|
|
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 1.270e-14 Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = 2
Query: 638 NLACDGQHSGLEETVDLLLR*GADETAVCNHGRTPNDLIEPTFDDY----CDQGENDSALLLLARSPADRAWRRRSWLVMLRS 874
++AC QH GLE VDLLLR GADETA+ N G+TP L++ ++ C + E + +LLAR+PADRAWRRR WLVMLRS
Sbjct: 344 HVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEINRVRMLLARAPADRAWRRRCWLVMLRS 426
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 4.210e-14 Identity = 56/130 (43.08%), Postives = 69/130 (53.08%), Query Frame = 2
Query: 644 ACDGQHSGLEETVDLLLR*GADETAVCNHGRTPNDLIEPTFDD--YCDQGENDSALLLLARSPADRAWRRRSWLVMLRSRTSIAGRASCEHAIQAA*TPLEGAGETGKSTSHMRKRMDMASLRRRAVAGN 1027
AC Q GL ++DLLLR GADETA GRTP D++ T D +C E D A LLL R+P DR WRRR WLV+LRSRT + + GA ++G S R+ A + VAGN
Sbjct: 349 ACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSRTIVVAHRCAK-----------GASDSGLSLCQARRNGKGARI---DVAGN 464
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: A0A6H5JWW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW4_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 2.090e-13 Identity = 51/98 (52.04%), Postives = 62/98 (63.27%), Query Frame = 2
Query: 593 DGMSALHYAAATDEANLACDGQHSGLEETVDLLLR*GADETAVCNHGRTPNDLIEPTFDDY----CDQGENDSALLLLARSPADRAWRRRSWLVMLRS 874
DG + LH LAC Q SGLE VDLLLR GADETA+ N G+TP DL++ ++ C + E + LLLAR+PAD+A RRR WLVMLRS
Sbjct: 552 DGNTPLH---------LACYRQDSGLEAPVDLLLRWGADETALNNDGKTPADLLDEHDNENDRTTCSEAEIERVRLLLARAPADQARRRRCWLVMLRS 640
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 2.430e-13 Identity = 48/92 (52.17%), Postives = 61/92 (66.30%), Query Frame = 2
Query: 644 ACDGQHSGLEETVDLLLR*GADETAVCNHGRTPNDLIEPTFDDY----CDQGENDSALLLLARSPADRAWRRRSWLVMLRSRTSIAGRASCE 907
AC Q G+E TVDLLLR GADETA+ N +TP DL++ ++ C + E + LL+AR+PA+RAWRRR WLVMLRS A RA+ E
Sbjct: 264 ACYWQVRGVEATVDLLLRWGADETALDNDSKTPADLLDEDDNENDRTTCSEAEIEQVRLLMARAPANRAWRRRCWLVMLRSYAKTA-RATTE 354
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 4.760e-13 Identity = 45/91 (49.45%), Postives = 53/91 (58.24%), Query Frame = 2
Query: 647 CDGQHSGLEETVDLLLR*GADETAVCNHGRTPNDLIEPTFDDY-----CDQGENDSALLLLARSPADRAWRRRSWLVMLRSRTSIAGRASC 904
C +H GLE VD+LLR GADET + G +P D + + Q E D LLL+R+PADRAWRRR WLVMLRSR S A C
Sbjct: 26 CWERHEGLEAAVDMLLRWGADETTLNYGGASPADFLGGRYGKVIGHNPAPQDEIDRTRLLLSRAPADRAWRRRGWLVMLRSRDSKAQEGKC 116
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: D7G6I6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6I6_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 6.040e-13 Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = 3
Query: 1176 KMEISLRLDDLTAFVALSNVEALFRGNEEGTSSESTGAALGATPRRA-KGLCNYASGHFGDGMMAKCR*ELDVFKAARVSTSAN---NLVGTSSPGV*ASFPFISSDD 1487
K+ +LRLDDL A+V+L NVEAL RGN EGT E+T A+L + K + +Y+S FGDGM K R ELD+FKAAR+ + + P V + FPFISS D
Sbjct: 470 KVVTTLRLDDLNAYVSLPNVEALLRGNHEGTPDEATLASLRSHVTGCLKDIRSYSSSQFGDGMEVKFRRELDLFKAARIINHVHVRQQPLDDIDPEVLSIFPFISSGD 577
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: A0A6H5J7H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7H5_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 8.700e-13 Identity = 63/146 (43.15%), Postives = 76/146 (52.05%), Query Frame = 2
Query: 644 ACDGQHSGLEETVDLLLR*GADETAVCNHGRTPNDLIEPTFDD---YCDQGENDSALLLLARSPADRAWRRRSWLVMLRSRTSIAGRASCEHAIQAA*TPLEGAGETGKSTSHMRKRMDMASLRRR--AVAGNWLKS-MTRAGA*G 1063
AC QH GLE TV LLLR GADETAV + TP DL+ DD + E + LLLAR+P +RAW R WLVMLRS + GRAS + + GA E RK +RR AG+W++S M AG G
Sbjct: 116 ACYWQHKGLEATVGLLLRSGADETAVNSADETPADLLGYLDDDDGKRYSEAEIERVRLLLARAPTNRAWLGRCWLVMLRS-CAKTGRASTDETV--------GADEDSNDAGD-RKSGKFKGVRRENGESAGSWVRSRMNGAGEVG 251
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 2.030e-12 Identity = 48/86 (55.81%), Postives = 56/86 (65.12%), Query Frame = 2
Query: 626 TDEANLACDGQHSGLEETVDLLLR*GADETAVCNHGRTPND-LIEPTFDD--YCDQGENDSALLLLARSPADRAWRRRSWLVMLRS 874
T + AC Q G+E TVDLLL+ GADETAV N G TP D L+E ++ C E LLLAR+PA+RAWRRR WLVMLRS
Sbjct: 281 TTPLHRACYRQDIGVEATVDLLLQWGADETAVHNDGNTPADWLVENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLRS 366
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 8.180e-12 Identity = 44/82 (53.66%), Postives = 55/82 (67.07%), Query Frame = 2
Query: 638 NLACDGQHSGLEETVDLLLR*GADETAVCNHGRTPNDLIEPTFDDYCDQGENDS-ALLLLARSPADRAWRRRSWLVMLRSRT 880
+LA Q G+ E VDLLLR GA ETAV HG TP ++ + D E + AL+LLAR+PADRAWRRR W+VMLR+R+
Sbjct: 277 HLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARS 358
BLAST of mRNA_E-siliculosus-1a_M_contig7.15103.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.880e-10 Identity = 49/117 (41.88%), Postives = 62/117 (52.99%), Query Frame = 2
Query: 596 GMSALHYAAATDEANLACDGQHSGLEETVDLLLR*GADETAVCNHGRTPNDLIEPTFDDYC--DQGENDSAL---------------------LLLARSPADRAWRRRSWLVMLRSR 877
G+SALH L C G++ VDLLLR GA ETAV +G TP+D+++ T +Y D G + SA +LLAR+PADR WRRR WLVMLR+R
Sbjct: 342 GLSALH---------LTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRAR 449
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 606 |
| Model size | 1487 |
| Exons | 4 |
| Ec32 ortholog | Ec-15_003700.1 |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Hectar predicted targeting category | other localisation |
| BRITE | ko00000,ko04131 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | G |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| EggNOG free text desc. | response to abiotic stimulus |
| GOs | GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259 |
| KEGG ko | ko:K21440 |
| Seed eggNOG ortholog | 2880.D8LRS0 |
| Seed ortholog evalue | 1.3e-07 |
| Seed ortholog score | 63.5 |
| Taxonomic scope | Eukaryota |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622935925.0985622-UTR-E-siliculosus-1a_M_contig7:1239235..1239314 | 1622935925.0985622-UTR-E-siliculosus-1a_M_contig7:1239235..1239314 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig7 1239236..1239314 + |
| 1696250849.8744643-UTR-E-siliculosus-1a_M_contig7:1239235..1239314 | 1696250849.8744643-UTR-E-siliculosus-1a_M_contig7:1239235..1239314 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig7 1239236..1239314 + |
| 1622935925.1169171-UTR-E-siliculosus-1a_M_contig7:1240831..1240846 | 1622935925.1169171-UTR-E-siliculosus-1a_M_contig7:1240831..1240846 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig7 1240832..1240846 + |
| 1696250849.891861-UTR-E-siliculosus-1a_M_contig7:1240831..1240846 | 1696250849.891861-UTR-E-siliculosus-1a_M_contig7:1240831..1240846 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig7 1240832..1240846 + |
| 1622935925.1726198-UTR-E-siliculosus-1a_M_contig7:1241616..1242075 | 1622935925.1726198-UTR-E-siliculosus-1a_M_contig7:1241616..1242075 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig7 1241617..1242075 + |
| 1696250849.933973-UTR-E-siliculosus-1a_M_contig7:1241616..1242075 | 1696250849.933973-UTR-E-siliculosus-1a_M_contig7:1241616..1242075 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig7 1241617..1242075 + |
| 1622935925.198738-UTR-E-siliculosus-1a_M_contig7:1242748..1243076 | 1622935925.198738-UTR-E-siliculosus-1a_M_contig7:1242748..1243076 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig7 1242749..1243076 + |
| 1696250849.9445615-UTR-E-siliculosus-1a_M_contig7:1242748..1243076 | 1696250849.9445615-UTR-E-siliculosus-1a_M_contig7:1242748..1243076 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig7 1242749..1243076 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622935925.1319897-CDS-E-siliculosus-1a_M_contig7:1240846..1241386 | 1622935925.1319897-CDS-E-siliculosus-1a_M_contig7:1240846..1241386 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig7 1240847..1241386 + |
| 1696250849.9066827-CDS-E-siliculosus-1a_M_contig7:1240846..1241386 | 1696250849.9066827-CDS-E-siliculosus-1a_M_contig7:1240846..1241386 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig7 1240847..1241386 + |
| 1622935925.1492715-CDS-E-siliculosus-1a_M_contig7:1241550..1241616 | 1622935925.1492715-CDS-E-siliculosus-1a_M_contig7:1241550..1241616 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig7 1241551..1241616 + |
| 1696250849.9195442-CDS-E-siliculosus-1a_M_contig7:1241550..1241616 | 1696250849.9195442-CDS-E-siliculosus-1a_M_contig7:1241550..1241616 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig7 1241551..1241616 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig7.15103.1 >prot_E-siliculosus-1a_M_contig7.15103.1 ID=prot_E-siliculosus-1a_M_contig7.15103.1|Name=mRNA_E-siliculosus-1a_M_contig7.15103.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=202bp
MSAEHLKRKSLEGLAREIFTIVCRHATSKQWIQWLRVPLECAAATGNLDL
VRGLLMGGASVSTMGDKGCTPLHFAARSGREEVVSTLLASGAEEDGPNAD
GNASLLLAAERGHLTVVDALLAANADPNIRNSEGYSASEKAAMGCYVDTL
KEILAHGADVNAAAGGDGMSALHYAAATDEANLACDGQHSGLEETVDLLL
R* back to topmRNA from alignment at E-siliculosus-1a_M_contig7:1239236..1243076+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig7.15103.1 ID=mRNA_E-siliculosus-1a_M_contig7.15103.1|Name=mRNA_E-siliculosus-1a_M_contig7.15103.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3841bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:1239236..1243076+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CACTCACTCCCTGCTCCCCTCATCTTCCCTCGTCACGCGCGAAGGCATCT
CGGCAGTAGAACACACTGCCAAAGCACAGGTCAGCGTAACATGCAGAGGT
CCTGGTCTATAATCTCTCTCTGCTGCTGAATGTAGCGTACCCCTTTAGGA
CACGCTTTCTCCGAAGCTCTCGCATTCACTGCCGTGCTGTGCAGGGCATC
TTGTAAGAGGGGTAGTATTAACGGAAGCCAATTTCTTCGTTTTAAAACCC
CGGGGCGCACACAGAAAAGTGAAAACGACATCTCACCCCTACAGAGGTCG
AAATATAATTAAAATCAGTGGTGTCGTATACTAATGGCGAGCAAAGTTAA
AAAAATGAACATTTTTTTACTTGATTTTAGTATACCCCGCCCCCCCCTCA
GCGGCTCTGGAGGGGGGTTAAGACTACTGTAGGTGTCGAGGAAACTTTTT
CTTGTGCGCCCTTGCCCCGAACGGTGAAAAGAAAACCGACCTTTTTGTCG
CTTGTTCTATTCGTGATGTCATCGCAAAAAAAAGTACGTTTCCTTCGCTG
AATATACGCTTTCCTCGGCAAACAACAGGTTGACTTGGTTTTGCTCACCA
TAGAGCAGCGGTAAAAGCGCAATGAGCAGCACCCGGCACAAAGGACAGCA
CACTTAGGAGGATCCCGTCCACCCGGCCTGCTGTTTTCACTTTTCAGCAA
CAACAGGCGCAGGGCAGAGTGTCGCAACCTGGGTGTTGCTTGCGATTGCT
TCAGTTTGCCGGCTCATTTTTCACGGTTGCGACTCCCCTCTTTGACCACC
ACCTGCCCGTAGACGAACTCAACAACAATCATAGGGCGGCAGCGACGCTG
ACGGCCAGCATCATATAGATCACCAATCCGAAAGGATCAGCGTGTCGGAG
GCCCTGTTGCTCTACTGCTGCGTGGTGCCGTGGATTGATGTTGATGTGTC
CGACCAAAAACAGATCATCTCGCCGATTTTTTCCGACGGCATTTTGGTGA
GGTGGCACGCGTCTCTCACACACGTTCTTGAGCTGCACCCAAGCCCCCAA
TACCCGCGAAGCAGCACGGTGCCGGGAGTGAGTATCATATAGACAGCCGA
ACCGAAGGAATCAGCGCGTTGGAGGTCTTGGCGCTGCTGCCGTACTCGTT
CTACTGTTTCCGTGTTTGCTATGTGTGATTGAAAAACATTCTCCAGCACC
AACAGCAGCAGCAGTTACAGACGAGAGCACCACACAATGTCTCGTTTTGG
GCCAAGAACGGACTGAACGCGGCTTCTGCTGCTTGTCCATCTCCACAATA
GACCTGGACGTCAGTCTGGCAGGTCTTGCTAGCGCTCTCAGTGATGTTGC
AGCGCCCGCGGTGCGCCTGCCCGACCCTTGTGTCAATTCCCGGATCCGTG
AAAGCAGCAGTAGTAGGCCCGAAAAATCCCGGCTCCTTCTTTTCACGAAT
CCCGAGAGAAACGCCTCCATATGTTTGCAAGAAAACACGATTCCGTGATA
TTTTCCGTTCTTTTTTGGTCGTTAATAATACCCATAAATCTGCGTGCCTG
CCTCAGGTGTAAATTGCCAATCTTCCATTCACTCAAATTTGCGCAGGGAT
TTTACTGCAGCATGAGCGCGGAACACCTCAAGCGAAAGTCTCTGGAAGGC
CTTGCACGCGAGATCTTCACAATAGTCTGCCGGCATGCCACGTCGAAGCA
GTGGATCCAATGGCTCCGGGTCCCGCTGGAGTGCGCTGCAGCCACCGGCA
ATCTAGATCTTGTTCGCGGCCTGCTGATGGGCGGGGCGAGTGTAAGCACG
ATGGGTGACAAGGGGTGCACTCCGCTGCACTTCGCTGCGAGGTCTGGACG
GGAGGAGGTGGTGAGTACCCTCTTGGCCAGCGGGGCAGAAGAGGACGGTC
CTAACGCCGATGGGAATGCGTCCCTTTTACTTGCGGCAGAGAGAGGCCAC
CTGACCGTCGTGGATGCTCTTTTGGCGGCCAATGCCGACCCAAACATTCG
CAACTCTGAAGGATACTCGGCGTCGGAGAAGGCCGCTATGGGATGTTACG
TTGACACGCTGAAAGAAATCCTCGCACATGGGGCGGACGTGAACGCTGCT
GCCGGAGGAGATGGCATGTCAGCGCTGCACTACGCAGCTGCAACTGATGA
AGTGAGTGCTGTCGATGCACTCGTCGAAGCAGGGAGTGACATCGAAAAGG
TAACCACCATCGAGGGGTACACGCCTCTGTGCTGTGCCGCGTTGGAGAGA
AAAAACAACGCCATGATTGCCCTATTGGATCACGGAGCTAACGCTGCGGT
GCGCGATACCGACAGGCAAACTTGGCTTGTGATGGACAGCATAGTGGCCT
GGAGGAGACCGTCGACCTTCTACTGCGATGAGGGGCGGACGAAACAGCCG
TGTGCAACCATGGTCGGACTCCAAATGACCTCATTGAGCCGACGTTTGAC
GATTACTGTGATCAAGGCGAGAACGATAGCGCCCTGCTTCTGCTGGCGCG
GTCTCCGGCAGACAGGGCTTGGCGTCGCCGGTCCTGGCTCGTGATGCTTC
GATCGCGCACTTCAATCGCGGGGAGAGCCAGCTGTGAGCACGCGATACAG
GCGGCGTAAACACCACTGGAGGGCGCCGGCGAGACGGGAAAATCCACAAG
TCACATGCGAAAGAGGATGGATATGGCGAGCCTCAGGCGGCGAGCGGTGG
CTGGGAATTGGCTGAAATCGATGACGAGAGCCGGGGCTTGAGGGAGCTTG
TGACGTTGCTGGTAGGGCTTGACCAGGAAGACGTGTTTCAGACGGTCCTG
GGCTTTCTATGAGGACGGATGTCAAAGTTGGAGTGGTTTGGTAAGTTGGA
TCCTGTTGTTGTGTTCTTCCAGATGGCTTGGAGGAATTTGAATCGCGAGC
CTTGTCTTGGAATTTTATACTCGCTGATAGAGCGAACGTTGAAGTGCCTT
CTGGACCTCCAACCTTCCACACGTGATCCTCTTGTGATTGCTGCGTGTAC
GGTGCTCACCCATCCCTGCCCCCGCCCATACCGTCGAAATCTCGGGTGGG
TGAACATTGATGTCATCAGGAGGCACGAAGCATCGTTTGAAATATTAGTA
TATACCAACATCTTGCTCGACTGCATCGAGATCCTTTGACTTGGCCTGTT
CTCTAATTGCCCTATCAGAGGTCCGCCAGCTACGATATGCCCGTGAAAAA
CCGCTATGTATGTTTTTTGGGCATGTCGTCATGCATCCTTTGTGTGTACG
GTCATGTTTTAAGGCGTAATTGCGCTTGGTGCCGTTGATCGTCACCTTAT
TTGTCCCTTGGACGTTTCCGAGGGCAGTTTTTCAACATGAGCAAACAGAA
ACCTCGAAATCGACGTGAGATTGTTCTACATGAGCGCAGGCAACGGTGCG
TGCATCGTCGCTATGCGGGCCGCGCCCGATTCATTGGTTCATTACGACGC
TTCATTGCTGGTTGCACAGCATCTCACAGCCAACGCTTGCGACCCCTTGT
CGAAATTTGTCAGAATGAGATAGGCGTGCAAGATGGAAATATCCCTTCGG
CTGGACGACCTGACCGCCTTCGTGGCTCTCTCCAACGTCGAAGCGCTGTT
CCGAGGAAACGAAGAGGGCACATCGAGTGAGAGCACAGGCGCCGCTTTGG
GCGCCACGCCACGGAGGGCCAAGGGCCTCTGCAATTACGCAAGCGGCCAC
TTTGGCGACGGCATGATGGCCAAGTGCCGATGAGAGCTTGACGTCTTCAA
GGCCGCGCGGGTCAGCACGTCCGCCAACAACCTGGTGGGGACATCGTCCC
CGGGGGTTTGAGCGTCTTTCCCTTTCATCAGCTCGGACGAC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig7:1239236..1243076+ >mRNA_E-siliculosus-1a_M_contig7.15103.1 ID=mRNA_E-siliculosus-1a_M_contig7.15103.1|Name=mRNA_E-siliculosus-1a_M_contig7.15103.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1212bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:1239236..1243076+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAGCGCGGAACACCTCAAGCGAAAGTCTCTGGAAGGCCTTGCACGCGA
GATCTTCACAATAGTCTGCCGGCATGCCACGTCGAAGCAGTGGATCCAAT
GGCTCCGGGTCCCGCTGGAGTGCGCTGCAGCCACCGGCAATCTAGATCTT
GTTCGCGGCCTGCTGATGGGCGGGGCGAGTGTAAGCACGATGGGTGACAA
GGGGTGCACTCCGCTGCACTTCGCTGCGAGGTCTGGACGGGAGGAGGTGG
TGAGTACCCTCTTGGCCAGCGGGGCAGAAGAGGACGGTCCTAACGCCGAT
GGGAATGCGTCCCTTTTACTTGCGGCAGAGAGAGGCCACCTGACCGTCGT
GGATGCTCTTTTGGCGGCCAATGCCGACCCAAACATTCGCAACTCTGAAG
GATACTCGGCGTCGGAGAAGGCCGCTATGGGATGTTACGTTGACACGCTG
AAAGAAATCCTCGCACATGGGGCGGACGTGAACGCTGCTGCCGGAGGAGA
TGGCATGTCAGCGCTGCACTACGCAGCTGCAACTGATGAAATGAGCGCGG
AACACCTCAAGCGAAAGTCTCTGGAAGGCCTTGCACGCGAGATCTTCACA
ATAGTCTGCCGGCATGCCACGTCGAAGCAGTGGATCCAATGGCTCCGGGT
CCCGCTGGAGTGCGCTGCAGCCACCGGCAATCTAGATCTTGTTCGCGGCC
TGCTGATGGGCGGGGCGAGTGTAAGCACGATGGGTGACAAGGGGTGCACT
CCGCTGCACTTCGCTGCGAGGTCTGGACGGGAGGAGGTGGTGAGTACCCT
CTTGGCCAGCGGGGCAGAAGAGGACGGTCCTAACGCCGATGGGAATGCGT
CCCTTTTACTTGCGGCAGAGAGAGGCCACCTGACCGTCGTGGATGCTCTT
TTGGCGGCCAATGCCGACCCAAACATTCGCAACTCTGAAGGATACTCGGC
GTCGGAGAAGGCCGCTATGGGATGTTACGTTGACACGCTGAAAGAAATCC
TCGCACATGGGGCGGACGTGAACGCTGCTGCCGGAGGAGATGGCATGTCA
GCGCTGCACTACGCAGCTGCAACTGATGAAGCAAACTTGGCTTGTGATGG
ACAGCATAGTGGCCTGGAGGAGACCGTCGACCTTCTACTGCGATGAGCAA
ACTTGGCTTGTGATGGACAGCATAGTGGCCTGGAGGAGACCGTCGACCTT
CTACTGCGATGA back to top
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