+ D V+H+QTG+GKTLAF+LPLLA +D ++ AVQ LVVVP+RELGLQVA VAK+LA+G            GR++                            KI +MS+LEGS N+RQ+AW  A+PPH+VIGNP SL +LV  G +R + V  VVVDEVDACL S +T   L  LL + LSP+         A    G  ++E   L   GA         GRV    AP   KL  RQT+F SA++PQH HFI+QCVQ+QWTL EP+HV V   E MPP L H Y+V P +  K A L A ++RE      +A                                                  ++F    +  E +AA L ++ GG  + G        +E             GE                +  RA  M  FR G++  LV+TD AARGLDVP ++HV  LD+  + + Y+HRGGRAGR+GRPG V+SLV+  + F + RL N + ++++++ +    +RP+
Sbjct:  117 TFSQLYGDRLPSWLLARVESLGYTRPTAVQKEALGAIL-EGE-DVVVHSQTGTGKTLAFMLPLLAGIDVNKNAVQALVVVPSRELGLQVASVAKQLASGHMYYRGEDGQEEGRDAENEDPERREEGVGSESMTAGASNVRAAKKILIMSLLEGSKNRRQKAWVLAEPPHVVIGNPRSLAQLVERGGIRYHQVKMVVVDEVDACLTSPETGRELQGLLGKYLSPSFLTAELEEEATATGGSSKDEEGPLLPQGAMKDGGGEKGGRVARKLAPW--KLVHRQTLFVSASIPQHKHFIKQCVQQQWTLREPMHVHVTPGELMPPGLRHGYLVAPTKADKPAALLAFLRRERAKGRLQAC-------------------------------------------------VIFTADDREAEKMAAILARS-GGLAAGG--------QEPRGESSVVQALVGGEH---------------IARRAKVMDAFRAGESWGLVTTDFAARGLDVPRVSHVIMLDVAGEADTYLHRGGRAGRMGRPGWVVSLVSETEAFALVRLANSLKIEVRRMGV---MKRPR 611          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A1E7FWP3_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWP3_9STRA)

HSP 1 Score: 315 bits (808), Expect = 2.950e-92
Identity = 209/533 (39.21%), Postives = 292/533 (54.78%), Query Frame = 3
Query:  576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAV-RVNAVSYVVVDEVDACLL-----------SEDTRA---SLHELLARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPP-EQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVF--ALATKPLEGI----AASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFRE-GKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
            +F EL+   LP+WLL + E+  +  PTL+Q+++L+    +  +  V+ AQTGSGKTL +LLPLL++++  RA+VQ ++VVPTRELGLQVA VAKRL      GR  K  VMS+LEGSS KRQR WAWA+ P +VIG P  L  +V  G + R+++V+ VVVDEVDACL+           S DT+A   SL+ELL++ LSPT  DED+  D+E      +    R         RK R RQT+F SAT+PQH HF++QC   QWTL EPV+V     E +PP L H Y+VC   E+K+A LR ++K+ L  S+++                                                   LVF  + +++PL+ I    A S+D  +                               E     P+   LR E  L+ RA A   F E  + R++ +TD+AARGLD+  +TH+ + DLP+D + Y+HR GRAGRLG+ G VIS++ P QEFV++RL N + VD+K +
Sbjct:   67 SFSELYSDNLPEWLLEKCEEYNYKCPTLIQQRSLDCFFDDDPNSMVIQAQTGSGKTLTYLLPLLSKLE-DRASVQAMIVVPTRELGLQVAMVAKRLV-----GR--KFMVMSLLEGSSLKRQRKWAWAETPQVVIGTPTELLDMVRYGGLPRISSVNTVVVDEVDACLVHTSSLQGGSNNSVDTKALASSLNELLSKFLSPTFIDEDDIIDDEVITIADDSNKKR--------KRKFRHRQTIFCSATIPQHRHFLKQCKANQWTLEEPVYVCTSPGEHLPPTLDHAYMVCNSNEKKMATLRNIIKK-LNTSSNKI--------------------------------------------------LVFFDSTSSRPLDIIGKKLALSIDNGI----------------------FYEDKKTNLEDIQSNPVVSILRFEDSLSQRAGATKAFAERSEFRIMATTDLAARGLDILGVTHIIHFDLPIDADTYLHRSGRAGRLGQKGSVISILNPDQEFVLKRLSNALSVDVKCV 510          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Match: A0A7S1TTQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTQ5_9STRA)

HSP 1 Score: 312 bits (800), Expect = 8.050e-91
Identity = 203/533 (38.09%), Postives = 279/533 (52.35%), Query Frame = 3
Query:  576 TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQAL-EVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHELLARSLSPTHADEDEGED---EEEAARLAEVGAG------RVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTE---------PVHVQVHAKEAMPPCLSHYYVVCPPEQKLAVLRALVKRELGVSASEAATTAAXXXXXXXXXXXXXXXXXAGEGDGPSEGQAGGGGVDNTALQADTRGLVFALATKPLEGIA----ASLDKALGGRGSRGGXXXXXXXREXXXXXXXXXXXXXGEQPPQPPLAEFLREELGLNARADAMSLFREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLGRPGKVISLVTPQQEFVIRRLGNGIGVDIKKI 2105
            +FR+L+   LPDWLL RLE+LGF  PTL Q  AL  +  GE   D VLHAQTGSGKTLA+LLPLLA++DPSRAAVQ L+ VP+RELGLQVA V K+L   T+  +E KI VMS LEGS  +RQRAWAWA+PPH+VI  P  L  L+ +GA++ + V+YVVVDE D C+L E   + LHELL+RSL+P H    E +D    E+   L E G           GA +  ++  + RQTVF SAT+PQ  HF+    Q++W             P +V++  +  +P  LSH + V P E+K   LRAL+KRE      EA    A                       P+E            ++A+     F     PL  +A    A L K+    G   G       R+                     L + +R++  +  RA  +  +R G+ ++L+S  +  RGLDVP+ TH+FN+ LP D   Y HR G          + +++T ++ F + RL N +GV  ++I
Sbjct:   57 SFRQLYGTELPDWLLGRLEELGFRNPTLAQEAALGPLFAGE---DVVLHAQTGSGKTLAYLLPLLAQIDPSRAAVQALIAVPSRELGLQVASVLKQLC--TTQTKEDKIMVMSALEGSQLRRQRAWAWAEPPHVVISTPPQLQTLIDSGAIKASGVTYVVVDEADNCMLDEGLESPLHELLSRSLNPNHWTSLEIQDLALREDVRELEEAGVALPGLGLEDAGAGSSGDKSKKRRQTVFCSATIPQSKHFLETTNQRRWLDVRGQDKDAPKLPTYVRLAREAPLPAGLSHAFAVVPREKKAVALRALLKRETSAGRFEAGLVFAADWSPK-----------------PAE-----------EVEAEKLLNPF---LDPLGDLAKLLSADLAKSASQEGDGDGKCEGAAPRD---------------------LVQIIRKDDNIADRASVVQRYRSGEHKILLSDGVGERGLDVPQTTHIFNMQLPRDTAAYAHRAGXXXXXXXXXNIFTIITEEERFALERLANALGVSFEEI 532          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF38_9PHAE0.000e+087.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSP0_ECTSI9.130e-27585.22DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z5K4_9STRA2.650e-15758.11DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S4MVY5_9STRA8.310e-10639.83Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A1Z5KA53_FISSO4.080e-10041.03Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3VGM2_9STRA1.690e-9941.28Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B7FRY7_PHATC6.270e-9538.79Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
W7TME3_9STRA8.670e-9338.61RNA helicase, DEAD-box type n=2 Tax=Monodopsidacea... [more]
A0A1E7FWP3_9STRA2.950e-9239.21p-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1TTQ5_9STRA8.050e-9138.09Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:2049425..2055509 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size2079
Model size3518
Exons6
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.JKL
EggNOG OGsCOG0513@1,KOG0327@2759
EggNOG free text desc.helicase activity
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031974,GO:0031981,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360
Seed eggNOG ortholog2880.D8LSP0
Seed ortholog evalue7.4e-225
Seed ortholog score786.9
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15189.1prot_E-siliculosus-1a_M_contig7.15189.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig7 2050802..2055447 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935941.4374397-UTR-E-siliculosus-1a_M_contig7:2049424..20508011622935941.4374397-UTR-E-siliculosus-1a_M_contig7:2049424..2050801Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig7 2049425..2050801 -
1696250856.6558974-UTR-E-siliculosus-1a_M_contig7:2049424..20508011696250856.6558974-UTR-E-siliculosus-1a_M_contig7:2049424..2050801Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig7 2049425..2050801 -
1622935941.5983462-UTR-E-siliculosus-1a_M_contig7:2055447..20555091622935941.5983462-UTR-E-siliculosus-1a_M_contig7:2055447..2055509Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig7 2055448..2055509 -
1696250856.7565486-UTR-E-siliculosus-1a_M_contig7:2055447..20555091696250856.7565486-UTR-E-siliculosus-1a_M_contig7:2055447..2055509Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig7 2055448..2055509 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935941.4591422-CDS-E-siliculosus-1a_M_contig7:2050801..20510111622935941.4591422-CDS-E-siliculosus-1a_M_contig7:2050801..2051011Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2050802..2051011 -
1696250856.6683013-CDS-E-siliculosus-1a_M_contig7:2050801..20510111696250856.6683013-CDS-E-siliculosus-1a_M_contig7:2050801..2051011Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2050802..2051011 -
1622935941.4766204-CDS-E-siliculosus-1a_M_contig7:2051832..20519191622935941.4766204-CDS-E-siliculosus-1a_M_contig7:2051832..2051919Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2051833..2051919 -
1696250856.6792738-CDS-E-siliculosus-1a_M_contig7:2051832..20519191696250856.6792738-CDS-E-siliculosus-1a_M_contig7:2051832..2051919Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2051833..2051919 -
1622935941.4941978-CDS-E-siliculosus-1a_M_contig7:2052373..20529041622935941.4941978-CDS-E-siliculosus-1a_M_contig7:2052373..2052904Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2052374..2052904 -
1696250856.6995819-CDS-E-siliculosus-1a_M_contig7:2052373..20529041696250856.6995819-CDS-E-siliculosus-1a_M_contig7:2052373..2052904Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2052374..2052904 -
1622935941.5146904-CDS-E-siliculosus-1a_M_contig7:2053465..20536181622935941.5146904-CDS-E-siliculosus-1a_M_contig7:2053465..2053618Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2053466..2053618 -
1696250856.7148516-CDS-E-siliculosus-1a_M_contig7:2053465..20536181696250856.7148516-CDS-E-siliculosus-1a_M_contig7:2053465..2053618Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2053466..2053618 -
1622935941.5315785-CDS-E-siliculosus-1a_M_contig7:2054042..20543001622935941.5315785-CDS-E-siliculosus-1a_M_contig7:2054042..2054300Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2054043..2054300 -
1696250856.734084-CDS-E-siliculosus-1a_M_contig7:2054042..20543001696250856.734084-CDS-E-siliculosus-1a_M_contig7:2054042..2054300Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2054043..2054300 -
1622935941.5839725-CDS-E-siliculosus-1a_M_contig7:2054607..20554471622935941.5839725-CDS-E-siliculosus-1a_M_contig7:2054607..2055447Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2054608..2055447 -
1696250856.7457535-CDS-E-siliculosus-1a_M_contig7:2054607..20554471696250856.7457535-CDS-E-siliculosus-1a_M_contig7:2054607..2055447Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig7 2054608..2055447 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig7.15189.1

>prot_E-siliculosus-1a_M_contig7.15189.1 ID=prot_E-siliculosus-1a_M_contig7.15189.1|Name=mRNA_E-siliculosus-1a_M_contig7.15189.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=693bp
MSVPRKVLLSVLAITHVLSLVPPLSTPPSRTTGLLRGRTATSNQSRRGSG
SSRVVRCRHRPRQYTVVGEGGAVAAGDSLSMAVGERKAAPGRSSISSRQR
RRSARRCHDPTAAPTTDGGGTGSSSSSSSSTTKGGAASQDSPAPPRDGGG
IFSSTTNGAAATDPAGPVNRGTFRELFRGRLPDWLLTRLEQLGFATPTLV
QRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVV
VPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWAD
PPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEDTRASLHEL
LARSLSPTHADEDEGEDEEEAARLAEVGAGRVTGAAAPVNRKLRDRQTVF
ASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPE
QKLAVLRALVKRELGVSASEAATTAATGAPAAAAAGVTAVATTAGEGDGP
SEGQAGGGGVDNTALQADTRGLVFALATKPLEGIAASLDKALGGRGSRGG
GGGESGGREQHQYQQQQQGKGRGEQPPQPPLAEFLREELGLNARADAMSL
FREGKTRLLVSTDMAARGLDVPEITHVFNLDLPLDGEGYVHRGGRAGRLG
RPGKVISLVTPQQEFVIRRLGNGIGVDIKKINLGSSRRRPKR*
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mRNA from alignment at E-siliculosus-1a_M_contig7:2049425..2055509-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig7.15189.1 ID=mRNA_E-siliculosus-1a_M_contig7.15189.1|Name=mRNA_E-siliculosus-1a_M_contig7.15189.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6085bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:2049425..2055509- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GTTGCAGCTGCAAGAGCTGCAGCAAGCACCAAGCCTTGGTGAACTAGCCT GCACCTGCTACCATGTCTGTGCCCCGAAAGGTTCTGCTGAGCGTCTTGGC GATCACGCATGTGCTCTCCCTTGTGCCTCCGTTGTCAACCCCACCTTCAC GGACGACAGGACTGCTTCGTGGCCGAACTGCAACCTCAAACCAGAGCAGG AGAGGCAGCGGCAGCAGCCGCGTCGTCAGATGTCGGCATCGACCACGCCA ATACACCGTGGTGGGAGAGGGGGGGGCGGTAGCTGCTGGGGATTCGCTAT CGATGGCGGTGGGCGAAAGAAAAGCTGCGCCCGGCCGCAGCAGCATCAGC AGCAGGCAACGTCGGCGAAGTGCACGCAGGTGTCATGATCCAACGGCAGC ACCCACCACGGACGGTGGTGGCACCGGTAGCAGCAGCAGCAGCAGCAGTA GCACAACAAAAGGAGGAGCGGCATCGCAAGATTCTCCTGCGCCACCACGA GACGGAGGAGGCATCTTCTCCTCCACGACCAACGGCGCCGCTGCCACCGA TCCCGCCGGTCCCGTCAACCGTGGAACGTTCCGCGAGTTGTTCCGGGGCC GCCTGCCGGACTGGCTGTTGACTCGCCTGGAGCAGCTCGGTTTTGCGACC CCGACGCTGGTGCAGCGCCAGGCCCTCGAGGTCATCCTGGGAGAGGGAAA GCACGACGCCGTGCTGCACGCGCAAACAGGCAGCGGCAAGACCCTTGCGT TTCTCCTGCCGCTGCTCGCCCGAGTCGATCCCTCGCGGGCGGCCGTCCAG GGGCTCGTCGTCGTGCCGACGCGCGAGCTGGGTCTCCAGGTGGCCGGCGT GGCCAAGCGTCTCGCCGCGGGAACGAGCTCGGGCAGGGAGAGCAAGATCC AGGTGCACCCTTTGCGCGGAAAGGCGTCGGCAACTTGCTGCGTCGGCGGT TCGACGGTCTTTTTTTGTACCGACAACATGAGTAGTGCTGGACGTTCTCA CACGTTTCCAACGTGGATCTGGTTTTTAACCCGGCTTGGCCAGCTTGCCG TTCCCAAATCGCGTAGCTGTACGTAGTAATTCGGTCGGAATCCCGATTTT CTCCTAAATAGAGAGCAGATGCATGCACCTTTTTTTTAGTGTTTTTGTTG CACCCCTCCAGGCAGACCACCTTACACCGAGAAACCTCACACACGCTCCC TCACCGTAGGTTATGTCCGTGCTCGAAGGGTCCAGCAACAAGCGGCAGCG CGCGTGGGCCTGGGCAGACCCCCCGCACATTGTCATCGGCAACCCGGAGA GCCTGACGCGGCTCGTCACGACCGGCGCCGTCCGCGTGAACGCCGTGTCG TACGTGGTCGTAGACGAGGTGGACGCGTGCCTGCTGTCGGAGGACACCCG TGCATCGCTGCACGAGCTCCTGGCCCGCAGCCTGTCCCCGACGCACGCTG ACGAGGACGAGGGAGAGGTACGCCCAGCGGCAACAGCAGCAGCAGCTGCT GCTGCTGTAATACATACGTACTCCAACAATGAGAACAACAGCAGCAGTAC CCACAAACAAGCAAATCTTGTTCATGGCCTGCAATCATTATTTTTTGAGA CTTATCACTTCAGACTCCCTGCTGTTAAAGCAATCTAGAGTGGCGGTCGT CCACCAAAGGGGTCCAAAACAAGGTCTAGAGCACGCACCGGAAGCAGCAT TTCACGTCGAGCAATAATAGTAAGACGGGATCAGACTTTCGGGTTTCCTC ATTCCTTTCTCTCGCCGTCGCCACCGCCGGGCTCTTTTTGTCATGTTTCT TAGTCTTCGAAAATATCCTTACAATCAAAGAGAGACTGCCATGCCGCAGT CCGTTTTTCTGACGACGAACCGGCCAATCATCGTCGAGCAGGACGAGGAG GAGGCGGCGAGACTGGCCGAGGTCGGGGCCGGGAGGGTGACGGGGGCGGC GGCGCCGGTGAACAGGAAGCTGAGGGACAGGCAGACGGTGTTCGCGAGCG CGACCGTGCCGCAGCACAACCACTTCATCCGGCAGTGCGTCCAGGTACGG CGGTATCTTCCATAGGTAGGCGCCGCAGCACCAATCACTTCGTCCGGCAG CGTAGTATCTTCGATAGACAGGCACCACAGCGCAACCACTTCATCCGGCA GTGCGTCCTGGTAGGGTGGTATCTTCCGTAGATAGGCATCACGTTTGGCC ACAATAAAAGTGCATCGCCCAGGGGCCAAATCAGGAACGGACGGAAGATT CCAGCATGAACCTCGGGGAGGAAGTTGGGGGGAAGAACATATGTCTTGTT CTCGGGGGAGAGAGGCGGAGGCCCACACGCACTTACAAAGCAATTTGCCA AACGTCCAAACTGACCCTATATTTCCGGCCAGAGACAACACTTTTGTGGT GACGATTACGAGTCCTCGATGAGACCTACGGACATGTATGGTGAATATTG CGTCCCGTATGCCTTTTCTCCTTTGTCCCGTTGACACCGTCCCAATCCTG CGTACCACGAACTCCCCGGGAGGAACAGACAATGTTTTCGTTCCGGCGTC GTTGACATCGCGGTATCCATGTACGGACGTGTTTTGCCAAACGCCGACGT CGCAGAAACAGTGGACGCTGACCGAGCCGGTTCACGTGCAAGTGCACGCC AAGGAGGCCATGCCGCCGTGCCTGTCCCACTACTACGTCGTGTGCCCGCC GGAGCAAAAGCTAGCGGTCCTGAGGGCCCTGGTCAAGCGAGAGCTCGGTG TATCAGCTTCTGAAGCAGCAACAACCGCGGCAACAGGAGCGCCAGCAGCA GCAGCAGCAGGTGTTACAGCCGTAGCGACCACGGCGGGGGAGGGAGACGG CCCATCGGAGGGTCAGGCAGGCGGGGGCGGTGTTGACAATACCGCCCTCC AGGCGGACACGAGGGGGCTCGTGTTCGCGCTGGCCACCAAGCCCCTCGAA GGAATCGCGGCGTCGCTCGACAAGGCGCTGGGTGGGCGCGGGAGCCGGGG CGGGGGTGGGGGCGAGAGCGGCGGGAGAGAGCAGCACCAGTACCAGCAGC AGCAGCAGGGGAAGGGTAGGGGTGAGCAACCGCCACAACCACCATTGGCG GAGTTTCTGCGAGAGGAGCTGGGCTTGAACGCGCGGGTGAGGACGACGGA GACAGGGGTCGACTCGCATGATGAACGTTCTCGGTTTAGATACTCTTCAT TCTATCTGACTGAACTTGGTTGAGATGCTGGGGGTCTGCTGTGTTTTCGG CACAGCCGCGCGAATGAGGCCGGTTCCATCTAGTGAGAAATTTCGTTTCT GGCACTTGTGGATCGCCTGGGAGGAACACACCGCTCTGTAGGTTCGTCAG GGGTGGTGGCAGCGGTGTAGAAGGCCGTGTAGCAGACGTTGAGCCGTGCC GGCCCTTGCACCGGGCAAGTGTGTGCATGACACCTAATCCGAGCGGCAGA AATCATGACACTGCATAGATGCACTTTTTTCAGCACCGCCCGCGACGTTT GCGTGTGTTCTTTGTCCTGACTTTCAAGCTCCACCGCTGCTGCTGCTGCT GCTGCGAACTCGTTTAAATCGGCGGGTGGTTGCTTGGCAGGCTGACGCGA TGTCGTTATTCCGCGAGGGCAAGACGCGCCTTCTCGTGTCGACGGATATG GCGGCGAGGGGCTTGGACGTGCCGGAGGTGAGGTCGACCTTTCTCCCCCC GCCTGTACCTTGGATGCGTTGGGATTGTGGCCGCCGAAGCCGCTTCCCTT GCTTTAAGGCGGGCTCGAAATTGTCCTAGAGGTCGCTCGCTAGGAATGCG ATGGAGACCCTGCGGGTAGAAGCCAGTACAGCCGTGTGTCAGCGTGAAAA AAAAAATTACAGCGACGGCAACAACCACCACACTCGCATCTAAGTTGCAG AAGTATTTCCGGTGTAAGTGCAACCAAGCGTTCATGTGTGTTTCGAGGCT ATCTCTTGGCATTTTCCCCCGACGATTGACCTCATTCAAGTGAAATGTTC ATGTAGCGGGCATTTTTTTTGTAGGTCCGGCAGCTGTAGTCTGTGAGTTT TTCTAGCCCCTTGCGTGGGATCGACGCAAGGAGCCCCAAGCATCTGGAAT GTACCTTTTCGCCTTTTGGCCGGATAGCATCGGTACTATGTACGCAGTGC GACGCGGCCCGTTCCTGTAGATGACACAGTAGTGGTGAGAGCGCTTTGAT GGGCCCTTTCGCTTGGTGTTCCCCCCCCCGCCCCCACAGTGACGCGCGTC TTCGGAGCACGATTGACGAACATGCTTGCTATGGCGAAAACCCCTACGAG ATGACTCGAAAGAGGAAACCCCGTTGCGATTGTTGGTATTGGCGCCACCT TCGGGGAAGTCAGTTGCTCGAGACAGGTGCCCCGTACGCCGCTCTTTACA CCGATGAAGACCCAGATTTTCCCGATTTTTGCCGCCGAAGTCTACCGCCC CAACAGCACTAACCCACTTCCTGCATCGTACTTGTTGCGGCCCGGTAGAT TACGCACGTTTTCAACCTTGATCTGCCGCTGGACGGGGAGGGGTACGTGC ACCGAGGGGGACGTGCCGGGAGGCTAGGCAGGCCGGGCAAGGTCATCTCG CTCGTGACCCCCCAGCAAGAGTTCGTCATACGGCGACTGGGAAACGGGAT CGGGGTGGACATCAAGAAGATAAACCTGGGGTCCTCGAGGAGGAGGCCGA AACGGTAACCCGAGCCTCTGCCTAGCTTGTGTTCCTCGTATTTTCTTCGC TGCAGAGCCCTTTAGTGATGGGTCGGCAACGATTCCTTGGGGCCGATTGT ATACCGTATATGACACAAGATAACACACCCCCTGGCCCGATTTTCAAAGC TCGATTACTCGACGACGAAGGATACATAAACAAAATGATACATTTTCGAA AAGCTCTCAACGAGACGGTTCCAACGCCGCCGTTTTCGGCGCTGTGAGTC TTCCGGCTGTTGAGAAATCGAGCTTTGAAAATCGGTCAAGGGGGTGTGTT ATCTTGTGTCATATACGGTAACCTCGCAGAGAGACTAGGGGATACTGGAG TTTGCGAAGCAACAGCAGCCTGGACCTTCCTATGTAGTTTTCGTGCTAGC GCTTCAGCGCTGGGGGGTCCTTTTTGTGCTGGATAAGCAACGGTTCCTTG GGGCTAGTTGGGTAACCTCGCAGAGAGACGCAAAAGATACTGGGCTTGGC GAAACAACGCCCTGCCTAGCTTTCTTGCTGGTGCTTCTGCGCTGGGGAAT TGAATCAGCAACGGTTCCTTGGACTATTACTAGTGCGGTAAGCTCGCAGA CAGAGGAAAAGAGACAGGACTGGGCCCCGCGACATTACAGGGGCCGAAGT GTGAGCCTGAACCTCCTTCTTTCCTCTTCCTCGTTTGCTGAGGAGAGCCC TCCTAGGTTCGGATCAGCAGGGTGTGCTAATGCTCGATCGACAACGAGGT ATATCTTGCGTTGGATCAACAAGGTTTGCTTGGGCTGCTCCTGCTGACGA TGAAAAGGAACAACAGCAGTTTTCGGGAGATGTGACACCTTGATCTGAGC CTTGACCTTCTTTCTTTTCCTCTGCGGAGGAGAAGTCCTGTGTTGGGAGT GGTAGGGGTTTTCAAGCAGGGTCCCCACGCAAGCGCGCGGATGAATGACG CGAATAAATTCTTCACCGATATGGTCGACGCGGGTGGCGGCGGCGGCGAC GGGGGGGGACTTGGAACAAGAGCACGCAAGCCGGTAGGGCAACGAAGATC GAGGGAACCGGCCGCCAGACAAAGGTGTTGGGGCTAGTGGAATACAAGGG GCCGGGTGAACCTTGTTGGTGCTTCCTCTCGTTAAAGCCTCACGAGCTAA AGAGTTGTTGATTCGTGGATAGAGTTTGGGGTCAACACTTTCCTGCCCGC GAACCTTGTTTATTCTTGTCACCGCCTTCGTAACCGACCCTCGCTGGGTG TATTATCGTGTGTTCTATCTACACACACGAGTGTGGAGCCTCAAGGAGAG CGAGGCTTCTCCATGAGACTTCGACTGAAGGAGAGATAGACGAGACTGAG AGGCAGAGAATAGGTCGCATGCAAACAACAACAAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig7:2049425..2055509-

>mRNA_E-siliculosus-1a_M_contig7.15189.1 ID=mRNA_E-siliculosus-1a_M_contig7.15189.1|Name=mRNA_E-siliculosus-1a_M_contig7.15189.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4158bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:2049425..2055509- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCTGTGCCCCGAAAGGTTCTGCTGAGCGTCTTGGCGATCACGCATGT
GCTCTCCCTTGTGCCTCCGTTGTCAACCCCACCTTCACGGACGACAGGAC
TGCTTCGTGGCCGAACTGCAACCTCAAACCAGAGCAGGAGAGGCAGCGGC
AGCAGCCGCGTCGTCAGATGTCGGCATCGACCACGCCAATACACCGTGGT
GGGAGAGGGGGGGGCGGTAGCTGCTGGGGATTCGCTATCGATGGCGGTGG
GCGAAAGAAAAGCTGCGCCCGGCCGCAGCAGCATCAGCAGCAGGCAACGT
CGGCGAAGTGCACGCAGGTGTCATGATCCAACGGCAGCACCCACCACGGA
CGGTGGTGGCACCGGTAGCAGCAGCAGCAGCAGCAGTAGCACAACAAAAG
GAGGAGCGGCATCGCAAGATTCTCCTGCGCCACCACGAGACGGAGGAGGC
ATCTTCTCCTCCACGACCAACGGCGCCGCTGCCACCGATCCCGCCGGTCC
CGTCAACCGTGGAACGTTCCGCGAGTTGTTCCGGGGCCGCCTGCCGGACT
GGCTGTTGACTCGCCTGGAGCAGCTCGGTTTTGCGACCCCGACGCTGGTG
CAGCGCCAGGCCCTCGAGGTCATCCTGGGAGAGGGAAAGCACGACGCCGT
GCTGCACGCGCAAACAGGCAGCGGCAAGACCCTTGCGTTTCTCCTGCCGC
TGCTCGCCCGAGTCGATCCCTCGCGGGCGGCCGTCCAGGGGCTCGTCGTC
GTGCCGACGCGCGAGCTGGGTCTCCAGGTGGCCGGCGTGGCCAAGCGTCT
CGCCGCGGGAACGAGCTCGGGCAGGGAGAGCAAGATCCAGATGTCTGTGC
CCCGAAAGGTTCTGCTGAGCGTCTTGGCGATCACGCATGTGCTCTCCCTT
GTGCCTCCGTTGTCAACCCCACCTTCACGGACGACAGGACTGCTTCGTGG
CCGAACTGCAACCTCAAACCAGAGCAGGAGAGGCAGCGGCAGCAGCCGCG
TCGTCAGATGTCGGCATCGACCACGCCAATACACCGTGGTGGGAGAGGGG
GGGGCGGTAGCTGCTGGGGATTCGCTATCGATGGCGGTGGGCGAAAGAAA
AGCTGCGCCCGGCCGCAGCAGCATCAGCAGCAGGCAACGTCGGCGAAGTG
CACGCAGGTGTCATGATCCAACGGCAGCACCCACCACGGACGGTGGTGGC
ACCGGTAGCAGCAGCAGCAGCAGCAGTAGCACAACAAAAGGAGGAGCGGC
ATCGCAAGATTCTCCTGCGCCACCACGAGACGGAGGAGGCATCTTCTCCT
CCACGACCAACGGCGCCGCTGCCACCGATCCCGCCGGTCCCGTCAACCGT
GGAACGTTCCGCGAGTTGTTCCGGGGCCGCCTGCCGGACTGGCTGTTGAC
TCGCCTGGAGCAGCTCGGTTTTGCGACCCCGACGCTGGTGCAGCGCCAGG
CCCTCGAGGTCATCCTGGGAGAGGGAAAGCACGACGCCGTGCTGCACGCG
CAAACAGGCAGCGGCAAGACCCTTGCGTTTCTCCTGCCGCTGCTCGCCCG
AGTCGATCCCTCGCGGGCGGCCGTCCAGGGGCTCGTCGTCGTGCCGACGC
GCGAGCTGGGTCTCCAGGTGGCCGGCGTGGCCAAGCGTCTCGCCGCGGGA
ACGAGCTCGGGCAGGGAGAGCAAGATCCAGGTTATGTCCGTGCTCGAAGG
GTCCAGCAACAAGCGGCAGCGCGCGTGGGCCTGGGCAGACCCCCCGCACA
TTGTCATCGGCAACCCGGAGAGCCTGACGCGGCTCGTCACGACCGGCGCC
GTCCGCGTGAACGCCGTGTCGTACGTGGTCGTAGACGAGGTGGACGCGTG
CCTGCTGTCGGAGGACACCCGTGCATCGCTGCACGAGCTCCTGGCCCGCA
GCCTGTCCCCGACGCACGCTGACGAGGACGAGGGAGAGGTTATGTCCGTG
CTCGAAGGGTCCAGCAACAAGCGGCAGCGCGCGTGGGCCTGGGCAGACCC
CCCGCACATTGTCATCGGCAACCCGGAGAGCCTGACGCGGCTCGTCACGA
CCGGCGCCGTCCGCGTGAACGCCGTGTCGTACGTGGTCGTAGACGAGGTG
GACGCGTGCCTGCTGTCGGAGGACACCCGTGCATCGCTGCACGAGCTCCT
GGCCCGCAGCCTGTCCCCGACGCACGCTGACGAGGACGAGGGAGAGGACG
AGGAGGAGGCGGCGAGACTGGCCGAGGTCGGGGCCGGGAGGGTGACGGGG
GCGGCGGCGCCGGTGAACAGGAAGCTGAGGGACAGGCAGACGGTGTTCGC
GAGCGCGACCGTGCCGCAGCACAACCACTTCATCCGGCAGTGCGTCCAGG
ACGAGGAGGAGGCGGCGAGACTGGCCGAGGTCGGGGCCGGGAGGGTGACG
GGGGCGGCGGCGCCGGTGAACAGGAAGCTGAGGGACAGGCAGACGGTGTT
CGCGAGCGCGACCGTGCCGCAGCACAACCACTTCATCCGGCAGTGCGTCC
AGAAACAGTGGACGCTGACCGAGCCGGTTCACGTGCAAGTGCACGCCAAG
GAGGCCATGCCGCCGTGCCTGTCCCACTACTACGTCGTGTGCCCGCCGGA
GCAAAAGCTAGCGGTCCTGAGGGCCCTGGTCAAGCGAGAGCTCGGTGTAT
CAGCTTCTGAAGCAGCAACAACCGCGGCAACAGGAGCGCCAGCAGCAGCA
GCAGCAGGTGTTACAGCCGTAGCGACCACGGCGGGGGAGGGAGACGGCCC
ATCGGAGGGTCAGGCAGGCGGGGGCGGTGTTGACAATACCGCCCTCCAGG
CGGACACGAGGGGGCTCGTGTTCGCGCTGGCCACCAAGCCCCTCGAAGGA
ATCGCGGCGTCGCTCGACAAGGCGCTGGGTGGGCGCGGGAGCCGGGGCGG
GGGTGGGGGCGAGAGCGGCGGGAGAGAGCAGCACCAGTACCAGCAGCAGC
AGCAGGGGAAGGGTAGGGGTGAGCAACCGCCACAACCACCATTGGCGGAG
TTTCTGCGAGAGGAGCTGGGCTTGAACGCGCGGAAACAGTGGACGCTGAC
CGAGCCGGTTCACGTGCAAGTGCACGCCAAGGAGGCCATGCCGCCGTGCC
TGTCCCACTACTACGTCGTGTGCCCGCCGGAGCAAAAGCTAGCGGTCCTG
AGGGCCCTGGTCAAGCGAGAGCTCGGTGTATCAGCTTCTGAAGCAGCAAC
AACCGCGGCAACAGGAGCGCCAGCAGCAGCAGCAGCAGGTGTTACAGCCG
TAGCGACCACGGCGGGGGAGGGAGACGGCCCATCGGAGGGTCAGGCAGGC
GGGGGCGGTGTTGACAATACCGCCCTCCAGGCGGACACGAGGGGGCTCGT
GTTCGCGCTGGCCACCAAGCCCCTCGAAGGAATCGCGGCGTCGCTCGACA
AGGCGCTGGGTGGGCGCGGGAGCCGGGGCGGGGGTGGGGGCGAGAGCGGC
GGGAGAGAGCAGCACCAGTACCAGCAGCAGCAGCAGGGGAAGGGTAGGGG
TGAGCAACCGCCACAACCACCATTGGCGGAGTTTCTGCGAGAGGAGCTGG
GCTTGAACGCGCGGGCTGACGCGATGTCGTTATTCCGCGAGGGCAAGACG
CGCCTTCTCGTGTCGACGGATATGGCGGCGAGGGGCTTGGACGTGCCGGA
GGCTGACGCGATGTCGTTATTCCGCGAGGGCAAGACGCGCCTTCTCGTGT
CGACGGATATGGCGGCGAGGGGCTTGGACGTGCCGGAGATTACGCACGTT
TTCAACCTTGATCTGCCGCTGGACGGGGAGGGGTACGTGCACCGAGGGGG
ACGTGCCGGGAGGCTAGGCAGGCCGGGCAAGGTCATCTCGCTCGTGACCC
CCCAGCAAGAGTTCGTCATACGGCGACTGGGAAACGGGATCGGGGTGGAC
ATCAAGAAGATAAACCTGGGGTCCTCGAGGAGGAGGCCGAAACGGTAAAT
TACGCACGTTTTCAACCTTGATCTGCCGCTGGACGGGGAGGGGTACGTGC
ACCGAGGGGGACGTGCCGGGAGGCTAGGCAGGCCGGGCAAGGTCATCTCG
CTCGTGACCCCCCAGCAAGAGTTCGTCATACGGCGACTGGGAAACGGGAT
CGGGGTGGACATCAAGAAGATAAACCTGGGGTCCTCGAGGAGGAGGCCGA
AACGGTAA
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