prot_E-siliculosus-1a_F_contig15519.3194.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig15519.3194.1
Unique Nameprot_E-siliculosus-1a_F_contig15519.3194.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length185
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: G4F2C3_9GAMM (ABC-3 protein n=16 Tax=root TaxID=1 RepID=G4F2C3_9GAMM)

HSP 1 Score: 327 bits (839), Expect = 6.440e-111
Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMRQWRRWRMG 184
            FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVL+VASGGTIVLVATSWFF+ALLFSPK G+LMRQWRRWRMG
Sbjct:  124 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLDVASGGTIVLVATSWFFMALLFSPKQGVLMRQWRRWRMG 307          
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: A0A0P7YSG1_9GAMM (Manganese/iron transport system permease protein n=6 Tax=Halomonas TaxID=2745 RepID=A0A0P7YSG1_9GAMM)

HSP 1 Score: 306 bits (784), Expect = 1.380e-102
Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMRQWRRWRMG 184
            FTGAFALGIVIISKIASSTHLMHILFGNVLGV++SAL+LTLVASVIALLVVWL +RPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRF++MMLISV VGVSSAVIGLWLS  L+VASGGTIVLVAT WFF AL+FSP+HG+L RQWRRWRM 
Sbjct:  124 FTGAFALGIVIISKIASSTHLMHILFGNVLGVRESALVLTLVASVIALLVVWLCFRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFRSMMLISVAVGVSSAVIGLWLSAALDVASGGTIVLVATGWFFAALVFSPRHGVLARQWRRWRMS 307          
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: A0A3T1DPN0_9GAMM (Iron ABC transporter permease n=3 Tax=Halomonas TaxID=2745 RepID=A0A3T1DPN0_9GAMM)

HSP 1 Score: 298 bits (764), Expect = 2.090e-99
Identity = 168/176 (95.45%), Postives = 172/176 (97.73%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMR 176
            FT AFALGIVIISKIASSTHLMHILFGNVLGV+QSALLLTLVASVIALLVVWLAYRPLLLYAFDP QAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVL+VASGGTIVLVATSWFF+ALLFSPK G+L R
Sbjct:  127 FTSAFALGIVIISKIASSTHLMHILFGNVLGVKQSALLLTLVASVIALLVVWLAYRPLLLYAFDPLQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLDVASGGTIVLVATSWFFMALLFSPKQGVLAR 302          
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: A0A7Y3TVV7_9GAMM (Metal ABC transporter permease n=2 Tax=Halomonas TaxID=2745 RepID=A0A7Y3TVV7_9GAMM)

HSP 1 Score: 295 bits (756), Expect = 1.360e-98
Identity = 158/183 (86.34%), Postives = 173/183 (94.54%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMRQWRRWRM 183
            FTGAFALGIVIISKIA+STHLMHILFGNVLGVQ + +LLTL ASVI LLV+WLAYRPLLLY FDPQQAQALGFNTS++HYGLILLLTLTIVASLETVGIILVVAMLITPGATAH+LTDRF TM+ +SV VGVSSAV+GLWLSVVL+VASGG+IVLVAT  FF+ALLFSPKHG++MRQWRRWRM
Sbjct:  105 FTGAFALGIVIISKIATSTHLMHILFGNVLGVQPTNMLLTLAASVITLLVIWLAYRPLLLYTFDPQQAQALGFNTSIVHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHMLTDRFATMLWLSVAVGVSSAVLGLWLSVVLDVASGGSIVLVATGLFFLALLFSPKHGVIMRQWRRWRM 287          
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: A0A7X4FZN5_9GAMM (Iron chelate uptake ABC transporter family permease subunit n=3 Tax=Halomonas TaxID=2745 RepID=A0A7X4FZN5_9GAMM)

HSP 1 Score: 292 bits (748), Expect = 2.560e-97
Identity = 161/183 (87.98%), Postives = 172/183 (93.99%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMRQWRRWRM 183
            FTGAFA+GIVI+SKIASSTHL+HILFGNVLGVQ SALLLTLVA VI LLVVWLAYRPL+LYAFDPQQAQALGFNT VIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRF TM+ ISV VGVS+AV+GLWLS VL+VASGGTIVLVAT  FF+ALLFSPKHG++MRQWRR RM
Sbjct:  109 FTGAFAVGIVIVSKIASSTHLLHILFGNVLGVQPSALLLTLVAGVITLLVVWLAYRPLMLYAFDPQQAQALGFNTGVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFATMLAISVMVGVSAAVLGLWLSFVLDVASGGTIVLVATGLFFLALLFSPKHGVIMRQWRRRRM 291          
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: A0A455VDD7_9GAMM (Iron ABC transporter permease n=1 Tax=Halomonas axialensis TaxID=115555 RepID=A0A455VDD7_9GAMM)

HSP 1 Score: 290 bits (743), Expect = 3.060e-97
Identity = 158/184 (85.87%), Postives = 169/184 (91.85%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMRQWRRWRMG 184
            FTGAFALG+V+ISKIASSTHLMHILFGNVLGVQQSALLLTL AS++ALLVVWLAYRPL+LYAFDP QAQALGFNT VIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTM+ ISVG+GV SAV+GLWLS   +VASGGTIVLVAT  FF ALLFSPKHG+LMR WR   +G
Sbjct:   60 FTGAFALGVVLISKIASSTHLMHILFGNVLGVQQSALLLTLAASLVALLVVWLAYRPLMLYAFDPTQAQALGFNTGVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMLFISVGIGVGSAVLGLWLSFAFDVASGGTIVLVATGCFFTALLFSPKHGVLMRLWRHRSLG 243          
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: F7SSJ0_9GAMM (ABC-3 protein n=31 Tax=Halomonadaceae TaxID=28256 RepID=F7SSJ0_9GAMM)

HSP 1 Score: 291 bits (746), Expect = 1.250e-96
Identity = 159/184 (86.41%), Postives = 172/184 (93.48%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMRQWRRWRMG 184
            FTGAFALGIV+ISKIASSTHLMHILFGNVLGVQQSALLLTL AS++ALLVVWLA+RPL+LYAFDP QAQALGFNT +IHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTM+LISV VGV SAVIGLWLS  L+VASGGTIVLVAT  FF+ALLFSP+HG+LMR WR  ++G
Sbjct:  130 FTGAFALGIVLISKIASSTHLMHILFGNVLGVQQSALLLTLAASLVALLVVWLAFRPLMLYAFDPTQAQALGFNTGIIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMLLISVAVGVGSAVIGLWLSYALDVASGGTIVLVATGCFFLALLFSPRHGVLMRLWRHRKIG 313          
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: A0A8H9I737_9GAMM (Iron ABC transporter permease n=3 Tax=Halomonadaceae TaxID=28256 RepID=A0A8H9I737_9GAMM)

HSP 1 Score: 289 bits (739), Expect = 1.010e-95
Identity = 156/184 (84.78%), Postives = 172/184 (93.48%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMRQWRRWRMG 184
            FTGAFALGIV+ISK+ASSTHLMHILFGNVLGVQQSAL+LTL ASV+ALLV+WLA+RPL+LYAFDP QAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRF TM+LIS  VGV SAV+GLWLS   +VASGGTIVLVATS FF+ALLFSP+HG+LMR+WR  ++G
Sbjct:  125 FTGAFALGIVLISKMASSTHLMHILFGNVLGVQQSALMLTLAASVVALLVIWLAFRPLMLYAFDPTQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFTTMLLISTSVGVGSAVLGLWLSYAFDVASGGTIVLVATSCFFLALLFSPRHGVLMRRWRHRQLG 308          
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: H0IXK6_9GAMM (ABC-3 protein n=4 Tax=Halomonas TaxID=2745 RepID=H0IXK6_9GAMM)

HSP 1 Score: 288 bits (736), Expect = 3.170e-95
Identity = 156/179 (87.15%), Postives = 171/179 (95.53%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMRQWR 179
            FTGAFALGIV+ISKIASSTHLMHILFGNVLGVQQSALLLTL ASV+AL+VVWLA+RPL+LYAFDP QAQALGFNT +IHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTM+L+S+GVGV SAV+GL+LS   +VASGGTIVLVATS FF+ALLFSPKHG+LMR+WR
Sbjct:  128 FTGAFALGIVLISKIASSTHLMHILFGNVLGVQQSALLLTLAASVVALIVVWLAFRPLMLYAFDPTQAQALGFNTGIIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMLLLSMGVGVGSAVLGLYLSFAFDVASGGTIVLVATSCFFMALLFSPKHGVLMRKWR 306          
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Match: A0A1R4HPQ3_9GAMM (Zinc ABC transporter, inner membrane permease protein ZnuB n=13 Tax=Halomonas TaxID=2745 RepID=A0A1R4HPQ3_9GAMM)

HSP 1 Score: 284 bits (726), Expect = 1.010e-93
Identity = 151/184 (82.07%), Postives = 169/184 (91.85%), Query Frame = 0
Query:    1 FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLVVWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASGGTIVLVATSWFFIALLFSPKHGLLMRQWRRWRMG 184
            FT +FALG+VIISK+ASSTHLMHILFGNVLGV+ SAL+LT VAS+IA+L VWLAYRPLLLYAFDPQQAQALGFNT +IHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRF  M+LISV +G+ SAVIGLWLSVV NVASGG+IVLVA ++F +ALLFSPK G++ RQWR W+MG
Sbjct:  128 FTASFALGVVIISKLASSTHLMHILFGNVLGVKHSALMLTFVASIIAILTVWLAYRPLLLYAFDPQQAQALGFNTQIIHYGLILLLTLTIVASLETVGIILVVAMLITPGATAHLLTDRFTIMLLISVSIGILSAVIGLWLSVVFNVASGGSIVLVAFAFFILALLFSPKQGIVPRQWRHWKMG 311          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15519.3194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G4F2C3_9GAMM6.440e-11197.83ABC-3 protein n=16 Tax=root TaxID=1 RepID=G4F2C3_9... [more]
A0A0P7YSG1_9GAMM1.380e-10290.22Manganese/iron transport system permease protein n... [more]
A0A3T1DPN0_9GAMM2.090e-9995.45Iron ABC transporter permease n=3 Tax=Halomonas Ta... [more]
A0A7Y3TVV7_9GAMM1.360e-9886.34Metal ABC transporter permease n=2 Tax=Halomonas T... [more]
A0A7X4FZN5_9GAMM2.560e-9787.98Iron chelate uptake ABC transporter family permeas... [more]
A0A455VDD7_9GAMM3.060e-9785.87Iron ABC transporter permease n=1 Tax=Halomonas ax... [more]
F7SSJ0_9GAMM1.250e-9686.41ABC-3 protein n=31 Tax=Halomonadaceae TaxID=28256 ... [more]
A0A8H9I737_9GAMM1.010e-9584.78Iron ABC transporter permease n=3 Tax=Halomonadace... [more]
H0IXK6_9GAMM3.170e-9587.15ABC-3 protein n=4 Tax=Halomonas TaxID=2745 RepID=H... [more]
A0A1R4HPQ3_9GAMM1.010e-9382.07Zinc ABC transporter, inner membrane permease prot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001626ABC transporter, TroCD-likePFAMPF00950ABC-3coord: 2..167
e-value: 1.6E-46
score: 159.0
IPR001626ABC transporter, TroCD-likePANTHERPTHR30477ABC-TRANSPORTER METAL-BINDING PROTEINcoord: 1..175
IPR037294ABC transporter, BtuC-likeGENE3D1.10.3470.10coord: 1..172
e-value: 2.2E-7
score: 32.0
IPR037294ABC transporter, BtuC-likeSUPERFAMILY81345ABC transporter involved in vitamin B12 uptake, BtuCcoord: 4..165
NoneNo IPR availablePANTHERPTHR30477:SF13HIGH-AFFINITY ZINC UPTAKE SYSTEM MEMBRANE PROTEIN ZNUBcoord: 1..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 142..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..167
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 97..116
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15519contigE-siliculosus-1a_F_contig15519:2..556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15519.3194.1mRNA_E-siliculosus-1a_F_contig15519.3194.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig15519 2..556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig15519.3194.1 ID=prot_E-siliculosus-1a_F_contig15519.3194.1|Name=mRNA_E-siliculosus-1a_F_contig15519.3194.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=185bp
FTGAFALGIVIISKIASSTHLMHILFGNVLGVQQSALLLTLVASVIALLV
VWLAYRPLLLYAFDPQQAQALGFNTSVIHYGLILLLTLTIVASLETVGII
LVVAMLITPGATAHLLTDRFKTMMLISVGVGVSSAVIGLWLSVVLNVASG
GTIVLVATSWFFIALLFSPKHGLLMRQWRRWRMG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037294ABC_BtuC-like
IPR001626ABC_TroCD