mRNA_E-siliculosus-1a_M_contig7.15169.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15169.1 vs. uniprot
Match: D7FN77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN77_ECTSI) HSP 1 Score: 764 bits (1974), Expect = 4.580e-274 Identity = 397/407 (97.54%), Postives = 404/407 (99.26%), Query Frame = 1
Query: 1 MAEVDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANRAVGDNWKKLCTLSGPASDAATAVDASRGAVDQEVHSLAAVRMEEKKHDSPKEHILANTTHIVRADPAPADDSFIETLSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKKDASASAAFQEISPSISLDDLLANKKDLDEVLLFKSTHTLRLDESSTVEAKSSHKSHKIEVKGRMNITSIKRHFGSSSKTVTFRTATEAEMNNTVEEITDCIYTRGGMQTAVTGRMSTDSRSSFGSSFNSTGSGSTKLPPKE 1221
MAE+DCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSAN A+GDNWKK+CTLSGPA+DAA AVDASRGAVDQEVHSLAAVRMEEKKHDS KEHILANTTHIVRADPAPADDSFIETLSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKKDASASAAFQEISPSISLDDLLANKKDLDEVL+FKSTHTLRLDESSTVEAKSSHKSHKIEVKG+MNITSIKRHFGSSSKTVTFRTATEAEMNNTVEEITDCIYTRGGMQTA+TGRMSTDSRSSFGSSFNSTGSGSTKLPPKE
Sbjct: 138 MAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANHAIGDNWKKMCTLSGPANDAAKAVDASRGAVDQEVHSLAAVRMEEKKHDSSKEHILANTTHIVRADPAPADDSFIETLSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKKDASASAAFQEISPSISLDDLLANKKDLDEVLMFKSTHTLRLDESSTVEAKSSHKSHKIEVKGKMNITSIKRHFGSSSKTVTFRTATEAEMNNTVEEITDCIYTRGGMQTALTGRMSTDSRSSFGSSFNSTGSGSTKLPPKE 544
BLAST of mRNA_E-siliculosus-1a_M_contig7.15169.1 vs. uniprot
Match: A0A6H5L7U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7U6_9PHAE) HSP 1 Score: 730 bits (1884), Expect = 1.260e-261 Identity = 382/405 (94.32%), Postives = 395/405 (97.53%), Query Frame = 1
Query: 1 MAEVDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANRAVGDNWKKLCTLSGPASDAATAVDASRGAVDQEVHSLAAVRMEEKKHDSPKEHILANTTHIVRADPAPADDSFIETLSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKKDASASAAFQEISPSISLDDLLANKKDLDEVLLFKSTHTLRLDESSTVEAKSSHKSHKIEVKGRMNITSIKRHFGS--SSKTVTFRTATEAEMNNTVEEITDCIYTRGGMQTAVTGRMSTDSRSSFGSSFNSTGSGSTKL 1209
MAE+DCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAW+AVTAKLGEVFAKMK+LEGERRTTLREFMLSANRA+GDNWK LCTL GPASDAATAVDA+RGAVDQEVHSLAAVRMEEKKH++ KEH+LANTTHIVRADPAPADDSFIETLSAPLESPLVR MMMIERREGKAIGSKY+AGLMVLSWDGFLHFFDIPSSSTVK+DASASAAFQEISPSISLDDLLANKKDLDEVL+FKSTHTL DESSTVEAKSSHKSHKIEVKGR NITSIKRHFGS +SKTVTFRTATEAEMNN VEEITDCIYTRGGMQTAVTGRMSTDSRSSFGSSF+STGSGSTKL
Sbjct: 138 MAEMDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWDAVTAKLGEVFAKMKNLEGERRTTLREFMLSANRAIGDNWKTLCTLPGPASDAATAVDANRGAVDQEVHSLAAVRMEEKKHETSKEHVLANTTHIVRADPAPADDSFIETLSAPLESPLVRKMMMIERREGKAIGSKYYAGLMVLSWDGFLHFFDIPSSSTVKRDASASAAFQEISPSISLDDLLANKKDLDEVLMFKSTHTLWFDESSTVEAKSSHKSHKIEVKGRTNITSIKRHFGSGTTSKTVTFRTATEAEMNNIVEEITDCIYTRGGMQTAVTGRMSTDSRSSFGSSFSSTGSGSTKL 542
BLAST of mRNA_E-siliculosus-1a_M_contig7.15169.1 vs. uniprot
Match: D8LNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW9_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 2.580e-17 Identity = 78/297 (26.26%), Postives = 130/297 (43.77%), Query Frame = 1
Query: 82 VKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFLHLKETLGDQVGGK----------TLHE----DVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANRAVGDNWKKLCTLSGPASDAATAVDASRGAVDQEVHS---LAAVRMEEKKHDS-------------------------PKEHILANTTHIVRADPAPADDSFIETLSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKK---DASASAAFQEISP 837
+ M K++ RF E+ +GTACL + + + +A+ +E + +G + TL + DVW +Y+ AV Q W V+AKLG++F +MKD+E ERR ++ + + + W+ L L P ++ R +DQEV + A R+ + ++ + R++ PAD F+ L +PL S L+ M+ERRE I S++ L +L+ D +L FD+P + K +A S AF E+ P
Sbjct: 245 LNAMVKKLDDRFAEMVGQGTACLRLMHSAEMNSAKAYGRYQEVVTASLGREASPARATAPLTLRDVAGSDVWLADMNYRVAVTQQARVWKGVSAKLGDLFGRMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKEPVVHTLDRINVDRHLLDQEVRQQMRVGAARLLAGRQENGAGXXXXXXXXXXXXXXPAGXXXXXXXXXXXXGGGSVERSETMPAD--FLAGLESPLASSLIARSTMLERREKAMIASRWILVLAILTHDSYLLLFDVPRGTAAHKKQLNARTSEAFAELVP 539
BLAST of mRNA_E-siliculosus-1a_M_contig7.15169.1 vs. uniprot
Match: A0A836CKX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX7_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.080e-9 Identity = 56/183 (30.60%), Postives = 87/183 (47.54%), Query Frame = 1
Query: 1 MAEVDCRAARNRDALCDELEHEDMLGKV-KVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAFL---HLKETLGDQVGGKTLHE---------DVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANRAVGDNWKKLCTLSGPASDAATAVDASRGAVDQEV 510
M +++ ++A CDE+E D+LGK+ + M ++ RF + G ACL L++ + +A L+E V E DVW +Y+ AV Q A +A +A+LG +F MKDLE RRT +R +LS +A W++L L P ++ R +D EV
Sbjct: 160 MFDMEEKSAMMMLTFCDEMES-DVLGKMLQAMATDLGERFTRMVATGDACLKVLSDNEASTVKATTLVGSLREPAPGSVAAAAAQEEGAAAAPRSDVWITDMAYRVAVTQQLAACDAASAQLGALFGHMKDLEVNRRTAIRNALLSLLQAQDLVWRQLPILKDPVLQVLERINTDRRFLDGEV 341
BLAST of mRNA_E-siliculosus-1a_M_contig7.15169.1 vs. uniprot
Match: A0A6H5KEN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN9_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 1.580e-9 Identity = 48/175 (27.43%), Postives = 77/175 (44.00%), Query Frame = 1
Query: 43 LCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACL-------------------LSLANIDKRVGQAFLHLKETLGDQVGGKTLHEDVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANRAVGDNWKKLCTLSGPASDAATAVDASRGAVDQEV 510
+C E + ++ M K++ RF E+ +GTACL + A++++ A TL D G D+W +Y+ AV Q W V+AKLG++F KMKD+E ERR ++ + + + W+ L L P ++ R +DQEV
Sbjct: 274 MCQEAHVTVIDNQLNAMVKKLDERFAEMVGQGTACLRLMHSAEMNSVKAYGRYQEIVTASLEREASPARATAPLTLRDVAGS-----DIWLADMNYRVAVTQQARVWKGVSAKLGDLFGKMKDIEVERRKAIQGGLTAMVQLQDALWRDLPALKDPVLHTLDRINVDRHLLDQEV 443
BLAST of mRNA_E-siliculosus-1a_M_contig7.15169.1 vs. uniprot
Match: A0A7S3Q068_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q068_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.530e-5 Identity = 69/272 (25.37%), Postives = 113/272 (41.54%), Query Frame = 1
Query: 73 LGKVKVMGKEMQRRFKELSEEGTACLLSLANIDKRVGQAF--------LHLKETLGDQVGGKTLHE----DVWFLFCSYQTAVVHQKEAWNAVTAKLGEVFAKMKDLEGERRTTLREFMLSANRAVGDNWKKLCTLSGPASDAATAVDASRGAVDQEVHSLAAVRMEEKKHDSPKEHILANTTHIVRADPAPADDSFIET---LSAPLESPLVRSMMMIERREGKAIGSKYHAGLMVLSWDGFLHFFDIPSSSTVKKDASASAAFQEISPSI 843
L K+ + KE++ +S G A + L ++ V +A+ L L + K + DVW + Y+ AV + W +A+L +FA +K++E RR LRE M+ W+ L L+ + T ++ + + VR + + E AN T P A I L +PL S L+ +I R+ K I S + L + DG+LH F++PS+S + A AFQ + P +
Sbjct: 282 LTKLCELKKELEAELSVMSVLGDATIYELEKAEEDVQKAWAAFYSLACLADSNALTQKANIKGIDPNAVTDVWLVEMHYRMAVAYLTTVWEKSSAELSTLFAGVKEMECNRRFRLRELMVLFMERGERLWESLPPLAKSVLEILTKAPTDTKKIEANITEI--VREKARVLQRTDE---ANVTTDPLNGPGLAGVPEIRDDFELQSPLMSNLLIKTEVIWRKSDK-IMSIWKPCLAATTSDGYLHLFELPSTSNIVTKTPAEVAFQALVPPV 547 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig7.15169.1 >prot_E-siliculosus-1a_M_contig7.15169.1 ID=prot_E-siliculosus-1a_M_contig7.15169.1|Name=mRNA_E-siliculosus-1a_M_contig7.15169.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=425bp MAEVDCRAARNRDALCDELEHEDMLGKVKVMGKEMQRRFKELSEEGTACLback to top mRNA from alignment at E-siliculosus-1a_M_contig7:1875656..1883199- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig7.15169.1 ID=mRNA_E-siliculosus-1a_M_contig7.15169.1|Name=mRNA_E-siliculosus-1a_M_contig7.15169.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7544bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:1875656..1883199- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig7:1875656..1883199- >mRNA_E-siliculosus-1a_M_contig7.15169.1 ID=mRNA_E-siliculosus-1a_M_contig7.15169.1|Name=mRNA_E-siliculosus-1a_M_contig7.15169.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2550bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:1875656..1883199- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |