prot_E-siliculosus-1a_F_contig1532.3086.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1532.3086.1
Unique Nameprot_E-siliculosus-1a_F_contig1532.3086.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length500
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1532.3086.1 vs. uniprot
Match: D8LH68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH68_ECTSI)

HSP 1 Score: 619 bits (1596), Expect = 9.100e-218
Identity = 495/499 (99.20%), Postives = 496/499 (99.40%), Query Frame = 0 
Query:    1 MGDSAQAGCAMETEDAREAPLTVTEFFLDPRRYNPSSPILHKAANADGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKMLISADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYTAGKLLVTETQPDVSGSASLSMLIRSLISPISSNRAVFEHIASFIPLPRLWDTSLEKIRRRCHIDATEAIREAFRIIDEVLADLNFVHGPDHGTHLVRLWEHPSLGQRLTQDLHMPPLLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALATELVKWYRAHESSTCYIVDPDISATCANGAGSGRLDGEIEGESSDGEMDG 499
            MG+SAQAGCAMETEDAREAPLTVTEFFLDPRRYNPSSPILHKAANADGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKMLISADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYTAGKLLVTETQPDVSGSASLSMLIRSLISPISSNRAVFEHIASFIPLPRLWDTSLEKIRRRCHIDATEAIREAFRIIDEVLADLNFVHGPDHGTHLVRLWEHPSLGQRLTQDLHMPPLLVQALRSWGGTQESVTSLAGGEVTFQPRVA RVVALATELVKWYR HESSTCYIVDPDISA CANGAGSGRLDGEIEGESSDGEMDG
Sbjct:    1 MGESAQAGCAMETEDAREAPLTVTEFFLDPRRYNPSSPILHKAANADGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKMLISADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYTAGKLLVTETQPDVSGSASLSMLIRSLISPISSNRAVFEHIASFIPLPRLWDTSLEKIRRRCHIDATEAIREAFRIIDEVLADLNFVHGPDHGTHLVRLWEHPSLGQRLTQDLHMPPLLVQALRSWGGTQESVTSLAGGEVTFQPRVATRVVALATELVKWYRTHESSTCYIVDPDISAACANGAGSGRLDGEIEGESSDGEMDG 499
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BLAST of mRNA_E-siliculosus-1a_F_contig1532.3086.1 vs. uniprot
Match: A0A835YM71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM71_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.520e-28
Identity = 74/193 (38.34%), Postives = 101/193 (52.33%), Query Frame = 0 
Query:  329 RAVFEHIASFIPLPRLWDTSLEKIRRRCHIDATEAIREAFRIIDEVLADLNFVHGPDHGTHLVRLWEHPSLGQRLTQDLHMPPLLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALATELVKWYRAHESSTCYIVDPDISATCANGAGSGRLD-----------------------GEIEGESSDGEMD 498
            R +F+ I  F+PLPRLW+ SL ++RRRCHIDA EA+R A +++DEV  DL    GP+   HLV +    +L + L   L MP  L+ +LR W   Q     L  G V ++P VA +VV LATE+ KW R  E    Y +DP  ++  ++  GSG                            +E +SSDGEMD
Sbjct:  701 RGLFDRIVDFVPLPRLWEDSLGRLRRRCHIDANEAVRGALQLVDEVFTDLQIRAGPNQRGHLVAINRSEALAETLATQLGMPRNLLDSLRDWSDIQSLSVRLERG-VNYEPTVASQVVQLATEVCKWNRCREGGREYTLDPVAASILSSTGGSGXXXXXXXXXXXXXXXMPAGADHMEEAAHLESDSSDGEMD 892
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BLAST of mRNA_E-siliculosus-1a_F_contig1532.3086.1 vs. uniprot
Match: A0A7S3XR05_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR05_HETAK)

HSP 1 Score: 118 bits (295), Expect = 5.410e-27
Identity = 66/156 (42.31%), Postives = 87/156 (55.77%), Query Frame = 0 
Query:  319 RSLISPISSNRAVFEHIASFIPLPRLWDTSLEKIRRRCHIDATEAIREAFRIIDEVLADLNFVHGPDHGTHLVRLWEHPSLGQRLTQDLHMPPLLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALATELVKWYRAHESSTCYIV-DPDISA 473
            R+L   +   +A+F  +  ++PLPRLW T+L K+RRRCHID  EA+R    IIDEVL DL          HLV L   P+    L     MP LL   L  W   Q  +  +  G V F P +A++VVALA+EL +WY+ HE+ T Y   DP+ SA
Sbjct:   14 RALALALGLPKALFHRVVRYLPLPRLWATTLVKLRRRCHIDPNEAVRGGLGIIDEVLTDLRISRARAQELHLVLLARDPATQYLLRAQYRMPDLLFGWLAQWSDVQSILARVDRG-VNFTPPIAIQVVALASELHRWYKCHENYTVYSTEDPNNSA 168
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1532.3086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LH68_ECTSI9.100e-21899.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YM71_9STRA4.520e-2838.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XR05_HETAK5.410e-2742.31Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 48..63
score: 41.1
coord: 97..111
score: 36.92
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 81..110
e-value: 0.0081
score: 25.4
coord: 213..242
e-value: 9.6E-6
score: 35.1
coord: 180..209
e-value: 2.3
score: 17.2
coord: 47..77
e-value: 0.0038
score: 26.5
coord: 114..143
e-value: 0.0084
score: 25.3
coord: 147..176
e-value: 0.12
score: 21.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 47..69
score: 9.458
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 213..245
score: 13.678
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 114..146
score: 11.087
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 147..179
score: 12.289
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 81..113
score: 11.087
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 181..269
e-value: 1.7E-25
score: 91.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 109..180
e-value: 6.9E-21
score: 76.0
coord: 34..108
e-value: 1.7E-15
score: 58.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 44..267
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 185..266
e-value: 1.9E-10
score: 41.2
coord: 107..177
e-value: 1.9E-12
score: 47.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 47..266
score: 59.979
NoneNo IPR availablePANTHERPTHR24121NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATEDcoord: 45..208
coord: 92..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1532contigE-siliculosus-1a_F_contig1532:5937..13330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1532.3086.1mRNA_E-siliculosus-1a_F_contig1532.3086.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1532 5861..14275 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1532.3086.1 ID=prot_E-siliculosus-1a_F_contig1532.3086.1|Name=mRNA_E-siliculosus-1a_F_contig1532.3086.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=500bp
MGDSAQAGCAMETEDAREAPLTVTEFFLDPRRYNPSSPILHKAANADGDT
ALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKM
LISADADVNIDSNNGSTPLIQASHFGHAEVVKLLVNANALVDKANQKGTT
ALMRATQEGNEEVVGILVAAGADVSKRNNERMNALMLGSQRGHAAIVQAL
IHHKADIDGQTAQGSTALMLACKRGHEEVVRVLLTAGAELHQKDSRGRTA
RDTASKRSHESILAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYTAGKLL
VTETQPDVSGSASLSMLIRSLISPISSNRAVFEHIASFIPLPRLWDTSLE
KIRRRCHIDATEAIREAFRIIDEVLADLNFVHGPDHGTHLVRLWEHPSLG
QRLTQDLHMPPLLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALAT
ELVKWYRAHESSTCYIVDPDISATCANGAGSGRLDGEIEGESSDGEMDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt