mRNA_E-siliculosus-1a_M_contig7.15047.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: A0A6H5JM75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM75_9PHAE) HSP 1 Score: 233 bits (594), Expect = 1.380e-72 Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 1
Query: 103 MSNPLTQPDIVFRLMEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTTDTGVPQLSQSFECGLAPRSTVCRDIAALGRLDLLVSAREEHECPWDEDTCSYASENGHADVLRWAFANG 456
M NPL QPDIVFRLMEFVGGEQY+FFAGVSRTWRDAWEGRPTTTRA T DTGVPQLSQSF+CGLAPRSTVCRDIAALGRLDLLVSARE+HECPWDE+TCS ASENGHADVLRWAFANG
Sbjct: 1 MPNPLMQPDIVFRLMEFVGGEQYIFFAGVSRTWRDAWEGRPTTTRAFTADTGVPQLSQSFKCGLAPRSTVCRDIAALGRLDLLVSAREQHECPWDEETCSCASENGHADVLRWAFANG 118
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: D7G8W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI) HSP 1 Score: 213 bits (541), Expect = 3.430e-64 Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 1
Query: 145 MEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTTDTGVPQLSQSFECGLAPRSTVCRDIAALGRLDLLVSAREEHECPWDEDTCSYASENGHADVLRWAFANG 456
MEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVT DTGVPQLSQSFECGLA RSTVC+DIAALGRLDLLVSAREE+ECPWDEDTCSYASENGHADVLRWAFANG
Sbjct: 1 MEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTADTGVPQLSQSFECGLARRSTVCQDIAALGRLDLLVSAREEYECPWDEDTCSYASENGHADVLRWAFANG 104
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE) HSP 1 Score: 109 bits (272), Expect = 7.610e-25 Identity = 55/91 (60.44%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 127 DIVFRLMEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTTDTGVPQLSQSFECGLAPRSTVCRDIAALGRLDLLVSAREEHECPWDEDTC 399
DIV + EFV QYLFFA VSR WRD W RPT T+A+T DT VPQLS SFECGL + VC +A LGRLDLL AR C W+E+TC
Sbjct: 8 DIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMG-CQWNENTC 97
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE) HSP 1 Score: 107 bits (268), Expect = 8.900e-24 Identity = 53/86 (61.63%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 142 LMEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTTDTGVPQLSQSFECGLAPRSTVCRDIAALGRLDLLVSAREEHECPWDEDTC 399
L EFV Q+LFFA VSR WRD W RPT T+A+T DT VPQLS SFECGL + VC +A LGRLDLL AR CPW+E+TC
Sbjct: 31 LAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLQRARAMG-CPWNENTC 115
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI) HSP 1 Score: 108 bits (270), Expect = 1.630e-23 Identity = 55/91 (60.44%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 127 DIVFRLMEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTTDTGVPQLSQSFECGLAPRSTVCRDIAALGRLDLLVSAREEHECPWDEDTC 399
DIV + EFV QYLFFA VSR WRD W RPT T+A+T DT V QLS SFECGL + VC +A LGRLDLL AR CPW+E+TC
Sbjct: 10 DIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMG-CPWNENTC 99
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: D7G8V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V2_ECTSI) HSP 1 Score: 109 bits (273), Expect = 2.190e-23 Identity = 55/93 (59.14%), Postives = 66/93 (70.97%), Query Frame = 1
Query: 121 QPDIVFRLMEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTTDTGVPQLSQSFECGLAPRSTVCRDIAALGRLDLLVSAREEHECPWDEDTC 399
Q D+ L+EFV EQ+LFFAGV R W++AW RP TTRAVT DT V QLSQ+F+CGL+ + VC +A LGRLDLL AR H C W+E TC
Sbjct: 8 QSDVASCLVEFVDYEQFLFFAGVCRAWKEAWGQRPPTTRAVTEDTTVAQLSQNFQCGLSLIADVCTSVAKLGRLDLLQCARR-HGCAWNEVTC 99
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 2.060e-20 Identity = 54/101 (53.47%), Postives = 65/101 (64.36%), Query Frame = 1
Query: 103 MSNPL-TQPDIVFRLMEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTTDTGVPQLSQSFECGLAPRST-VCRDIAALGRLDLLVSAREEHECPWDEDTC 399
M NP D++ EFV +Q+LFFA VSR WR AW GRPT+TRA+T DT QL S +CGL+P T VC IA+LGRLDLL +AR WD+ TC
Sbjct: 1 MGNPFQATADVISHASEFVHDDQFLFFASVSRAWRGAWRGRPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALG-FRWDKMTC 100
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 2.120e-12 Identity = 46/96 (47.92%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 127 DIVFRLMEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTTDTGVPQLSQSFECGLA-PRSTVCRDIAALGRLDLLVSAREEHECPWDEDTCSYAS 411
D++ ++ FV +Q+LFFA VSR WR+AW RP T VT D+ V QL SFE GL R +C IA LG L+LL SAR C W+ T S A+
Sbjct: 62 DLLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSG-CAWNGLTFSEAA 156
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 2.180e-12 Identity = 50/102 (49.02%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 115 LTQPDIVFRLMEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTTDTGVPQLSQSFECGLAPRSTV--CRDIAALGRLDLLVSAREEHECPWDEDTCSYASE 414
+T DIV L +FV +Q+LFFA VSR+WRDAW R T T VT T QL SF CGLA R V C A G LDLL A E+ CPW + A+E
Sbjct: 20 MTNMDIVHGLAQFVLDKQFLFFAAVSRSWRDAWGERATVTSWVTPHTTPFQLQYSFACGLA-RDGVDWCLTTARAGNLDLLRWATEQG-CPWTRSLSAAAAE 119
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Match: A0A6H5KXW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXW1_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 8.660e-7 Identity = 42/116 (36.21%), Postives = 54/116 (46.55%), Query Frame = 1
Query: 109 NPLTQPDIVFRLMEFVGGEQYLFFAGVSRTWRDAWE-GRPTTTRAVTTDTGVPQLSQSFECGLAPRSTVCRDIAALGRLDLLVSAREEHECPWDEDTCSYASENGHADV---LRWA 444
NPL P I+ L+ F +LF AGVSR+WRDAW RP T +L + GL +VC A+ G L L AR CPWD C+ A+ V ++WA
Sbjct: 726 NPLADPTILRHLISFAARNGFLFVAGVSRSWRDAWGVERPPETEVDAAVQSPSRLGWARASGLGWGPSVCARAASGGHLATLRYARALG-CPWDWTCCALATTKALVPVSTMIQWA 840 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig7.15047.1 >prot_E-siliculosus-1a_M_contig7.15047.1 ID=prot_E-siliculosus-1a_M_contig7.15047.1|Name=mRNA_E-siliculosus-1a_M_contig7.15047.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=319bp ERGGVRKGGSGRKGQRSACTLSGGRSHRCEGLAGMSNPLTQPDIVFRLMEback to top mRNA from alignment at E-siliculosus-1a_M_contig7:531396..533455- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig7.15047.1 ID=mRNA_E-siliculosus-1a_M_contig7.15047.1|Name=mRNA_E-siliculosus-1a_M_contig7.15047.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2060bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:531396..533455- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig7:531396..533455- >mRNA_E-siliculosus-1a_M_contig7.15047.1 ID=mRNA_E-siliculosus-1a_M_contig7.15047.1|Name=mRNA_E-siliculosus-1a_M_contig7.15047.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1914bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:531396..533455- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |