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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3291.1 vs. uniprot
Match: D8LG06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG06_ECTSI) HSP 1 Score: 343 bits (880), Expect = 2.650e-103 Identity = 208/217 (95.85%), Postives = 211/217 (97.24%), Query Frame = 0
Query: 1 MAQNRPGGWAAASLPESLMALLVLACSARGGSGFVGGPISGPMSKGSAARGPSHSAIPTHPACDGAAGGVYHSSPMRRHARSYCRAAPKLRAATAVVTMQGAARSNSRSARKLQAALREAATTGKWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCXXXXXXXXXXXXXXXXXXXXXXXXADREVVPDEIS 217
MAQNRPGGWAAASLPESL+ALLV ACSARGGSGFVGGPISGPMSKGSAARGPSHSAIP HPAC GAAGGVYHSSPMRRHARS CRAAPKL ATAVVTMQGAAR+NSR+ARKLQAALREAATTGKWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCXXXXXXXXXXXXXXXXXXXXXXXXADREVVPDEIS
Sbjct: 1 MAQNRPGGWAAASLPESLLALLVFACSARGGSGFVGGPISGPMSKGSAARGPSHSAIPAHPACGGAAGGVYHSSPMRRHARSCCRAAPKLGEATAVVTMQGAARANSRAARKLQAALREAATTGKWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCXXXXXXXXXXXXXXXXXXXXXXXXADREVVPDEIS 217
BLAST of mRNA_E-siliculosus-1a_F_contig1569.3291.1 vs. uniprot
Match: A0A6H5K762_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K762_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 4.380e-5 Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 0
Query: 100 QGAARSNSRSARKLQAALREAATTGKWREALGILDEMKE--GGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNV 180
QGA + ++S +++ L ++ +G WR+AL +D MK+ G ++ SY AIT CGR GQWE+A+ LLRE+P EG +P++
Sbjct: 124 QGAVEAGTKSLTEMKKMLYDS-RSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPT-EGAAPDL 204
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13812 | PPR_3 | coord: 132..191
e-value: 5.1E-5
score: 23.3
coord: 271..332
e-value: 3.5E-10
score: 39.8 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13041 | PPR_2 | coord: 633..680
e-value: 8.6E-12
score: 45.1
coord: 493..540
e-value: 1.6E-11
score: 44.2
coord: 563..610
e-value: 2.2E-14
score: 53.4
coord: 388..436
e-value: 1.7E-10
score: 40.9
coord: 213..261
e-value: 9.5E-11
score: 41.7 |
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 216..250
e-value: 2.9E-7
score: 28.2
coord: 566..600
e-value: 2.7E-8
score: 31.5
coord: 321..355
e-value: 1.3E-5
score: 23.0
coord: 145..180
e-value: 1.4E-6
score: 26.1
coord: 496..529
e-value: 1.5E-7
score: 29.2
coord: 289..320
e-value: 7.0E-8
score: 30.2
coord: 181..215
e-value: 6.9E-5
score: 20.8
coord: 464..495
e-value: 1.1E-5
score: 23.2
coord: 358..390
e-value: 7.7E-6
score: 23.8
coord: 707..736
e-value: 7.1E-4
score: 17.6
coord: 426..460
e-value: 3.5E-7
score: 28.0
coord: 671..704
e-value: 2.7E-6
score: 25.2
coord: 636..670
e-value: 4.0E-9
score: 34.1
coord: 392..425
e-value: 8.8E-8
score: 29.9
coord: 251..283
e-value: 2.5E-9
score: 34.7
coord: 601..634
e-value: 2.8E-8
score: 31.4
coord: 531..565
e-value: 4.4E-8
score: 30.8 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF01535 | PPR | coord: 463..490
e-value: 0.015
score: 15.5
coord: 357..385
e-value: 4.0E-4
score: 20.4
coord: 707..736
e-value: 0.0023
score: 18.1 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 109..139
score: 5.656 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 424..458
score: 12.386 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 634..668
score: 13.45 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 249..283
score: 14.228 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 564..598
score: 13.055 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 459..493
score: 11.246 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 354..388
score: 11.29 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 529..563
score: 13.121 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 214..248
score: 12.375 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 143..178
score: 9.01 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 389..423
score: 12.891 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 494..528
score: 12.255 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 669..703
score: 11.104 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 284..318
score: 11.729 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 704..738
score: 9.909 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 599..633
score: 12.715 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 179..213
score: 10.282 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 319..353
score: 11.17 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 646..753
e-value: 4.7E-27
score: 96.5
coord: 329..434
e-value: 3.0E-34
score: 119.9
coord: 224..328
e-value: 1.7E-37
score: 130.5
coord: 80..223
e-value: 3.7E-30
score: 106.6
coord: 539..645
e-value: 4.6E-39
score: 135.6
coord: 435..538
e-value: 9.6E-35
score: 121.6 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 474..620 |
| None | No IPR available | PANTHER | PTHR46128:SF17 | | coord: 121..362 |
| None | No IPR available | PANTHER | PTHR46128 | FAMILY NOT NAMED | coord: 121..362 |
| None | No IPR available | PANTHER | PTHR46128 | FAMILY NOT NAMED | coord: 471..738
coord: 367..608
coord: 253..502 |
| None | No IPR available | PANTHER | PTHR46128:SF17 | | coord: 471..738
coord: 367..608
coord: 253..502 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..33
score: 0.679 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig1569.3291.1 ID=prot_E-siliculosus-1a_F_contig1569.3291.1|Name=mRNA_E-siliculosus-1a_F_contig1569.3291.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=756bp
MAQNRPGGWAAASLPESLMALLVLACSARGGSGFVGGPISGPMSKGSAAR
GPSHSAIPTHPACDGAAGGVYHSSPMRRHARSYCRAAPKLRAATAVVTMQ
GAARSNSRSARKLQAALREAATTGKWREALGILDEMKEGGVVCAHSYTTA
ITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAV
SLLREMADREVVPDEISYNSAIKACGRGGQWERAIGLLREMPSVGLTPDA
ITYNSVITGCGKEGQWKEALSLLREMPDKGLTPETISSNMAIRACGRSGR
WKEAVEVLRQMESQGVAPNAISYNAAIKACGGGGQWETSVDLLDEMAGRG
VAPNTIHFNSAIAACGKGGQWEKAVELLREVTARGLTPDATSYNSAIAAC
TKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQ
MPAKGLTPDVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNS
AIKACGKGGQWEKALDLLAKMKELAMAPDSITYNSAIAACSKRGRWKEAV
ALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNV
ITYNSVIKACGRGGEWEKALDLLKELKETAIAPDLISYNLAISACSKRGR
WEEALDLLREMPAEGLTPDVVSYTSAIRACNAEGEWEKALGLLNLMDAHG
VSPTATSYSLAIEACGKGGRREEAVSLVREMAQRGLSHRNISNSLIVEVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011990 | TPR-like_helical_dom_sf |
| IPR002885 | Pentatricopeptide_repeat |
|