mRNA_E-siliculosus-1a_M_contig69.14997.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig69.14997.1
Unique NamemRNA_E-siliculosus-1a_M_contig69.14997.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig69.14997.1 vs. uniprot
Match: A0A6H5L5T6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T6_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.300e-25
Identity = 67/108 (62.04%), Postives = 74/108 (68.52%), Query Frame = 3 
Query:  333 MLHLRVEPGTPRHLWARTNPREAEDTKRCRASRVPMARPRAVTWSLPGSELKGNSNSICDALSSVEQFHFGIHFNDDVSRVKWPPISE-EGWIRI*RGLDSATTSTGR 653
            MLHLRVEPGTPRHLWAR NPR+AEDTKRC+ SRVPM RPRAVT SL GSE KGN+NSICDA +          ++D +S       S      RI RGL S TTSTGR
Sbjct:    1 MLHLRVEPGTPRHLWARANPRDAEDTKRCKTSRVPMVRPRAVTLSLSGSERKGNNNSICDAQA----------WSDFISASTSTMTSAGSNGPRISRGLGSVTTSTGR 98
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig69.14997.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 9.260e-25
Identity = 67/133 (50.38%), Postives = 79/133 (59.40%), Query Frame = 3 
Query:  192 GPSRCLDALAVALNQADGDGRWRCWYTSTKQAQLASLGFCATFRRVSMLHLRVEPGTPRHLWART-NPREAEDTKRCRASRVPMARPRAVTWSLPGSELKGNSNSICDALSSVEQFHFGIHFNDDVSR-VKWP 584
            GPSRCLDAL +ALNQA G      WYTST Q QLASL  CA+ R + +L L V+ GTP  LW  T   RE    KR   +RVP+ R R VTW LPG  L+   N   DA S V  F  G  F+DD+ R ++WP
Sbjct:    8 GPSRCLDALIIALNQASGGE----WYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALR---NMTGDAWSEVTTFSLGPGFDDDLPRGIQWP 133
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig69.14997.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.470e-23
Identity = 68/142 (47.89%), Postives = 82/142 (57.75%), Query Frame = 3 
Query:  165 TGQATSSTPGPSRCLDALAVALNQADGDGRWRCWYTSTKQAQLASLGFCATFRRVSMLHLRVEPGTPRHLWART-NPREAEDTKRCRASRVPMARPRAVTWSLPGSELKGNSNSICDALSSVEQFHFGIHFNDDVSR-VKWP 584
            +G+ T+   GPSRCLDAL +ALNQA G      WYTST Q QL SL  CA  R + +L L V+ GTP  LW  T   RE    KR   +RVP+ R R VTW LPG  L+   N   DA S V  F  G  F+DD+ R ++WP
Sbjct:   30 SGRHTNVETGPSRCLDALIIALNQASGGE----WYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALR---NMTGDAWSEVTTFSLGPGFDDDLPRGIQWP 164
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig69.14997.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 8.390e-17
Identity = 61/140 (43.57%), Postives = 73/140 (52.14%), Query Frame = 3 
Query:  183 STPGPSRCLDALAVALNQA-DGDGRWRCWYTSTKQAQLASLGFCATFRRVSMLHLRVEPGTPRHLWARTNPREAE------DTKRCRASRVPMARPRAVTWSLPGSELKGNSNSICDALSSVEQFHFGIHFNDDVSRVKW 581
            S  GPSRCLDA  VALNQA DG G    WY ST+Q QL+SL FC   R V  +HL+V+  TP  L++  +   A        +KR  A+RVP  R R VTW L G   +         LSSVE F  G   ND +    W
Sbjct:   23 SIAGPSRCLDAFKVALNQACDGGG----WYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQLSGETPRCTGVG----LSSVELFVLGDAVNDSMDEAVW 154
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig69.14997.1 vs. uniprot
Match: D7FUL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL5_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 2.390e-11
Identity = 57/166 (34.34%), Postives = 81/166 (48.80%), Query Frame = 3 
Query:  105 CASKFEMMVAH*HRSGTTSPTGQATSSTPGPSRCLDALAVALNQA-DGDGRWRCWYTSTKQAQLASLGFCATFRRVSMLHLRVEPGTPRHLWARTNPREAEDTKRCRASRVPMARPRAVTWSLPGSELKGNSNSICD-----ALSSVEQFHFGIHFNDDVSRVKWP 584
            C S  E   AH   SG++     +T+  PG S CL+A+ VAL++  DG    + WYTSTK+ QLASLGFC   R    +HL+V+   PR L A  +           AS   ++  RA T S        +S+ I +     A++ V+   FG  F  ++  V WP
Sbjct:  104 CVSLLEKEDAH-SASGSSPLXXXSTAPGPGRSSCLNAIVVALSETCDG----KSWYTSTKELQLASLGFCTACRNHQTVHLKVDEHIPRRLLAAADAPPP-------ASEAAVSDTRAPTHSASCDVEHADSSGIEEPCTVFAMTDVDHLEFGWDFEGNLEAVAWP 257
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig69.14997.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 4.610e-11
Identity = 52/116 (44.83%), Postives = 61/116 (52.59%), Query Frame = 3 
Query:  222 VALNQADGDGRWRCWYTSTKQAQLASLGFCATFRRVSMLHLRVEPGTPRHLWARTNPREAEDTK---------RCRASRVPMARPRAVTWSLPGSELKGNSNSICDALSSVEQFHF 542
            VALN+  G  +W   Y ST Q QLAS+ FC   R VS LHL VE GTPRHLWA T   +++            R    RVP  RPR VTW+LP S L   S    DA  ++E   F
Sbjct:    2 VALNETYGGKQW---YISTVQLQLASVEFCVACRSVSTLHLTVEEGTPRHLWADTWSDQSDXXXXXXXXXXXGRSVLVRVPPFRPREVTWNLPPSMLSEASK---DAFKNLECMSF 111
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig69.14997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L5T6_9PHAE1.300e-2562.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT95_ECTSI9.260e-2550.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA08_9PHAE1.470e-2347.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFC0_9PHAE8.390e-1743.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUL5_ECTSI2.390e-1134.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG83_9PHAE4.610e-1144.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig69contigE-siliculosus-1a_M_contig69:847457..853745 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size285
Model size2650
Exons2
Ec32 orthologEc-13_002260.1
Ec32 ortholog descriptionHypothetical protein
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig69.14997.1prot_E-siliculosus-1a_M_contig69.14997.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig69 849490..849774 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935896.2627518-UTR-E-siliculosus-1a_M_contig69:847456..8494891622935896.2627518-UTR-E-siliculosus-1a_M_contig69:847456..849489Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig69 847457..849489 -
1696250838.0771775-UTR-E-siliculosus-1a_M_contig69:847456..8494891696250838.0771775-UTR-E-siliculosus-1a_M_contig69:847456..849489Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig69 847457..849489 -
1622935896.2889428-UTR-E-siliculosus-1a_M_contig69:849774..8499141622935896.2889428-UTR-E-siliculosus-1a_M_contig69:849774..849914Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig69 849775..849914 -
1696250838.0994759-UTR-E-siliculosus-1a_M_contig69:849774..8499141696250838.0994759-UTR-E-siliculosus-1a_M_contig69:849774..849914Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig69 849775..849914 -
1622935896.304259-UTR-E-siliculosus-1a_M_contig69:853553..8537451622935896.304259-UTR-E-siliculosus-1a_M_contig69:853553..853745Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig69 853554..853745 -
1696250838.1081579-UTR-E-siliculosus-1a_M_contig69:853553..8537451696250838.1081579-UTR-E-siliculosus-1a_M_contig69:853553..853745Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig69 853554..853745 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622935896.2767284-CDS-E-siliculosus-1a_M_contig69:849489..8497741622935896.2767284-CDS-E-siliculosus-1a_M_contig69:849489..849774Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig69 849490..849774 -
1696250838.0891495-CDS-E-siliculosus-1a_M_contig69:849489..8497741696250838.0891495-CDS-E-siliculosus-1a_M_contig69:849489..849774Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig69 849490..849774 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig69.14997.1

>prot_E-siliculosus-1a_M_contig69.14997.1 ID=prot_E-siliculosus-1a_M_contig69.14997.1|Name=mRNA_E-siliculosus-1a_M_contig69.14997.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=95bp
MLHLRVEPGTPRHLWARTNPREAEDTKRCRASRVPMARPRAVTWSLPGSE
LKGNSNSICDALSSVEQFHFGIHFNDDVSRVKWPPISEEGWIRI*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig69:847457..853745-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig69.14997.1 ID=mRNA_E-siliculosus-1a_M_contig69.14997.1|Name=mRNA_E-siliculosus-1a_M_contig69.14997.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6289bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig69:847457..853745- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTGCCACATGTTCTCGTAGCTCCGAGAGAGACAGACAGAGAGAGAGGGCG
AGAGAGGCAGGCAGGCAGGCAGGCAGACAGAGGGTTTCTACCAGGAGGTC
TATCTGCGCAAGCAAGTTCGAGATGATGGTAGCCCACTGACACAGGAGCG
GCACGACGAGCCCCACGGGCCAGGCGACAAGCTCAACCCCAGGTACTTGT
ACTGTACTTGTATTTGTACATAAAATTTCAAAATTCTCGTAGCTCTACGT
CGTGAAGGTAAGCAGCAAGTAGTTGGTACGGCGGGGTGCTACGACGTCAT
CTGATCCCCGCTACCGAGTGAACCTGTGCATGGTGTAGAGATTCTTCGTC
GAGGAGGTGGGAGAGAGCTGCCGAGCTCTGTCAGCTAGCCTGTGCTGATG
CCATCGACTACAATTATTGCTGTATTGTAGGGGCGGCGGACTTTCGCGCT
CATGAAGCCGATTGGTCAACAGCCATTCAGGATGTTTGGTGTGGAAAAAC
AGAATTCTCGCTGACGCTATGGATTCATTGCTAATCTATCTTAGACTCTC
TTTTCTTCGATAGAGATGGATTCGTTGGGTCATATTGATCAAATAAAAAA
AAAAAAGATACCACGAAGGGTGGGGTTGTTGTGTGTAGTTCCCTGGTTGC
GCTATTACGAATGGCCGCAATATAGGTTTAGTGTGAAGGGGTTCGAGTTC
ACAACGGTGCTCAAGCACCTCGTACATGATTTGCTCATGAGAGCTCTGCA
TAGACGATGTGCGTACCGTGATGATGACCGCAGGCATTCAAATCGACGAT
GTACATAGCACGGTTTTTAATGTGAAGACAACAACAACAACATCATGTAC
GGCAGCGACCCGACGAGTAGGACATACCGTTCGTAGGTGACATGACGTAA
TATACCACACCCCCTGGAACAATTTTCAAAGCTCCTCGATTACTCCTCGA
CGATGAGGATGCTGACATCAAATGATACGTTTTCGGAAAGCGCTCTCTCT
CTCGACGGGATGGGTCCAACGCCGCCATTTGCCGCACCTTTGAAAATCGG
TCCAAAAGGGGTGTGATACCTTGCGTCATGCAACCTACGGTATGTGAGGG
TAGAGCTGCGCTGAAGTTCGCGGCCCCACGCACTCACATACTTACGGAAA
AATAAATACACGCACAGAAAGACTACCCATTCTACTGCAGGCGCTGATTG
GCGGTCACTGCTGTGTGTTCGAAGCGTTCGAGAGTCGGACCGCACAGCAG
AGCTTCAATATTTCTTCTTCTGCAGCTCATTGGAACTCGATCATACCACT
ACTAGATAGGGCGGGGTAATGATCCGCAGGGTAGCATACTCAAACCTTGC
AGTGTAGTCTATGTCTGCGACGCTGATGTGCGCATGCCCACACACAGCAG
CGTGATGAATCGGTTGTAGTGAAGCTACGTGCACCACGGACAGGCATGCG
ACGGGCGCGACGGAGGCTTGAATGTGCGGCCCCAGTTCAAGTCCTTGCAC
TTCACTTGCGGTAGTTTTTTTTTCGGTGATGCCACACACCACAACACACA
CGTACGAAGAACCAAGGTATCAACATTTTCCACCGTGCGGACGCAATCGC
GCACGTGGGGGAAGAGGCACGCGTGCGTCATTTACCTGGCGGCAAGCGTA
TTACACGTCACACCGCCGAGGAGCACCAGCAGCAGCGTAGACATAAGATC
GTGACGGACAGATGCGTGACAGAGAGATGCGTCAGGCTCACAACTTACCC
GCCACATCCAATCCTCTCAAGCCTGTCGAATTTCCCGCGAAATGAAAGCA
ACCAGTCTGCAGTACGTGCAACCCAAAAAGAAAGCCGTTGGTGGACATGA
GATTGACGCGAGAGACCCAGCAGCAGCAACAGTAGCAGGCAGGGCAGACG
GCTTCGCGAAGGCACAGTCAGAAGCGCGGCGCAAGTACGCAACCCGATCC
CGGGCAACCATCCTGATAATGCAGTGACGCTCACGCCCTCCAAGGTTTCT
CTCGATGATGGTATGCATAGGTGTGCTGTCGAATGGGGGAGGTGTGTATA
TCTTGTGTGTGTGTTGTGTCATCACTCTGCCGCTTGAACAGTCAGTTGGA
CCTACTCAACATCAATAACAAACCCGCCAGGTACATCTGGCGCATGGCTA
TTGTTTCGGCCGGTTCTCGATGCACGATGATGGACAATTCGCATGGTCGC
GAGTATCCGGAGGGCGTAGGCTGACATGATCGGGAATCAGACAGACCAAT
ATGTCGCCCGATCCAACTGCTAGAGGGGTCCAGGGTACATGTCCCCTGAC
CCCTGGGGGCAAACGCCTCTTCCGCGGTGGTTGCCCCCATCTAAAACCAG
GCGTTTACTTATCAACACCTCCTCTGGGGCGAAAAATTGATGGAGCTATA
CCATTGCCATTGCCACCCACTGTGAGTGCTGAACCTGATATGCTGATTAT
GGAGCTTGTCATGGATGTTATGTGACACTATTGGATGTTGGAAGCCGCTT
GCGAGATAATTTATGCCGCTTGACGGTCCCCTGGATATCGACTCCACAGA
CATACGCTGCTATAGTCTGTACAGGTGAGACGTATCTTACCCGATTGGAT
GTTGAACAACCTTATGCTTGCTGAGTGGTATACGTACGCGGATCGTAGAC
GTTGCCACGTGTCCCACCTCGGCAAGAGGGACGCCGAATCCGCTTCGCCT
CAATCGCTCCCCTCACGCGTTTTTTTTTCTTCGGCGCCTAAAGGCTAACC
TGGCTTAAATTACGGGAGGAAGCACACCGGAGACGCAACGATCAGGCACG
CGTCGCGTTTTGAGGCTTAGCACACCCACACACTTGCTTGGTTGACACGA
CCTACACACACGGTACCATTGGTGATCTCGCACGCGCAGTCAGAGCGCCG
TAAAAATACCTCAAGTCGGGGCGCCGCCGTAAACCGTGCAAGACCGATGT
GGTCACTGTCGCCGTACAGTCGGGTGGGGCCCGTAAGCGGGGGCAGTCCG
ATGTTGACCAACAACCACTTAGTTGGCTCCAGCAGCAGCTTGCCGAGTAC
CACCAACTGCTCAGTAATATTCACGCCGTTGTGCGTGACTTTACGGCGTT
GCTGGGAGATCCCCTGCTGGAGCGCCCCCCTCAACGCCTGAAAGTTACGG
ATAGCAGCGCGAATATCATTGCCAATTTGGTGGTACTAGGCAAGCTGCTG
CTGGAGCCGACTACGTGGTTGTTGGTCAACATCGGTCTTGTTACGTTTAC
GGCGGCGCCGCGACTCGGTATTTTGACGGTGCTCTTGACTGCCCGACAGG
GGTACGCGTCGGCGCGGCATCACTACGAACGGTCATCGTGAATGCCGGGT
TGCCGGGAGATGCATGGGTGCGATCATCTTTGTGGGCGTCGGCTGCGACC
GTTCCGTGGGCACCAGCGGTTGAGGGTGGTGCCCCGTCAGCTTTTGGCGT
GTTCTTGTTTTGGCGTGGCGTTTGTTGGAGGTGCTACCGGGCCTGGTCAG
GTTGTAATACAGAGCGTGCACGCAAACACGTTGGGCTCAATGAACAGGGG
CTACCACTGCAATGACGAGGCGTGTGAACGATAAACCAATGCCATGGTGG
ACGGGTTAACGTACCGTTTGGACGGCACATGATTGGGGGTGCTGAGCCGC
ACGAAGATCTGACAATGCGACACTGATCTCTCTGCAGGTCCAACAGCTTT
TTTTTGCTTCCACTCCTCCGCAGCAATCTAGAGCGCTCCATTCTCCTCTG
CTGCTGCGCTGATGTAGCCCCTGAGCAATCTAGAGCGGTCCAATTTCTCC
TCGCTGATGCTGCATTGATCTATCTCTGCAGGTCCCAGTCGATGCCTGGA
CGCCCTGGCCGTCGCTCTAAACCAGGCGGACGGCGACGGTAGGTGGCGGT
GCTGGTACACGTCGACCAAGCAGGCACAGCTCGCGTCACTCGGATTTTGC
GCGACCTTCCGCAGGGTGTCGATGCTTCACTTACGGGTGGAGCCCGGCAC
TCCGAGGCATCTGTGGGCCCGCACGAACCCACGTGAAGCGGAAGACACTA
AGAGGTGCAGGGCTTCGCGCGTGCCAATGGCAAGGCCGCGCGCGGTTACG
TGGAGCTTGCCGGGTTCGGAGCTGAAAGGTAACAGCAACAGCATCTGTGA
TGCACTGTCAAGCGTGGAGCAATTTCATTTCGGCATCCACTTCAACGATG
ACGTCAGCCGGGTGAAATGGCCCCCGATATCTGAAGAGGGTTGGATTCGA
ATCTGAAGAGGGTTGGATTCGGCGACAACTTCAACCGGTCGGTGAACCGA
CTGTCTCTGCCTGCGTCCGTGCGATCGATACGCTTCGGTTTCGACTTCGA
GAAGACGCTCACGAAAATGGAGTGGCCTGCATCGCTGCAGGAGCTCTTCC
TGTCCTGCCGTTTCAAGAACAGCATCAAGGGCGTCGTGTGGCCGAACTCG
CTGCGGAAGCTGAATGTAAGCGGTGATCTCAAGACGAGAACGCCGCTGGG
TGGGATCCCGTGGCCGGCATCGCTGCAAGTTTTGCGGATTGGTTGCATGC
GCAATGAGCCGATTGATGAAGTACCGCTGCCCAGGTCCCTGAAACAGCTC
ACTGTTGTCAAAGGCTTCAACCGGCCTATAGACCAGGTCGAATAGCCGCG
GTCGTTGGAGTACTTGGATCTGGGACTACAATTCAACCAGTCTTTGGACG
GGGTTATTCTGCCCAGGTCGTTGCGGTCTTTGACCTTGGGGCCACGCTTT
CACCGCCGCATCGATAAGGTAGTCTGGCCGCCGTCGTTGCAGCAGCTGAC
CTTCCACTCCAACTTCCAGCACCTTGCTGGTGAGATAGCGTGGCCGTCCT
CGTTGCTCGAGATGTTCCTCTGGGACAATTTTCGGCGGGCTGTGGATAAC
GTGCTGTTCCCGGTGTCGCTGCATAGGCTGAGTTTCGGGTGGAACTTCAA
CAGCACCGTCGACACGGTAGCTTGGCCGGCATCGCTACTCGAGCTGAACT
TTGGTGTTTTGTCCAATCAACCCATCGACAACGTTGCGTGGCCGGCGACC
CTGCAGACGCTAGCTCTAGGGCGGAACTTCAACCAGCCCATTCGTAAGGC
CGCGTGGCCGGCGTCCCTGCTACAGCTGTCCTTCGGGCAGCTGTTCAACC
AACCGGTAGACGAATTTTCTTGGCCGCCGTCCCTGCAAGAGCTTCGTTTC
GGGTGCGGCCCTGCTTCTCGTGCGGACCAAAAGCCCTTGGGGACCTTAAC
CACCTACGCCATGATGGGCGACGGCTCTGACTTCAACCAGCCGATAGATA
AAACCACGTGGCCTTCGTCGCTCGCGCGGATTACCTTCGGGCCGTGTTTT
AACCAACCGCTAGACGGCGTCTCCTGGCCGGCTTCGCTTCGGCAGCTGGC
CTTTAGCAGTGACTTCTGCCCGCCCGGCGAGGGGTTCGAGTGGCCGGTGT
CCCTGGAGCGGGTGACGGTCGCTTGCCCGTCTGAACGCGCCCTGCCATCG
TGGCACGGAGTGCAAGTCTTCGGGGTGTGGAGTGCGTGGTGGAGTTGTCA
GGTAATAGCAGGGTGTTCTTGGTGAATCGGCGGGGTGCGTTGTAAGTGTT
CGGGATGTGGAGCGGCTGGTAGGAAAATTATCGGCTTGATAGTAGCATCG
CTTGCTTGATGTAAAGTAGGTGGGCCAGTCTTCGAGGTTGTCGAGTGTCT
GGTGGTCGGACAGAGTTGTCGGCGAATAGCGGAGCGTGCTTGGTGAATCG
GCCGAGGGGTGCGCGAGTCTTTCGGGGATGATGTAGATCGGCTGGTTTGT
GGCAGAGTTGTCGGCTTTGAATTGCAGGGCTTGCTTGATGTAGGTGTGCC
AGTCTTCGCGATGTGGAGTGTCTCATGGTAGGCAAATTGTCGGCTTGTTT
TATGGCAGGGCTTGAGCTTGGTGAATTGCTCGAGGGGTGAGCAAATTTTC
GGGCTGGGGAGCGGCTGGTGGCAGGAGAGTTGTCCGCTTGTGAAACAGCA
GGCCTTTATCTTGGTGTTTGGTGGAGGGGAAGAATGGGCAGGTGAAGACC
GGGCTCCAAATAGCAGAGAGACCAACAGCTTGACGATGCGCTTGAGTATG
CCTAGTTGTGGGTTTCTATAGTCTCTAGCTGTAACATGTTGGCGTGCAGC
GCAGGTAGGTAGGTGCTGGTGTTGATGTTCAAGCTATCTCAGAGATGGGT
CAACATTATAGGTTGACGGTCAGCAAGTGACTTCGTCCCGTCATACATGA
CATGTGGGAGCAAGCAAGAAATTTGGTCACTCACGGAGA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig69:847457..853745-

>mRNA_E-siliculosus-1a_M_contig69.14997.1 ID=mRNA_E-siliculosus-1a_M_contig69.14997.1|Name=mRNA_E-siliculosus-1a_M_contig69.14997.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=570bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig69:847457..853745- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCTTCACTTACGGGTGGAGCCCGGCACTCCGAGGCATCTGTGGGCCCG
CACGAACCCACGTGAAGCGGAAGACACTAAGAGGTGCAGGGCTTCGCGCG
TGCCAATGGCAAGGCCGCGCGCGGTTACGTGGAGCTTGCCGGGTTCGGAG
CTGAAAGGTAACAGCAACAGCATCTGTGATGCACTGTCAAGCGTGGAGCA
ATTTCATTTCGGCATCCACTTCAACGATGACGTCAGCCGGGTGAAATGGC
CCCCGATATCTGAAGAGGGTTGGATTCGAATCTGAATGCTTCACTTACGG
GTGGAGCCCGGCACTCCGAGGCATCTGTGGGCCCGCACGAACCCACGTGA
AGCGGAAGACACTAAGAGGTGCAGGGCTTCGCGCGTGCCAATGGCAAGGC
CGCGCGCGGTTACGTGGAGCTTGCCGGGTTCGGAGCTGAAAGGTAACAGC
AACAGCATCTGTGATGCACTGTCAAGCGTGGAGCAATTTCATTTCGGCAT
CCACTTCAACGATGACGTCAGCCGGGTGAAATGGCCCCCGATATCTGAAG
AGGGTTGGATTCGAATCTGA
back to top