mRNA_E-siliculosus-1a_M_contig7.15176.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: A0A6H5LN99_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN99_9PHAE) HSP 1 Score: 906 bits (2342), Expect = 0.000e+0 Identity = 520/639 (81.38%), Postives = 535/639 (83.72%), Query Frame = 1
Query: 1 MTPPQEPDRLDKPCGHQNQGQQHNRNQAETGRXXXXXXXXXXXXXXXXXXXXXXQLPEPLSGASPVLVSRRLLSPEDGEPMLSLPLERRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPQPHANQTSYYSTEMGRRRRRQLLPGTARFPLRWSGGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGEYTCSEVEPRCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGWPKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGETHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCEKHGGTAAYPPAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIAPGK-----KEEPAVMDRINEDESGKSAAEDEVRIGEEGGRWSGKGPREGPGLRDDG 1902
MTPPQEPD LDKPCGHQNQGQQHNR+QAETGR Q EP SGASPVLVSRRLLSPEDGEPMLSLPLERRRP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LPQ HANQTSY QLLPGTAR PLRWS GTHFVYAHVGTPPQRVSLI+DTGSF LAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHG+YTCSE EPRCTYRQSYSEGSAWTATQMVDV RLGGE LSEEDGGGEGNGG+GWPKLSFGCIRKQ G+FDKQEPDGIIGMGPN+ SPAWSLTARESPQ++KFSICFSENGGNLVLGGYDPELLVPGASHQYTTA FARGFFAVEV GVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPG SFCL+LTPPEAAELPVVSFTLADGVEVRVSPLQYLEKK T G+ HKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE+ GGTAAYPPAPA XXXXXXXX KEE A MDR N+DESG+SA E+E RIGE+GGR SGKGPREGPGLRDDG
Sbjct: 1 MTPPQEPDPLDKPCGHQNQGQQHNRHQAETGRYRSTQQHQQQ------------QGQEPFSGASPVLVSRRLLSPEDGEPMLSLPLERRRPGDNASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----LPQSHANQTSYXXXXXXXXXXXQLLPGTARIPLRWSEGTHFVYAHVGTPPQRVSLILDTGSFMLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGDYTCSEFEPRCTYRQSYSEGSAWTATQMVDVFRLGGEGLSEEDGGGEGNGGYGWPKLSFGCIRKQLGMFDKQEPDGIIGMGPNVISPAWSLTARESPQDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAQFARGFFAVEVLGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGNSFCLKLTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKETAGKPHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCER-GGTAAYPPAPATLADDGGGSDGEAGGNEGREVGHGXXXXXXXXXXXXXXXXXXXKEESAAMDRKNDDESGQSAGEEEARIGEDGGRRSGKGPREGPGLRDDG 622
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: D7G3T7_ECTSI (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T7_ECTSI) HSP 1 Score: 536 bits (1380), Expect = 2.270e-184 Identity = 260/301 (86.38%), Postives = 265/301 (88.04%), Query Frame = 1
Query: 409 SLPQPHANQTSYYSTEMGRRRRRQLLPGTARFPLRWSGGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGEYTCSEVEPRCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGWPKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGE 1311
SLPQPHANQTSYYS EMGRRRRRQLLPGTARFPLRWS GTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHG+YTCSE EP+CTY SY EG WTA QMVDVLRLGGEELSEEDGGGEGNGG+ WPKLSFGCIRKQSGLFDKQ+ +KFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGE
Sbjct: 52 SLPQPHANQTSYYSKEMGRRRRRQLLPGTARFPLRWSEGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGDYTCSEFEPKCTYSHSYREGRGWTAIQMVDVLRLGGEELSEEDGGGEGNGGYDWPKLSFGCIRKQSGLFDKQD--------------------------RKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGE 326
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 316 bits (810), Expect = 1.970e-92 Identity = 168/378 (44.44%), Postives = 218/378 (57.67%), Query Frame = 1
Query: 472 RRQLLPGTARFPLRWSGGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGEYTCSEVEPRCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGWPKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGETHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 1605
RR L PL GTHF Y + GTPPQRVS+I+DTGS AFPC GC C + P WD S ++ ++C++CHG + C + + RC + Q YSEGS+WTA Q+ DVL +G L + + + + FGCI Q+GLF Q DGI+GM + ++ W L + + FS+CF +NGG +VLGGYD L PG YT + + G+F V+V + + SI A+ +F G G IVDSGTTD YLP VA FS AWE ATG PYA C FC+ LT E LP ++ + G+EV V P Y++ G YAPRIYLTES G VLGANVMLD NV+FD N +GFA+ C+
Sbjct: 107 RRSLYLSFEDTPLFPGWGTHFAYVYAGTPPQRVSVIIDTGSHFTAFPCSGCKNCGSHT-DPHWDQSKSTSSHIVTCEDCHGSFRC-QRDKRCGFSQRYSEGSSWTAYQVEDVLWVGELTLQQSEKINHDESAYA-VEFMFGCIESQTGLFKTQLADGIMGMSADSHTLVWQLAKAGKIKERTFSLCFGKNGGTMVLGGYDNRLNKPGHEMVYTPSTKSSGWFTVKVTDITVNQVSI--AKDAAIFQKGKGIIVDSGTTDTYLPKSVAKGFSAAWERATGSPYANCKDNHFCMILTSAELEALPTITIHMDGGLEVNVRPSGYMDALGKDNA-----YAPRIYLTESMGGVLGANVMLDHNVVFDFDNHSVGFAEGVCD 474
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 293 bits (750), Expect = 1.500e-87 Identity = 163/372 (43.82%), Postives = 211/372 (56.72%), Query Frame = 1
Query: 505 PLRWSGGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDE---CHGEYTCSEVEPRCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGWPKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGETHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCEKH 1611
PL GTHF Y + GTPPQR S+I++TGS AFPC C C + P+WDP S+TA ++CDE CHG Y C + + +C + Y+E S+W A Q+ D+L +G EL+ D + F +FGCI +GLF Q DGI+G+ + + L +KFS+CFSE GG +V+GGYDP L PG+ QYT + V+V V L G SI T ++ F GTG V SGTTDMYLP VA+ FS AWEAATG PYA C FC+ T + LPV++ + GVEV V P Y++ + YAPRIYLTES G LGA + D NV+FD N +GFAD C+ H
Sbjct: 99 PLFRGYGTHFAYIYAGTPPQRASVIINTGSHFSAFPCSECKNCGNHT-DPYWDPSQSSTAHIVTCDETERCHGAYRC-QSDKKCVLTERYTERSSWRAKQVDDLLWVG--ELTLSDSQKHDDSAFS-VDFTFGCIESLTGLFRTQLADGIMGLNADSRTLITQLATAGKISERKFSLCFSETGGTMVIGGYDPLLNKPGSEMQYTPSTGETSAPTVKVTDVTLNGVSITTDASV--FQKGTGIKVVSGTTDMYLPRAVAEGFSAAWEAATGSPYATCKSNEFCMTRTTADLETLPVLTIHMDGGVEVNVQPEAYMD----ASSDDENAYAPRIYLTESMGGELGAILFRDHNVVFDYDNHVVGFADGACDYH 459
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 266 bits (680), Expect = 1.040e-77 Identity = 153/367 (41.69%), Postives = 201/367 (54.77%), Query Frame = 1
Query: 505 PLRWSGGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGEYTCSEVEPRCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGWPKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGETHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 1605
PL GTH Y +VGTPPQRVS+I+DTGS AFPC GC C + + +WD S+TA C +CHG + C RC + QSYSEGS+W+A Q++D L G L + FGCI Q+GLF+ Q DGI+GM + + W L + +KFS+CF GG +VLGG +P L+ A QYT G+F V++ + +GG SI ++ G G IVDSGTTD YLP AD F W+A TG Y P ++L+ + A LP +F A GV V V P Y++ + Y PR+YL E GAVLGAN M D +V+FD AN+R+GFA A C+
Sbjct: 7 PLIPGYGTHIAYVYVGTPPQRVSVILDTGSHFTAFPCKGCKACGDHTDS-YWDFDLSSTATLTKCPDCHGNFNCG-ANQRCVFSQSYSEGSSWSAFQVIDKLYTGLTTLQDTPPDDAALS----IDFMFGCINSQTGLFNTQLADGIMGMSVSEFTLVWQLHQKGLLAQEKFSLCFDYGGGVMVLGGVEP--LLRTAPMQYTPNLHDEGWFTVDLQDILIGGESINVDPAQ--YNRGKGVIVDSGTTDTYLPSACADGFRAQWQALTGMAYDNKP-----MKLSKAQFAALPTFTFVFAGGVRVDVKPEAYMD---VAADHDGAGYTPRMYLDERDGAVLGANFMRDHDVVFDHANKRVGFAPANCD 355
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 264 bits (675), Expect = 6.460e-74 Identity = 160/385 (41.56%), Postives = 206/385 (53.51%), Query Frame = 1
Query: 523 GTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGEYTCSEVEPRCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGWPKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGETH----------KTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCEKHGGTAAYPPAPAA 1647
GTH Y +VGTPPQRVS+I+DTGS AFPC GC C + P+WD AS+TA +C C G +TC + RC Y QSYSEGS+W A Q++D + G ++ G G+ +FGCI Q+GLF+ Q DGI+GM + ++ W+L S+CF GG +VLGG DP L+ A Q+T + G+F V++ V +GG SI +++ G G IVDSGTTD YLP A F AW AATG Y+ S L E A LP ++F G V V P Y+ + T K+Y A R+YL E+ GAVLGAN M D +V FD AN R+GFA A C AA A AA
Sbjct: 8 GTHIAYLYVGTPPQRVSVIIDTGSHLTAFPCKGCQACGKHT-DPYWDFAASSTAKITTCAACKGTFTCGSQD-RCIYSQSYSEGSSWHAFQVLDTVFAGPASAADVAPAAAAASGVGF---AFGCIDSQTGLFNTQLADGIMGMSASESTLVWTLHRAHRVPALALSLCFGTGGGAMVLGGSDP--LLHTAPMQFTPSLKRTGWFTVDLIDVQIGGASI--GAPAAVYARGKGAIVDSGTTDTYLPEACAARFRAAWRAATGRDYS----ESAPQRLARAELAALPALTFVFRGGARVDVLPEAYMVARAALTLTRLAASAQEKVGKSYVA-RVYLDEANGAVLGANFMRDHDVFFDQANSRVGFAPANCNWTALEAAKAAAVAA 378
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: A0A8J2SW55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW55_9STRA) HSP 1 Score: 246 bits (628), Expect = 6.280e-71 Identity = 154/415 (37.11%), Postives = 212/415 (51.08%), Query Frame = 1
Query: 412 LPQPHANQTSYYSTEMGRRRRRQLLPGTAR----FPLRWSGGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGEYTCSEVEPRCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGW--PKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYD------PELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFC---LELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGETHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCEKH 1611
LP+ H++ + RRR+L A PL GTH+ + +VGTP QRVS+IVDTGS AFPC GC C + P+++P S+T L C +C C V C QSY+EGS+W A QM D +GG++ S GE W FGC ++GLF Q+ DGI+GM + + ++ + + F++CF + GG + LGG D P VP A + G+F V++ V L G+SI E+ ++ G GTIVDSGTTD YLP A+ F AW AA G P + L T +AA+ P +++ A GV+V V Y+EK G + PR+YLTE++G VLGAN M D + FD R+GFA A C+ H
Sbjct: 56 LPKAHSSTRLHKRNISTVIRRRRLQAPDAHQGGLTPLFMGIGTHYAHVYVGTPAQRVSVIVDTGSHHTAFPCAGCKSCGKHT-DPYFEPSRSSTLVRLDCSKCVAAARC--VAKTCQVSQSYTEGSSWKAVQMKDNYYVGGDDASAPPRAGEK-----WIATPFVFGCQTYETGLFRTQKADGIMGMSMHAQTLVPTMRSANKLGHNSFAMCFMQGGGTMALGGVDTRIHKEPMQFVPLAKNS--------GWFTVQLKDVLLNGKSIGVPEST--WNTGKGTIVDSGTTDTYLPRRAAEQFKRAWHAAMG------PSPKYANSKLAYTAAQAAKFPTITYVFAGGVKVDVEGKAYMEKAGAGR------WVPRVYLTEASGTVLGANFMEDHDCFFDAERRRVGFARADCDYH 440
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: A0A7S3YC94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC94_HETAK) HSP 1 Score: 236 bits (603), Expect = 8.110e-67 Identity = 146/361 (40.44%), Postives = 196/361 (54.29%), Query Frame = 1
Query: 523 GTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGEYTCSEVEPRCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGWPKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKGTTGETHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 1605
GTHF Y +VGTPPQRVS+IVDTGS AFPC GC C + P++D +S+T +L C EC S +C + QSYSEGS+W A Q++D G E +E N L FGC ++GLF Q DGI+GM + S +L + + F++CF+E GG + LGG D L + Q+ G+F V + + +GG + + ++ G GTIVDSGTTD YL VA+ F W AA+G Y+ T L+ + A LP V++ +GVEV V P Y+EK GT Y PRIYL ES+G VLGAN M +V FD N R+GFA++ C+
Sbjct: 67 GTHFAYVYVGTPPQRVSVIVDTGSHYTAFPCKGCSGCGSHT-DPYFDLSSSSTGHQLGCHECQST---SCASGKCQFSQSYSEGSSWHAYQVIDRFYTGVEVFAEIPAA---NADLAIDFL-FGCQSSETGLFRTQLADGIMGMSMSHFSLVDALHKAGAVGHNNFAMCFNEEGGVMSLGGVDTRL--HDSPMQFVPLTQNTGWFTVSLKEIRVGGEKLNVGASN--YNGGKGTIVDSGTTDTYLNRHVANEFKAKWHAASGMTYSNAAKT-----LSEAQLAALPSVTYVFGNGVEVVVRPESYMEKTGTNK------YTPRIYLDESSGNVLGANFMDRHDVFFDEENGRVGFAESSCD 404
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 230 bits (586), Expect = 9.340e-64 Identity = 137/374 (36.63%), Postives = 199/374 (53.21%), Query Frame = 1
Query: 505 PLRWSGGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCDECHGEYTCSEVEPRCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGWPKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYDPELLVPGASHQ----YTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTL----ADGVEVRVSPLQYLEKKGTTGETHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARC 1602
PL GTH+ + +VGTPPQRVS+I+DTGS AFPC GC C + P + P S+T + L C+ C C V+ +C + QSY+EGS+W A QM DVL LGG D + FGC ++GLF Q DGI+G+ + + + + + F++CF + GG + +GG D A HQ + + G+F V++ G+ +G S+ + ++ G G IVDSGTTD YLP + A AF +AW + +G Y + + L A +P ++F + VEV + P Y+E++G+ Y PR+YLTE +G VLGAN M D NVLFD ++R+GFA + C
Sbjct: 79 PLFEGIGTHYAFIYVGTPPQRVSVIMDTGSHLTAFPCEGCKTCGSHT-DPHFKPSGSSTNSYLPCNACKAGARC--VKGKCEFGQSYTEGSSWKAHQMEDVLWLGGSSSDTHDPASSIGHALA-VRFMFGCQFSETGLFRTQRADGIMGLSSSPTTLIPQVKNANLIEAKTFALCFMKGGGMMTIGGAD------SAIHQEPMKFVPLAKSSGWFTVKLKGLRVGDVSLSVSGNS--YNSGKGVIVDSGTTDTYLPKKAAGAFKKAWRSLSGREYG-----NGKMTLDAENFARIPTITFVFQGAHGEDVEVHMRPNAYMEQQGSDK------YVPRVYLTEGSGMVLGANFMQDHNVLFDAEHKRVGFARSDC 429
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Match: A0A7R9U4S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4S4_9STRA) HSP 1 Score: 212 bits (539), Expect = 3.460e-58 Identity = 142/379 (37.47%), Postives = 197/379 (51.98%), Query Frame = 1
Query: 505 PLRWSGGTHFVYAHVGTPPQRVSLIVDTGSFTLAFPCVGCDKCRPRSRTPFWDPGASATAAELSCD----ECHGEYTCSEVEP----RCTYRQSYSEGSAWTATQMVDVLRLGGEELSEEDGGGEGNGGFGWPKLSFGCIRKQSGLFDKQEPDGIIGMGPNINSPAWSLTARESPQNQKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAHFARGFFAVEVFGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGTSFCLELTPPEAAELPVVSFTLA-DG----VEVRVSPLQYLEKKGTTGETHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARC 1602
PL GTHF Y VGTP QRVS+IVDTGS AFPC GC+ C + P+++ S+++ EL C +C G S + +C QSY+EGS W+A Q+ D++ +GGE +E P +FGC ++GLF Q DGI+GM + ++ A L + ++ FS+CF GG + LGG D +L + + RG++ VEV + +G + A+++ G G IVDSGTTD YLP A F EAW+ ATG + T+ L+L+ E LP + L+ DG V V +SP+ Y+E + Y RIYL E G VLGAN M +V FD RIGFA + C
Sbjct: 36 PLFQGYGTHFAYLWVGTPAQRVSVIVDTGSGITAFPCNGCNGCGSHT-DPYFNADKSSSSHELQCQTQRQDCVGADGKSSAQSCSNGKCILSQSYAEGSRWSAHQVTDMVWVGGETKTEVAAAP-----LAIP-YTFGCQTSETGLFITQLADGIMGMMISESNLASQLQIQGKLSSRSFSLCFVLGGGVMTLGGVDTQLHIEDMRYVKNVQK-GRGWYTVEVLDIFIGDERVAVAKSVYDNGSGKGMIVDSGTTDTYLPRACATKFKEAWQRATGMRF-----TNNALQLSRSEMLALPKIHVHLSGDGGNPPVVVDMSPIDYMEVQNDFS------YIARIYLDEPQGGVLGANFMRSHDVHFDPEANRIGFAPSDC 395 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig7.15176.1 >prot_E-siliculosus-1a_M_contig7.15176.1 ID=prot_E-siliculosus-1a_M_contig7.15176.1|Name=mRNA_E-siliculosus-1a_M_contig7.15176.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=666bp MTPPQEPDRLDKPCGHQNQGQQHNRNQAETGRHRSTQQHQHQSHHHHHHQback to top mRNA from alignment at E-siliculosus-1a_M_contig7:1950916..1959388+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig7.15176.1 ID=mRNA_E-siliculosus-1a_M_contig7.15176.1|Name=mRNA_E-siliculosus-1a_M_contig7.15176.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8473bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:1950916..1959388+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig7:1950916..1959388+ >mRNA_E-siliculosus-1a_M_contig7.15176.1 ID=mRNA_E-siliculosus-1a_M_contig7.15176.1|Name=mRNA_E-siliculosus-1a_M_contig7.15176.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3996bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:1950916..1959388+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |