prot_E-siliculosus-1a_F_contig1571.3306.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1571.3306.1
Unique Nameprot_E-siliculosus-1a_F_contig1571.3306.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1248
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3306.1 vs. uniprot
Match: A0A6H5KXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR2_9PHAE)

HSP 1 Score: 570 bits (1470), Expect = 5.170e-182
Identity = 488/685 (71.24%), Postives = 496/685 (72.41%), Query Frame = 0
Query:  153 AGSAEVLEERLAAERAFGSMDQNSGRVSARRLEELLTLLGMPAAQRGAKATESARAAGLLNAPSFSCQEFVDWYLSWLFKKEGPPGGGASSNGTADGQPPTYRPFPGTNGDDDGSLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXAGSGSAPPSDYGDGPIRGGEERLGRFKDLSLGGSDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRQSGGAVGSSGGDGEHCSDHVVENGNRPTQETXXXXXXXXXXXXXXXXXXXXXPPESSSAATTPVTPLPRFQFGVPSQQGAGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGKAPHVGGAGAGAVAREIPPPAAPRSPADMMDVSESPLNPVFGSSSSPGFVFQAGQPRASPSQXXXXXXXXXXXXXXYTAMPXXXXXXXXXXXXXXXSAADPGIPPRAFVFGSSAPAAAAPPAGGVKAIPSXXXXXXXXXXXXXGRFFNVGSSATPSSRSTTMXXXXXXXXXXXXXPAFTFGGKPNGVPATGRQPAPAGSSSAGSGVTFSTGTVSNAGPGRRGQRGRPTSASXXXXXXXXXXXXXXXXGARDWHGSGGGGFGAVEQEGLKGAGVQDAFTSETDQRPAATSLKSPLATATGFFASMLSPR 837
            AGSAEVLEERLAAERAF SMDQNSGRVSARRLEELLTLLGMPAAQRGAKATESARAAGLL+APSFSCQEFVDWYLSWLFK+EGPP  GASSNGTADG+PP YRPFPGTNGDD       XXXXXXXXXXXXXXXXXXXXXXX      G+APPSDYGDGP+RGGEERLGR   LSL  SDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXVGRQSGGAVGS GGDGEHCSDHVVENG+RPTQET                     PPESSSAA  P TPLPRFQFGVPS QG  AP                                        AA GKAP VGGAG           AAP SPA+MMDVSESPLNPVFGSS+SPGFVFQAGQPRASPSQXXXXXXXXXXXXX YTAMP XXXXXXXXXXXXXX                                  XXXXXXXXXXXXXGRFFNVGSS TP SRST M             PAFTFGGKPNGVPATGRQ  PAGSS  G GVTFSTGTVSNAGPGRRGQRGRPTSAS           XXXXXG RDWHGSGGGGFGAVEQEGLKG G QD FT ETDQRPAAT LKSPLATAT FFASMLSPR
Sbjct:   38 AGSAEVLEERLAAERAFSSMDQNSGRVSARRLEELLTLLGMPAAQRGAKATESARAAGLLSAPSFSCQEFVDWYLSWLFKEEGPPREGASSNGTADGRPPIYRPFPGTNGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GAAPPSDYGDGPLRGGEERLGR---LSLASSDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCPQRSKPRXXXXXXVGRQSGGAVGSGGGDGEHCSDHVVENGSRPTQETGEGTSSSTGEVSGATSSEATRPPESSSAAAAPATPLPRFQFGVPSLQGTRAPGSGALSSAHRAHGRGAPGRGVKSARAGSARGSSASVLSAAAAAGKAPRVGGAGXXXXXXXXXXXAAPSSPAEMMDVSESPLNPVFGSSNSPGFVFQAGQPRASPSQXXXXXXXXXXXXXAYTAMPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXGRFFNVGSSVTPLSRSTAMPQARPATPPQSRPPAFTFGGKPNGVPATGRQLTPAGSSLPGGGVTFSTGTVSNAGPGRRGQRGRPTSASSLATPSRSSNTXXXXXGERDWHGSGGGGFGAVEQEGLKGVGAQDTFTGETDQRPAATPLKSPLATATSFFASMLSPR 707          
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3306.1 vs. uniprot
Match: D7G9I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I6_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 1.030e-45
Identity = 111/135 (82.22%), Postives = 114/135 (84.44%), Query Frame = 0
Query: 1083 GSPPAGARQGVSXXXXXXXXXXFRFRAGAAGQ--QEQRQDGGTPTGRSSAQEFMQQQRGHLRQHGNTEAGEELTFDEPAMAPVNPGPLPTRLGTGFSFGQTAAPSAAGSRGTGKRRAGTRSQDKKLPQSRPARTG 1215
            GSPPAGARQGVS  XXXXXXXX            QEQR+DG T TGRSSAQEFMQQQRGH RQHGN E GEEL+FDEPAMAPVN GPLPTRLGTGFSFGQTAAPSAAGSRG+GKRRAGTRSQDKKLPQSRPAR G
Sbjct:    3 GSPPAGARQGVSPPXXXXXXXXXXXXXXXXXXXXQEQRKDGDTATGRSSAQEFMQQQRGHQRQHGNAENGEELSFDEPAMAPVNSGPLPTRLGTGFSFGQTAAPSAAGSRGSGKRRAGTRSQDKKLPQSRPARMG 137          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1571.3306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXR2_9PHAE5.170e-18271.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9I6_ECTSI1.030e-4582.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1571contigE-siliculosus-1a_F_contig1571:22362..29048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1571.3306.1mRNA_E-siliculosus-1a_F_contig1571.3306.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1571 22362..29048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1571.3306.1 ID=prot_E-siliculosus-1a_F_contig1571.3306.1|Name=mRNA_E-siliculosus-1a_F_contig1571.3306.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1248bp
MEDVRQRLGGMGLSGVTLEQLSGVEWKLGELKARNQLFEGGGIDDDIDAT
GLRLGGVHFGASPDKTGQVPLSSIPPIPAPSKGRGGGGGGGGGGTAAATP
NGFNTPSSRPAWARKVPVVGGGDSAGGVSTAAAATGRNYGGVPPPPPPPP
PPAGSAEVLEERLAAERAFGSMDQNSGRVSARRLEELLTLLGMPAAQRGA
KATESARAAGLLNAPSFSCQEFVDWYLSWLFKKEGPPGGGASSNGTADGQ
PPTYRPFPGTNGDDDGSLLSSSSSDDDDDDADNDDDDDDDDDDEDSDAGS
GSAPPSDYGDGPIRGGEERLGRFKDLSLGGSDGDDEGGAAVAAAATAALR
AAAVAYASRSSSSSSSSNNNISANNENSDPSRPRRSKSRQTAAAAAAAAV
GRQSGGAVGSSGGDGEHCSDHVVENGNRPTQETGEGSSSSTGEASGATSS
EAIGPPESSSAATTPVTPLPRFQFGVPSQQGAGAPGSGAPSAAHRAHGRG
AAGRGVKSARAGSARGSSASVSSAAAATGKAPHVGGAGAGAVAREIPPPA
APRSPADMMDVSESPLNPVFGSSSSPGFVFQAGQPRASPSQQQQQQPPPP
SPPPAYTAMPVPPAAAAPAPAPAPASAADPGIPPRAFVFGSSAPAAAAPP
AGGVKAIPSPSTGLKPIPSPSAGRFFNVGSSATPSSRSTTMPQARPAAVP
QSRPPAFTFGGKPNGVPATGRQPAPAGSSSAGSGVTFSTGTVSNAGPGRR
GQRGRPTSASSSTTPSRSSNTPPPPPGARDWHGSGGGGFGAVEQEGLKGA
GVQDAFTSETDQRPAATSLKSPLATATGFFASMLSPRRKAAAAAAAAVTA
AAAAAAHDDDADAAFPDQTATTSAGPAGVASAPSGAAAGAPQQEKSADQA
AAPAYQPLREDVVPPPLWTVPGGGGGGGNGGGGSRGNGRGGGPSSFAPEQ
SPPSAASSPFSPMPSSSGASSFSPATASPSSSAYFTPEGAAGRRASVAPP
PPPHATGSGGGGLRSSSSSSVRKISARNLAAAAAARGVSSEEEGPAINGE
RRQQRQHPPPGSAAALAPAPAASAPPPFVFMFGSPPAGARQGVSPPPPPP
PPPRFRFRAGAAGQQEQRQDGGTPTGRSSAQEFMQQQRGHLRQHGNTEAG
EELTFDEPAMAPVNPGPLPTRLGTGFSFGQTAAPSAAGSRGTGKRRAGTR
SQDKKLPQSRPARTGGGGSASSVDVSLLRRQQHQHMQKMQEPTAHGGG
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