prot_E-siliculosus-1a_F_contig1536.3103.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1536.3103.1
Unique Nameprot_E-siliculosus-1a_F_contig1536.3103.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length273
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1536.3103.1 vs. uniprot
Match: D7G7F7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7F7_ECTSI)

HSP 1 Score: 544 bits (1402), Expect = 1.080e-195
Identity = 262/272 (96.32%), Postives = 267/272 (98.16%), Query Frame = 0 
Query:    1 MSEPKAPLRGRRSKLKPGMCLKAFRLECERDARGTVNVEAHEVHTVIGEDDKFSESFINPDDGFFRRDPLSYERRRICERSSFNIQPPRQRLKALETETDAQIIHVSDEPLEPKRFPPMKKTPGEGFRETNATEVIFGVDPSHGCPRPWVTPVAFRLIKEVWEQVTNAGGVFTADYDLSKSGWAMFHTIYICPAPGTAMYVQAFRVEPKTVQCCSSGWDHVDKPLFRSGGRLFNADFSPINVDVLDPVVFKPIRRLLNNPLALTTNADAAWV 272
            MSE KAPLR RRSKLKPGMCLKAFRLECERDARGTVNVEAHEVHTVIGEDDKFSES+INPDDGFFRRDPLSYERRRI ERSSFNIQPPRQRLKALETETDAQIIHVSDEPLEPKRFPP++KTPGEGFRETNATEVIFGVDPSHGCPRPWVTPVAFRLIKEVWEQVTNAGGVFTADYDLSKSGWAMFHTIYICPAPGTAMYVQAFRVEPKTVQCCSSGW+HVD+PLFRSGGRLFNADFSPINVDVLDPVVFKPIRRLLNNP ALT NADAAWV
Sbjct:    1 MSESKAPLRRRRSKLKPGMCLKAFRLECERDARGTVNVEAHEVHTVIGEDDKFSESYINPDDGFFRRDPLSYERRRIYERSSFNIQPPRQRLKALETETDAQIIHVSDEPLEPKRFPPLRKTPGEGFRETNATEVIFGVDPSHGCPRPWVTPVAFRLIKEVWEQVTNAGGVFTADYDLSKSGWAMFHTIYICPAPGTAMYVQAFRVEPKTVQCCSSGWNHVDRPLFRSGGRLFNADFSPINVDVLDPVVFKPIRRLLNNPPALTANADAAWV 272
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1536.3103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7F7_ECTSI1.080e-19596.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1536contigE-siliculosus-1a_F_contig1536:6965..8181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1536.3103.1mRNA_E-siliculosus-1a_F_contig1536.3103.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1536 6017..16766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1536.3103.1 ID=prot_E-siliculosus-1a_F_contig1536.3103.1|Name=mRNA_E-siliculosus-1a_F_contig1536.3103.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=273bp
MSEPKAPLRGRRSKLKPGMCLKAFRLECERDARGTVNVEAHEVHTVIGED
DKFSESFINPDDGFFRRDPLSYERRRICERSSFNIQPPRQRLKALETETD
AQIIHVSDEPLEPKRFPPMKKTPGEGFRETNATEVIFGVDPSHGCPRPWV
TPVAFRLIKEVWEQVTNAGGVFTADYDLSKSGWAMFHTIYICPAPGTAMY
VQAFRVEPKTVQCCSSGWDHVDKPLFRSGGRLFNADFSPINVDVLDPVVF
KPIRRLLNNPLALTTNADAAWV*
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