prot_E-siliculosus-1a_F_contig1525.3041.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1525.3041.1
Unique Nameprot_E-siliculosus-1a_F_contig1525.3041.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length331
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: D8LPM7_ECTSI (RPA_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM7_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 2.780e-174
Identity = 324/330 (98.18%), Postives = 326/330 (98.79%), Query Frame = 0
Query:    1 MSSYGGFEYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQSLLSVNVKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREGISRADVSTAVQFLSSEGHLYSTIDDDHYRSTET 330
            MSSYGGFEYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQSLLSVN+KQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPI+DMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGN XXXXXXXX MYNNSNMD EGSKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREGISR DVSTAVQFLSSEGHLYSTIDDDHYRSTET
Sbjct:    1 MSSYGGFEYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQSLLSVNIKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPITDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNNXXXXXXXX-MYNNSNMDPEGSKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREGISRTDVSTAVQFLSSEGHLYSTIDDDHYRSTET 329          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: A0A835YU42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU42_9STRA)

HSP 1 Score: 184 bits (468), Expect = 7.980e-53
Identity = 107/271 (39.48%), Postives = 152/271 (56.09%), Query Frame = 0
Query:   64 QQSLLSVNVKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPLP----GKASTFGGAGVAQPMN--GVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREGISRADVSTAVQFLSSEGHLYSTIDDDHYRST 328
            +QS++ + +KQVLES+  N D   K+DG ++  ++LVGCI++++E STN  + +ED TGR+  K+F    E  +    E+R+RC+ G YV V G ++ W+D  H  A+ + P+ D +++T H LE IY HL NT GPL     G A   GGA  AQPM     GSPGF   + Q G    GN          M +N+           P+ QK+ D F       G S+   AD L  +GI   D+  AV +LSSEGH+Y+T+DD HY+ST
Sbjct:   34 KQSIMPLTIKQVLESQHDNPDDKPKVDGVEIVHVRLVGCIIDINEHSTNAVFKIEDGTGRIDAKVFIEQDE--SQLQTERRSRCREGVYVAVVGQIKRWQDKLHVHAFDIRPLEDTNQITQHFLEAIYAHLHNTLGPLRKAPGGAAGGIGGAAGAQPMAVANYGSPGF---ARQGGAAQQGNYGAFNGGGGEMDSNN---------LAPLHQKLLDIFQADTNPHGLSLDYCADVLKPQGIGYDDIRDAVVYLSSEGHIYTTVDDFHYKST 290          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: A0A7S2SSA9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSA9_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.600e-37
Identity = 87/267 (32.58%), Postives = 138/267 (51.69%), Query Frame = 0
Query:   64 QQSLLSVNVKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQKVHDQFLGADEEQGRSI--AEVADSLTREGISRADVSTAVQFLSSEGHLYSTIDDDHYRST 328
            +Q+++   ++Q+  + + + D   KIDG +++Q++LV  +++V E ST   Y VED TG ++VKM+++  E  N+  A +RA C+ G YVR+   ++ +       A  + P+ D +E+T H LE IY HL +T+GP    A+    AG     +G G+ GFN          PGN          +         G+ GFTP+Q K  +     D   G  +    +   L   G     V  AV+FL+SEGHLYST+D++HY+ T
Sbjct:   54 RQTVIPFTIRQIKGATIGHADDPVKIDGVELAQVRLVANVMQVTEQSTYVVYDVEDCTGMIQVKMWNDQDE--NEMTATRRAACRQGVYVRIHAYLKVFNGQISVTAVDIRPVEDQNEITCHMLEAIYIHLQHTQGPKQAPATA---AGWNSTSSGFGTGGFN--------PPPGNNLSSTMALEGV--------SGNSGFTPVQAKALEAVNQIDSMDGPGVHVQAIVQQLGTSGFDAGAVRAAVEFLASEGHLYSTVDEEHYKVT 299          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: A0A7S0HR69_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HR69_9EUKA)

HSP 1 Score: 145 bits (365), Expect = 4.090e-37
Identity = 92/266 (34.59%), Postives = 145/266 (54.51%), Query Frame = 0
Query:   64 QQSLLSVNVKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAA-EKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREGISRADVSTAVQFLSSEGHLYSTIDDDHYRST 328
            +QSL    +KQ+  +  +  D+G  +DG D+ Q+ +VG I   DE +TN +YTV+D T  + VKM+    + A D AA EKRA+ + G  VRV G +R++   R  VA+ + P++D +E T H +E ++THL NTKG    + +   GAG+A    GV + G  GG +  G                    +   A G+        K    +  A+ + G +I++  +++  +G++ A V TAV+ L +EGHLYSTIDD+HY++T
Sbjct:   88 KQSLAPCTIKQLKNAPASGGDNGFSVDGKDLHQVTIVGLITHADEQNTNLQYTVDDGTDSINVKMWI---DAATDEAAMEKRAQWREGAVVRVIGQMRAFNQVRSIVAFHIQPLTDFNEYTFHFIEVVHTHLRNTKGAAAEQGAPAAGAGMAGASMGV-AGGMAGGMAPQGGAG-------------FAPQAGFAANGAASTQDTVMKYFTSY--AETDIGCTISDCVNAMAPQGVTDAQVRTAVEALVNEGHLYSTIDDEHYKAT 334          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: A0A7S2B4J1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4J1_9STRA)

HSP 1 Score: 136 bits (342), Expect = 9.030e-35
Identity = 91/247 (36.84%), Postives = 128/247 (51.82%), Query Frame = 0
Query:   84 DSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPL-PGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQKVHDQFLG-ADEEQGRSIAEVADSLTREGISRADVSTAVQFLSSEGHLYSTIDDDHYRST 328
            DS  K+DG D+ Q+KLVG I+ ++E ST   Y +ED TG +  K++ + G+   D  AEKRA C+ G+YVR  G +R ++ +     Y M P++D +E+T H LE IY HL NTKG    G+              GVG           GF +P            + +    D +GS  F+ +Q +V   F      E+G SI +   SL   G     V   V+FLS+EGHLYSTIDD+H++ST
Sbjct:   11 DSNYKVDGQDIHQLKLVGNILSIEEHSTYAVYKIEDGTGVVDCKLWIDAGDSEAD--AEKRALCRQGSYVRAVGVLRDFQGNASVQLYDMRPVTDHNEITHHMLEAIYVHLQNTKGSKNAGQPXXXXXXXXXXXXXGVG-----------GFNAPA-------VNTNLNSAMASDGQGSGDFSTVQTEVLAYFTNNGSGEEGASINDAVKSLCANGHHDQAVRETVEFLSNEGHLYSTIDDEHFKST 237          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: A0A7S0DLE7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DLE7_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 1.500e-34
Identity = 92/267 (34.46%), Postives = 141/267 (52.81%), Query Frame = 0
Query:   65 QSLLSVNVKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQKVHDQF--LGADEEQGRSIAEVADSLTREGISRADVSTAVQFLSSEGHLYSTIDDDHYRSTE 329
            QS+  +  KQ  E++ A   S   IDG  ++Q+++VG I+ VD  ST + Y ++D +G+L VKM+ ND       A +    C+   YVRV G +R     R  VA+ + P+  M+E+TLH L+ I+THL NTKGPL  K +       A   N +         ++HG +              MY  S+ +A+  +G   +QQ+V   F  +G+ +EQG S+ EV   L +       +  AV FLS+EGHLYST+D+ H++ T+
Sbjct:   41 QSMTPITCKQAREAK-AIDGSSFTIDGQTIAQVRVVGLILNVDHESTQSSYGIDDGSGQLTVKMYRNDD------AEDLDQHCREDIYVRVVGTMRELAGQRIVVAFQIQPLKSMNEITLHNLDVIHTHLRNTKGPLESKKNR-----KAAANNNL--------YNEHGDS--------------MYKKSSSEAQ-VEGMDNVQQEVLQAFKSIGSAKEQGASVNEVIQRLRK--FDPVKIREAVDFLSNEGHLYSTLDETHFKCTD 270          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: L1IVT0_GUITC (Replication protein A2, 32kDa n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IVT0_GUITC)

HSP 1 Score: 134 bits (336), Expect = 2.380e-33
Identity = 92/268 (34.33%), Postives = 144/268 (53.73%), Query Frame = 0
Query:   64 QQSLLSVNVKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQKVHDQFL--GADEE-QGRSIAEVADSLTR---EGISRADVSTAVQFLSSEGHLYSTIDDDHY 325
            ++ +L V++KQV+ +   +QD   KIDG D  Q+ ++  IV+V E ST+  +++ED TG +   M+ +  E  ++     RA   VGTYVRV G VRS    R  VA+ +  ++D +E+T H  +TI+ HL+NT+GPL       G      P +   SPG    S   GFTSP               +S+  A G    T +++ VH  F+  GA  +  G SI      ++R     +SRA+VS+ ++ L+ +GH+YSTID++H+
Sbjct:   33 EKGMLPVSIKQVMNAPQDSQDEDIKIDGRDTKQVTIIAYIVDVKETSTSVTFSLEDGTGNIDAIMWIDQDE--SEFMVRSRAEWVVGTYVRVVGQVRSHNGKRSMVAFHLRTVTDFNELTYHLFDTIHAHLYNTRGPLADSKPQTG-----FPSSSFQSPGKP--SMGPGFTSPSQPGGAGAGRV----DSSRPAGGP--VTDMREAVHKAFIDFGATGDLTGLSIDNCVQQVSRVMGRSVSRAEVSSHIENLALDGHIYSTIDEEHF 285          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: A0A433QK24_9FUNG (RPA_C domain-containing protein (Fragment) n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QK24_9FUNG)

HSP 1 Score: 135 bits (340), Expect = 2.670e-33
Identity = 92/269 (34.20%), Postives = 141/269 (52.42%), Query Frame = 0
Query:   65 QSLLSVNVKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQ---KVHDQFLGADEEQGRSIAEVADSLTREGISRADVSTAVQFLSSEGHLYSTIDDDHYRSTET 330
            QSL  V VKQ++ +   + D+  KIDG D+SQ+  V  I E+ E STN  Y +ED TG++ V+ + +  +  +D  A+KR+  + G Y+RV G++  +   RH VAY + P+ D +EV+ H L+ +Y HL  TKG LP  A+       A   NG G   FNG +      S G           +Y     + E S+   P+     K+  Q    D ++G  + E+   L +      ++  A+++LS EGHL+STIDDDH + T+T
Sbjct:  108 QSLRPVTVKQLITAVQPHADADFKIDGGDISQVTFVAVIREITEQSTNVSYLMEDGTGQIDVRKWIDVDD--SDHEAQKRSEWREGAYMRVIGHLNLYNQKRHVVAYHIRPVKDHNEVSYHQLDALYVHLMFTKGLLPSLATP-----AAAASNGNGHS-FNGSAYNPHNASAG-----------IYRTGTANGESSRFPNPLYNDIIKITKQR--GDAQEGIHVQELVRQLGQ--FPPNEIRQAIEWLSGEGHLFSTIDDDHVQVTDT 353          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: F0YKH3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKH3_AURAN)

HSP 1 Score: 129 bits (323), Expect = 6.160e-32
Identity = 96/269 (35.69%), Postives = 135/269 (50.19%), Query Frame = 0
Query:   64 QQSLLSVNVKQVLES-EMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQV-GTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQKVHDQFL--GADEEQGRSIAEVADSLTREGISRADVSTAVQFLSSEGHLYSTIDDDHYRST 328
            +QSL+ + +KQVL + + A +D G  +DG +V+Q+++VG I+  D+  T   YT+ED TG L+  M+ N  E       E+RA   V G+YV V G ++ +    +  AY + PI D +E+T H LE IY+H   T       A   GG G A P +  G+           F   G                 MD  G  G T  Q KV + +   G  +E G ++  VA SL  +      V   V+FLSSEGHLYSTIDDDH++ST
Sbjct:    4 KQSLIPMTIKQVLSATKAAGEDDGFAVDGREVNQVRVVGNILRQDKKETKHVYTIEDQTGMLECTMWVNQEEAG--ATVEERAEKMVNGSYVCVIGGLKEYNGKLNVSAYDVRPIEDFNEITHHYLEAIYSHAKQTN------AIKTGGGGAAAPASAFGA-----------FNPSGGRVSADA----------MDTSGDGGMTADQTKVFNFYTTEGTGDE-GCNVNSVASSLAMD---LNQVKHIVEFLSSEGHLYSTIDDDHHKST 239          
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Match: A0A1Y1Z7U3_9FUNG (Replication protein A, subunit RPA32 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z7U3_9FUNG)

HSP 1 Score: 129 bits (325), Expect = 7.050e-32
Identity = 90/272 (33.09%), Postives = 133/272 (48.90%), Query Frame = 0
Query:   65 QSLLSVNVKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGPL------PGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNXXXXXXXXXXMYNNSNMDAEGSKGFTPIQQKVHDQFLG-ADEEQGRSIAEVADSLTREGISRADVSTAVQFLSSEGHLYSTIDDDHYRSTE 329
            Q+L  V++KQ+LE+   + D+  K+D  ++SQI  +G I    E STN  Y VED TG + V+ +  + +  N+   +KRA+   G YVRV G  + +   RH VA++M PI D +E+T H LE +Y HLF T+ P        G   +F G     P N  G  G         +  P            +Y N          F P  + +        D  +G  +  +A  L+ +   RA++S A+++L  EGHLYSTIDDDH R T+
Sbjct:   36 QNLTPVSIKQLLEATQIHADAPFKVDEHELSQITFIGIIRRQSEQSTNVSYIVEDGTGSIDVRTWLENDD--NEIQQQKRAQLVEGIYVRVVGQFKQFASKRHVVAFSMRPIEDYNEITHHFLEVVYVHLFRTRNPSVKHEGEQGYQPSFSG----DPFNPTGQYG------NQAYKQP----------EPVYGNE---------FKPSHKAIIYAIKSFPDTNEGVHVESIAQKLSSQ-FGRAEISQAIEWLVGEGHLYSTIDDDHVRCTD 275          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1525.3041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM7_ECTSI2.780e-17498.18RPA_C domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YU42_9STRA7.980e-5339.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SSA9_9STRA2.600e-3732.58Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S0HR69_9EUKA4.090e-3734.59Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
A0A7S2B4J1_9STRA9.030e-3536.84Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0DLE7_9EUKA1.500e-3434.46Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
L1IVT0_GUITC2.380e-3334.33Replication protein A2, 32kDa n=2 Tax=Guillardia t... [more]
A0A433QK24_9FUNG2.670e-3334.20RPA_C domain-containing protein (Fragment) n=2 Tax... [more]
F0YKH3_AURAN6.160e-3235.69Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A1Y1Z7U3_9FUNG7.050e-3233.09Replication protein A, subunit RPA32 n=1 Tax=Basid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 258..330
e-value: 1.4E-21
score: 78.1
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 98..185
e-value: 3.1E-6
score: 27.1
NoneNo IPR availableGENE3D2.40.50.140coord: 59..198
e-value: 6.5E-39
score: 134.6
IPR014892Replication protein A, C-terminalPFAMPF08784RPA_Ccoord: 233..323
e-value: 8.1E-12
score: 45.7
IPR040260Replication factor A protein-likePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 26..328
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 262..329
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 68..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1525contigE-siliculosus-1a_F_contig1525:15698..23111 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1525.3041.1mRNA_E-siliculosus-1a_F_contig1525.3041.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1525 14802..23111 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1525.3041.1 ID=prot_E-siliculosus-1a_F_contig1525.3041.1|Name=mRNA_E-siliculosus-1a_F_contig1525.3041.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=331bp
MSSYGGFEYGGGGGGFDGGGGGGGGGFGSPGGGGGGFMGGGGTDSPAGGG
GGGSGGGGQKNKEQQSLLSVNVKQVLESEMANQDSGAKIDGADVSQIKLV
GCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVG
TYVRVFGNVRSWKDDRHSVAYTMTPISDMDEVTLHALETIYTHLFNTKGP
LPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNNNNNNNNNNNM
YNNSNMDAEGSKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREGISR
ADVSTAVQFLSSEGHLYSTIDDDHYRSTET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR036390WH_DNA-bd_sf
IPR040260RFA2-like
IPR014892RPA_C
IPR004365NA-bd_OB_tRNA
IPR036388WH-like_DNA-bd_sf