mRNA_E-siliculosus-1a_M_contig7.15002.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: D8LK09_ECTSI (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK09_ECTSI) HSP 1 Score: 165 bits (417), Expect = 1.630e-45 Identity = 83/168 (49.40%), Postives = 108/168 (64.29%), Query Frame = 2
Query: 806 KKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQSTSNKRMFSYLSHYSFRQRLKYKAGLLNKVVVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMVRCASEHHSAETSVLGKRK 1309
K I K ++D+ KKK L +A YR ARAK L D H+KTIK L+D YDVI++GKI VQ LMS Q+ +NK F +LSH+ FRQRL K + VV QDESYT+Q C +CG LKKD+G A+ Y C C L + RD++ NI++RCASE H T G+++
Sbjct: 7 KSYGILKAIKDSKDDKKKNNLGRACYRVNARAKDLVTDFHFKTIKFLMDNYDVIILGKINVQQLMSMKSQNKTNKDHFRFLSHFLFRQRLLMKTSITPHAVVIQDESYTTQTCVKCGVLKKDVGDAEVYKCSRCNLCMGRDISGASNILLRCASETHQEATRTSGRKR 174
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: A0A2G4EXR4_9CYAN (Transposase n=2 Tax=Tychonema bourrellyi TaxID=54313 RepID=A0A2G4EXR4_9CYAN) HSP 1 Score: 114 bits (285), Expect = 1.420e-24 Identity = 106/378 (28.04%), Postives = 183/378 (48.41%), Query Frame = 2
Query: 158 EQEKVLRKWMNSARQTYNEALRLVKAKKAKAN-LLLKSATRDLVKN------FKSARAAYTARLRKVKFGKARIKKRRKSGQFKGRRRYKKRKPFELKFKSRRLTSDSIELEKKSISFEDNTVCFFGSTKKHKLRVDMSEAFSDEPGAHKPSQSCRLAYCFGRWYIIVPEKVQIKKERADASVEPRIIGIDPGLRTAFTCSS--NFGDVLEVGIDTRYRFQREHGKKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLLNKVVVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMVR 1258
EQ+ ++++W +R YN ++ ++ + AKAN + +K+ + + F+ A VK K KK GQ + + KF+SR+ T SI + K ++ N + K +L + FSD RL +G +Y+IV E+VQ K + R++ +DPG+RT T S ++G +G D+ Q+ + + K+ A ++K + +KA R + + K+L+ +LH K K L+D +DVI++ ++SK+ + NK R LSHY F+ LK+KA +++V++ +E+YTS+ G + K+LG A+T GL +DRD+N I +R
Sbjct: 8 EQKALIKQWFGVSRFVYNTTIKYLQERGAKANWMTIKTGILNSLPEWAKPVPFQIKSIAIKDACSAVKAAKQGFKK---DGQLR-----------QCKFRSRKDTKQSIYVPKSAVK---NCGVYHSILGKCQLTESLPTNFSDG----------RLTLTYGEYYLIVSEEVQPTK----TDKQGRVVALDPGVRTFMTFFSEDSYG---WLGNDSNLYIQKLCFRLDKLVSKISKAPS-RQKRRFKKAASRLRCKIKNLSRELHHKVAKFLVDNFDVILLPTFETSQMVSKSRRKLRNKTVRQMLTLSHYEFKNFLKWKAWENSQLVIDCNEAYTSKTVSWTGEIVKNLGGARTIKSAATGLKMDRDLNGARGIFLR 350
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: A0A7Z9BN03_9CYAN (Transposase n=7 Tax=Microcoleaceae TaxID=1892252 RepID=A0A7Z9BN03_9CYAN) HSP 1 Score: 110 bits (274), Expect = 2.400e-23 Identity = 85/283 (30.04%), Postives = 143/283 (50.53%), Query Frame = 2
Query: 422 ELKFKSRRLTSDSIELEKKSISFEDNTVCFFGSTKKHKLRVDMSEAFSDEPGAHKPSQSCRLAYCFGRWYIIVPEKVQIKKERADASVEPRIIGIDPGLRT--AFTCSSNFGDVLEVGIDTRYRFQREHGKKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLLNKVVVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMVR 1258
+ KF+SR+ SI + K +I G K +L D FSD RL +G +Y+ + KVQ + ++ + R++ +DPG+RT F ++FG +G D+ + Q+ + + ++ A C K+K L+KA R + + ++ +LH KT + L++ +DVI++ ++SK+ + NK R LSHY F+Q LK+KA +KVV++ +E+YTS+ G + +LG AKT L +DRD+N I +R
Sbjct: 49 QCKFRSRKDVKQSIYIPKSAIKDCGIYHSILGGCKFKELLPDN---FSDG----------RLTLIYGEYYLTISTKVQ----QLNSENQGRVVALDPGVRTFMTFFSETSFG---WLGQDSNLQIQKLCFQLDKLVSQLSKAKC-KQKRNLKKAASRLRCKIQNFVKELHHKTARFLVENFDVILLPTFETSQMVSKSRRKLRNKSVRQMLTLSHYEFKQFLKWKAWENHKVVIDCNEAYTSKTVSWTGEIINNLGGAKTIKSNSTQLKMDRDLNGARGIFLR 310
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: A0A0M1JJY8_9CYAN (Transposase (Fragment) n=5 Tax=Microcoleaceae TaxID=1892252 RepID=A0A0M1JJY8_9CYAN) HSP 1 Score: 108 bits (269), Expect = 8.350e-23 Identity = 80/281 (28.47%), Postives = 142/281 (50.53%), Query Frame = 2
Query: 422 ELKFKSRRLTSDSIELEKKSISFEDNTVCFFGSTKKHKLRVDMSEAFSDEPGAHKPSQSCRLAYCFGRWYIIVPEKVQIKKERADASVEPRIIGIDPGLRT--AFTCSSNFGDVLEVGIDTRYRFQREHGKKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQSTSNK-RMFSYLSHYSFRQRLKYKAGLLNKVVVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMV 1255
+ KF+SR+ SI + K +I + + K K + + E FSD RL +G +Y+ + ++Q + ++ + R++ + PG+RT F ++FG +G D+ Q+ K + ++ A C K+K L+KA R + K+L +LH+KT + L++ +DVI + ++SK+ + + R+ LSHY F+Q LK+KA +K+V++ +E+YTS+ G + +LG AKT L +DRD+N I +
Sbjct: 49 QCKFRSRKDVKQSIYIPKSAIK---DCGIYHSILGKGKFKESLPENFSDG----------RLTLTYGEYYLTISTELQ----QLNSENQGRVVALAPGVRTFMTFFSETSFG---WLGKDSNLHIQKLCFKLDKLVSRLSKAKC-KQKRNLKKAASRLGCKIKNLVKELHYKTARFLVENFDVIFLPTFETSQMVSKSRRKRNKSVRLMLTLSHYEFKQFLKWKAWENHKIVIDCNEAYTSKTVSWTGEIINNLGGAKTIKSNSTQLKMDRDLNGARGIFL 308
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: A0A4V0XV77_PLAAG (Transposase n=1 Tax=Planktothrix agardhii CCAP 1459/11A TaxID=282420 RepID=A0A4V0XV77_PLAAG) HSP 1 Score: 102 bits (254), Expect = 1.580e-21 Identity = 66/202 (32.67%), Postives = 112/202 (55.45%), Query Frame = 2
Query: 665 ERADASVEPRIIGIDPGLRT--AFTCSSNFGDVLEVGIDTRYRFQREHGKKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLLNKVVVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMVR 1258
++ ++ + R++ +DPG+RT F ++FG +G D+ Q+ K + ++ A C +KK L+KA R + + K+L +LH KT K L++ +DVI++ ++SK+ + NK R LSHY F+Q LK+K+ +KVV++ +E+YTS+ G + +LG AKT L +DRD+N I +R
Sbjct: 2 QQLNSENQGRVVALDPGVRTFMTFFSETSFG---WLGKDSNLHIQKLCFKLDKLVSQLSKAKCKQKKN-LKKAASRLRCKIKNLVKELHHKTAKFLVENFDVILLPTFETSQMVSKSRRKLRNKSVRQMLTLSHYEFKQFLKWKSWENHKVVIDCNEAYTSKTVSWTGEIINNLGGAKTIKSNSTQLKMDRDLNGARGIFLR 199
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: UPI0011DFF219 (RNA-guided endonuclease TnpB family protein n=1 Tax=Scytonema hofmannii TaxID=34078 RepID=UPI0011DFF219) HSP 1 Score: 103 bits (256), Expect = 1.660e-20 Identity = 71/225 (31.56%), Postives = 119/225 (52.89%), Query Frame = 2
Query: 599 CRLAYCFGRWYIIVP-EKVQIKKERADASVEPRIIGIDPGLRTAFT--CSSNFGDVLEVGIDTRYRFQREHGKKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLLNKVVVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMVR 1258
CRL +G +Y+ +P E Q++ E + R++ +DPG+RT FT S+FG +G + + Q+ K + + T + K +L+KA R + + K+L +L K+I+ L+D +D+I++ + K + +K R LSHY F+Q +K+KA NKVV++ +E+YTS+ G + K+LG AK G +DRD+N I +R
Sbjct: 160 CRLVLAYGDYYLTIPVESPQLETEN-----QGRVVALDPGIRTFFTFLSESSFG---WLGKNANVKIQKLCFKLDELCSGI-SKTRGQLKRRLKKAANRLRGKIKNLVDELQKKSIRFLVDNFDIILLPTFETSQMSKKARRRIRSKSVRQMLTLSHYKFKQFIKHKAFEHNKVVLDVNEAYTSKTVSWSGEIVKNLGGAKIIKSSSTGQTMDRDLNGARGIFLR 375
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: A0A139X085_9CYAN (Transposase n=1 Tax=Scytonema hofmannii PCC 7110 TaxID=128403 RepID=A0A139X085_9CYAN) HSP 1 Score: 103 bits (256), Expect = 4.710e-20 Identity = 71/225 (31.56%), Postives = 119/225 (52.89%), Query Frame = 2
Query: 599 CRLAYCFGRWYIIVP-EKVQIKKERADASVEPRIIGIDPGLRTAFT--CSSNFGDVLEVGIDTRYRFQREHGKKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLLNKVVVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMVR 1258
CRL +G +Y+ +P E Q++ E + R++ +DPG+RT FT S+FG +G + + Q+ K + + T + K +L+KA R + + K+L +L K+I+ L+D +D+I++ + K + +K R LSHY F+Q +K+KA NKVV++ +E+YTS+ G + K+LG AK G +DRD+N I +R
Sbjct: 298 CRLVLAYGDYYLTIPVESPQLETEN-----QGRVVALDPGIRTFFTFLSESSFG---WLGKNANVKIQKLCFKLDELCSGI-SKTRGQLKRRLKKAANRLRGKIKNLVDELQKKSIRFLVDNFDIILLPTFETSQMSKKARRRIRSKSVRQMLTLSHYKFKQFIKHKAFEHNKVVLDVNEAYTSKTVSWSGEIVKNLGGAKIIKSSSTGQTMDRDLNGARGIFLR 513
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: A0A1D1Y5P0_9ARAE (Putative transposase R104 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y5P0_9ARAE) HSP 1 Score: 100 bits (250), Expect = 3.270e-19 Identity = 82/293 (27.99%), Postives = 131/293 (44.71%), Query Frame = 2
Query: 410 RKPFELKFKSRRLTSDSIELEKKSISFEDNTVCFFGSTKKHKLRVDMSEAFSDEPGAHKPSQSCRLAYC-FGRWYIIVPEKVQIKKERADASVEPR---IIGIDPGLRTAFTCSSNFGDVLEVG---IDTRYRFQREHGKKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLLNKV-VVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMVR 1258
RK F +KF+S++ SI + K F HK++ S EP K RL G +Y+ +P ++I+ E +I +DPG+RT T G +E G I YR + K S ++ +K+ +LR+ R + L D H+K K L + Y +I++ + Q ++ + + +K R SHY FRQ L +K+ VV E YTS+ C CG++ K LG +K + C +C +DRD+N NI+++
Sbjct: 287 RKKFNMKFRSKKDPQQSIAILSKHWGKSRGEYSFL-----HKIK-------SSEPLPEKLEYDSRLVLNRLGEYYLCIPRPLEIRAENQGPIFRKEGSGVISLDPGVRTFMTGYDPSGTAVEWGKNDIGRVYRLCHAYDKLQSKRDQIHGKKNKRKRYRLRRVMLRIYKKIHCLVNDCHYKLAKWLCENYRIILLPEFRTQGMVRRGQRRIGSKTARAMCSWSHYRFRQHLVHKSREYPWCQVVICTEEYTSKTCGFCGYIHKKLGGSKEFCCPKCKTNLDRDINGARNILLK 567
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: A0A397GM53_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GM53_9GLOM) HSP 1 Score: 99.8 bits (247), Expect = 8.030e-19 Identity = 79/291 (27.15%), Postives = 131/291 (45.02%), Query Frame = 2
Query: 407 KRKPFELKFKSRRLTSDSIELEKKSISFEDNTVCFFGSTKKHKLRVDMSEAFSDEPGAHKPSQSCRLAYCFGRWYIIVPEKVQIKKERADASVEPRIIGIDPGLRTAFTCSSNFGDVLEVG---IDTRYRFQREHGKKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLLN--KVVVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMVR 1258
KRK F++KF+S++ SI + K F ++ +E E + RL G +Y+ +P+ ++I + + +I +DPG+RT T G +E G I YR + K S + +K+ KL + R + + L D H K K L Y +I++ K Q ++ + + +K RM SH+ FRQ L +K +V++ +E YTS+ C CGH+ + LG +K + C C +DRD+N NI++R
Sbjct: 291 KRKKFKMKFRSKKDQQQSIAILSKHWGKSKGVYTFL-------CKMKSAENLPAELHYYSRLMMNRL----GEFYLCIPQPLEIWAKNQGPTQSDAVIALDPGVRTFITGYDPSGQAVEWGKNDISRIYRLSHIYDKIQSTHNSIHGKVHKQKRYKLCRVMLRIHKKIRCLINDCHHKLAKWLCQSYRIILLPKFQTQGMVRRGKRRIRSKTARMMLTWSHFRFRQYLLHKVREYPWCRVIICTEE-YTSKTCGCCGHIHRKLGGSKVFRCPSCTAELDRDINGARNILLR 569
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Match: A0A0W8DZT6_PHYNI (Transposase IS605 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DZT6_PHYNI) HSP 1 Score: 94.0 bits (232), Expect = 2.260e-17 Identity = 78/281 (27.76%), Postives = 127/281 (45.20%), Query Frame = 2
Query: 422 ELKFKSRRLTSDSIELEKKSISFEDNTVCFFGSTKKHKLRVDMSEAFSDEPGAHKPSQSCRLAYCFG-RWYIIVPEKVQIKKERADASVEPRIIGIDPGLRTAFTCSSNFGDVLEVGIDTRYRFQREHGKKTSIAKKMRDATCVKKKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVVGKIGVQSLMSKTGQ-STSNKRMFSYLSHYSFRQRLKYKAGLLNKVVVEQDESYTSQACFRCGHLKKDLGPAKTYLCRECGLVIDRDVNSGYNIMVR 1258
EL+FKS++ S SIE + I + V F K +E F + S RL ++Y+ +P +V++ K+ + R IDPG+R+ T G L V Y F+R I+++ R+ T +K+ ++ K + R K + AD+H K L Y +++ + S+ + S+ R SHY F+ L YK ++E +E YT++ C CG + + K + C C LVIDRDVN+ NI ++
Sbjct: 89 ELRFKSKKDNSSSIEFRNRGIKSANGLVQF----KPRYFGFSKNEGFLIKEKMPDLQFSVRLLRTRDEKFYLCIP-RVKVFKQ----TTSTRTCAIDPGVRSFITMYDQDGLTLGVDDANEYIFRRCLTIDRLISRRTRE-TNKRKRYRMGKRLTKMFNRVKAMIADMHHKVSSWLSKNYKQVLLPSFQTSDMTSRQKRISSKTSRAILTWSHYKFKMMLAYKMERSGGRMIECEEHYTTKTCSCCGRINYGITSQKVFDCNHCNLVIDRDVNAARNIFLK 359 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig7.15002.1 >prot_E-siliculosus-1a_M_contig7.15002.1 ID=prot_E-siliculosus-1a_M_contig7.15002.1|Name=mRNA_E-siliculosus-1a_M_contig7.15002.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=377bp MNSARQTYNEALRLVKAKKAKANLLLKSATRDLVKNFKSARAAYTARLRKback to top mRNA from alignment at E-siliculosus-1a_M_contig7:9981..11376+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig7.15002.1 ID=mRNA_E-siliculosus-1a_M_contig7.15002.1|Name=mRNA_E-siliculosus-1a_M_contig7.15002.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1396bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:9981..11376+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig7:9981..11376+ >mRNA_E-siliculosus-1a_M_contig7.15002.1 ID=mRNA_E-siliculosus-1a_M_contig7.15002.1|Name=mRNA_E-siliculosus-1a_M_contig7.15002.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2262bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig7:9981..11376+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |