prot_E-siliculosus-1a_F_contig1569.3292.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1569.3292.1
Unique Nameprot_E-siliculosus-1a_F_contig1569.3292.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length178
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: D8LG05_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG05_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 6.460e-79
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0
Query:   55 MMSEDFGEEDSFGARAMQERTRAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            MMSEDFGEEDSFGARAMQERT AELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS
Sbjct:    1 MMSEDFGEEDSFGARAMQERTHAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 123          
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: A0A836CAV6_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV6_9STRA)

HSP 1 Score: 157 bits (396), Expect = 3.420e-46
Identity = 76/112 (67.86%), Postives = 91/112 (81.25%), Query Frame = 0
Query:   66 FGARAMQERTRAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            F   A QER  A    +V+ + IL F+KGNR+ PQCGYSGT+V IL  L VP+ETVDV+AD+RIR+G+KDFSNWPTIPQLYL GEF+GGADIVIEL+Q+GEL E IE+AAAS
Sbjct:   28 FSGAATQERIAA----LVADNPILVFMKGNRMFPQCGYSGTVVQILNQLGVPYETVDVMADDRIREGVKDFSNWPTIPQLYLNGEFVGGADIVIELYQTGELLEQIEIAAAS 135          
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: K8GGZ7_9CYAN (Glutaredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepID=K8GGZ7_9CYAN)

HSP 1 Score: 149 bits (376), Expect = 1.550e-43
Identity = 67/103 (65.05%), Postives = 87/103 (84.47%), Query Frame = 0
Query:   75 TRAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            T+A + E++ S+ I+ F+KGN+LMPQCG+S  +V IL  L VP+ETVDVLAD  IRQGIK++SNWPTIPQ+Y+ GEFIGG+DI+IEL+Q GELQ+M+EVA AS
Sbjct:    5 TQARIDELIQSNKIMVFMKGNKLMPQCGFSNNVVQILNVLGVPYETVDVLADPEIRQGIKEYSNWPTIPQVYINGEFIGGSDIMIELYQKGELQQMVEVALAS 107          
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: B7K8Z1_GLOC7 (Glutaredoxin n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7K8Z1_GLOC7)

HSP 1 Score: 148 bits (374), Expect = 3.880e-43
Identity = 68/102 (66.67%), Postives = 86/102 (84.31%), Query Frame = 0
Query:   76 RAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            +A + ++V  + IL F+KGN+LMPQCG+S  +V IL  L VPFETVDVLAD  IRQGIK++SNWPTIPQ+Y+ GEF+GG+DI+IEL+QSGELQEM+EVA AS
Sbjct:   13 KARIDKLVKDNKILVFMKGNKLMPQCGFSNNVVQILSVLGVPFETVDVLADFEIRQGIKEYSNWPTIPQVYINGEFVGGSDIMIELYQSGELQEMVEVALAS 114          
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: YC64L_SYNY3 (Uncharacterized monothiol glutaredoxin ycf64-like n=5 Tax=Synechocystis TaxID=1142 RepID=YC64L_SYNY3)

HSP 1 Score: 147 bits (370), Expect = 1.270e-42
Identity = 64/107 (59.81%), Postives = 89/107 (83.18%), Query Frame = 0
Query:   71 MQERTRAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            M   T+A + ++V+++ ++ F+KG +LMPQCG+S  +V IL  L +PFET+DVLAD  IRQGIK++SNWPTIPQ+Y+ GEF+GG+DI+IEL+Q+GELQEM+EVA AS
Sbjct:    1 MNPETKARIDQLVTANKVMVFMKGTKLMPQCGFSNNVVQILNMLGIPFETLDVLADAEIRQGIKEYSNWPTIPQVYVNGEFVGGSDIMIELYQNGELQEMLEVALAS 107          
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: A0A2T2VXY6_9CYAN (Glutaredoxin n=16 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A2T2VXY6_9CYAN)

HSP 1 Score: 147 bits (370), Expect = 1.270e-42
Identity = 65/107 (60.75%), Postives = 88/107 (82.24%), Query Frame = 0
Query:   71 MQERTRAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            M   T+  L +++ ++ I+ F+KGN+LMPQCG+S  +V IL  L VPFETVDVLAD  IRQGIK++SNWPTIPQ+Y+ GEF+GG+DI+IEL+Q+G+LQEM+E+A AS
Sbjct:    1 MDSATKERLDQLIQNNTIMVFMKGNKLMPQCGFSNNVVQILNVLGVPFETVDVLADPDIRQGIKEYSNWPTIPQVYINGEFVGGSDILIELYQNGKLQEMVEIAMAS 107          
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: A0A251WAT5_9CYAN (Glutaredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A251WAT5_9CYAN)

HSP 1 Score: 147 bits (370), Expect = 1.270e-42
Identity = 66/107 (61.68%), Postives = 86/107 (80.37%), Query Frame = 0
Query:   71 MQERTRAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            M    +  + ++V++H I+ F+KGN+LMPQCG+S  +V IL  L VPFET DVL+D  IRQGIKD+SNWPTIPQ+Y+ GEFIGG+DI+IEL+Q GELQ+M+EVA AS
Sbjct:    1 MTPEVKQRIDDLVNNHKIMVFMKGNKLMPQCGFSNNVVQILNVLGVPFETFDVLSDYEIRQGIKDYSNWPTIPQVYMNGEFIGGSDIMIELYQKGELQQMVEVALAS 107          
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: A0A1E5QGL9_9CYAN (Glutaredoxin n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QGL9_9CYAN)

HSP 1 Score: 147 bits (370), Expect = 1.270e-42
Identity = 67/107 (62.62%), Postives = 87/107 (81.31%), Query Frame = 0
Query:   71 MQERTRAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            M    + ++  +V+ + IL F+KGN+LMPQCG+S  +V IL +L VPFETVDVLAD  IRQGIK++SNWPTIPQ+Y+ GEF+GG+DI+IEL+Q GELQEM+EVA AS
Sbjct:    1 MTPEAQEKIDSLVNQNKILVFMKGNKLMPQCGFSNNVVQILNALGVPFETVDVLADPDIRQGIKEYSNWPTIPQVYINGEFVGGSDIMIELYQKGELQEMVEVALAS 107          
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: UPI0007399CED (Grx4 family monothiol glutaredoxin n=1 Tax=Synechococcales cyanobacterium M55_K2018_004 TaxID=2774347 RepID=UPI0007399CED)

HSP 1 Score: 147 bits (370), Expect = 1.270e-42
Identity = 66/107 (61.68%), Postives = 86/107 (80.37%), Query Frame = 0
Query:   71 MQERTRAELQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            M    + ++  +V+ H I+ F+KGN+LMPQCG+S  +V IL  L VPFETVDVLAD  IRQGIK++SNWPTIPQ+Y+ GEFIGG+DI++EL+Q GELQ+M+EVA AS
Sbjct:    1 MTPELKQQIDNIVNQHKIVVFMKGNKLMPQCGFSNNVVQILNVLGVPFETVDVLADPEIRQGIKEYSNWPTIPQVYINGEFIGGSDIMVELYQKGELQQMVEVALAS 107          
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Match: D8FTI6_9CYAN (Glutaredoxin n=2 Tax=Oscillatoriales TaxID=1150 RepID=D8FTI6_9CYAN)

HSP 1 Score: 146 bits (369), Expect = 1.800e-42
Identity = 64/99 (64.65%), Postives = 84/99 (84.85%), Query Frame = 0
Query:   79 LQEMVSSHNILAFIKGNRLMPQCGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGEFIGGADIVIELFQSGELQEMIEVAAAS 177
            ++ +V  + +L F+KGN+LMPQCG+S  +V IL +L VPFETVDVLAD  IRQG+K++SNWPTIPQ+Y+ GEF+GG+DI+IEL+Q GELQEM+EVA AS
Sbjct:    9 IESLVKQNKVLVFMKGNKLMPQCGFSNNVVQILNTLGVPFETVDVLADPEIRQGVKEYSNWPTIPQVYINGEFVGGSDIMIELYQKGELQEMVEVALAS 107          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG05_ECTSI6.460e-7999.19Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A836CAV6_9STRA3.420e-4667.86Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
K8GGZ7_9CYAN1.550e-4365.05Glutaredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepI... [more]
B7K8Z1_GLOC73.880e-4366.67Glutaredoxin n=1 Tax=Gloeothece citriformis (strai... [more]
YC64L_SYNY31.270e-4259.81Uncharacterized monothiol glutaredoxin ycf64-like ... [more]
A0A2T2VXY6_9CYAN1.270e-4260.75Glutaredoxin n=16 Tax=Cyanobacteria/Melainabacteri... [more]
A0A251WAT5_9CYAN1.270e-4261.68Glutaredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepI... [more]
A0A1E5QGL9_9CYAN1.270e-4262.62Glutaredoxin n=2 Tax=unclassified Desertifilum Tax... [more]
UPI0007399CED1.270e-4261.68Grx4 family monothiol glutaredoxin n=1 Tax=Synecho... [more]
D8FTI6_9CYAN1.800e-4264.65Glutaredoxin n=2 Tax=Oscillatoriales TaxID=1150 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 78..173
e-value: 1.6E-30
score: 106.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 91..152
e-value: 9.3E-16
score: 57.8
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 76..177
score: 24.863
IPR004480Monothiol glutaredoxin-relatedTIGRFAMTIGR00365TIGR00365coord: 77..172
e-value: 6.3E-39
score: 130.1
IPR004480Monothiol glutaredoxin-relatedPANTHERPTHR10293GLUTAREDOXIN FAMILY MEMBERcoord: 74..171
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 76..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1569contigE-siliculosus-1a_F_contig1569:26188..30017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1569.3292.1mRNA_E-siliculosus-1a_F_contig1569.3292.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1569 26117..30396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1569.3292.1 ID=prot_E-siliculosus-1a_F_contig1569.3292.1|Name=mRNA_E-siliculosus-1a_F_contig1569.3292.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=178bp
MVMFPNYAVLFLVWNALTTARVLGFVLRPPVGFGHLDRSPAQARHVVSSA
TRLGMMSEDFGEEDSFGARAMQERTRAELQEMVSSHNILAFIKGNRLMPQ
CGYSGTLVNILQSLSVPFETVDVLADERIRQGIKDFSNWPTIPQLYLGGE
FIGGADIVIELFQSGELQEMIEVAAAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR004480Monothiol_GRX-rel
IPR002109Glutaredoxin