prot_E-siliculosus-1a_F_contig1520.3017.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1520.3017.1
Unique Nameprot_E-siliculosus-1a_F_contig1520.3017.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length709
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1520.3017.1 vs. uniprot
Match: A0A6H5KXR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR1_9PHAE)

HSP 1 Score: 644 bits (1661), Expect = 4.110e-217
Identity = 430/563 (76.38%), Postives = 441/563 (78.33%), Query Frame = 0 
Query:    1 MSSSALGVKSNSYLRRAGHYH-QRNMSAVKVVPAKESDASGSGLEGDSEQDSPVGLQVGSGDVELALGQPSLKPSLESTSPAPDTIEEFKTQGGDSTVHRDARPTATMTPTRARAGPVVNFTPGRPPSFHFKQLFGQAESNDEKESSGVFPTLAARSTPPPRPVHSPPSVALAYASPYSSRXXXXXXXXXXXXXXXSAALQADERGAATPTSSAGYSTXXXXXXXXXXXXTVASIAANFRSASGGGAPLGTPTSSKQAAARFSPSSAXXXXXXAGESAMVSAISASLGAPGKQGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADQPRGVETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGQSLPPATGAGVGEEGRPQXXXXX--------VLPPVPPFDPTADDAPSLASPQARRSVSLKAASGLGVAGTHEGESARAATVSAXXXXXXXXXXQRAEDLEVVSVAMSDRGGGERKRRGAFAKALSSSMSAGDFLGRFRTKKSSATPAVSRGVNGNAADAAASGNRRSSRPIFRDRVSTKRRLSA 554
            MSSSAL VKSNSYLRRAGHYH QRNMS VKVVP KESDASGSG+EGDSEQDSPVGLQVGSGDVELALG PSLKPSLESTSPAPDTIEEFKTQGGDSTVHRDARPTATMTPTRARAGPVVNFTPGRPPSFHFKQLFGQAESNDEKESSGVFPTLAARSTPPPRPVHSPPSVALAY SPYSSR               SAALQADERGAATP SSAGYST            TVASIAA+FRSA GGGAPLGTPTSS+QAAARFSP   XXXXX AGE ++VSAISA L APG+QGN                                   S+DQPRGVET       XXXXXXXXXXXXXXXXX            KGQ LPP T  G+GEE RP XXXXX        VL PVPPFDPT DDAPS +SPQARRSVSLKAASG  VAGTHEGES RAATVSA XXXXXXXXXQRAE +EVVSVAMSDRG G+RKRRG FAKALSSSMSAGDFLGRFRTKKSSATPAVSRGVNGNA DAAASGNRRSSRPIFRDR STKRRLSA
Sbjct:    1 MSSSALCVKSNSYLRRAGHYHHQRNMSVVKVVPGKESDASGSGVEGDSEQDSPVGLQVGSGDVELALGHPSLKPSLESTSPAPDTIEEFKTQGGDSTVHRDARPTATMTPTRARAGPVVNFTPGRPPSFHFKQLFGQAESNDEKESSGVFPTLAARSTPPPRPVHSPPSVALAYTSPYSSRRGSRERRRIASQESLSAALQADERGAATPRSSAGYSTGKFTDLGMAPASTVASIAASFRSAPGGGAPLGTPTSSQQAAARFSPXXXXXXXXPAGEPSVVSAISAVLDAPGEQGNGGGDGGSGFQVVANGGVTRSAAARSSPLSTADP--SSDQPRGVETAAAVTPAXXXXXXXXXXXXXXXXXTPSAQQATAA--KGQPLPPVTDVGIGEEERPXXXXXXXXXXXXXRVLSPVPPFDPTVDDAPSPSSPQARRSVSLKAASG--VAGTHEGESDRAATVSATXXXXXXXXXQRAEGVEVVSVAMSDRGAGQRKRRGTFAKALSSSMSAGDFLGRFRTKKSSATPAVSRGVNGNATDAAASGNRRSSRPIFRDRASTKRRLSA 557
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BLAST of mRNA_E-siliculosus-1a_F_contig1520.3017.1 vs. uniprot
Match: D8LQJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ1_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.120e-12
Identity = 44/48 (91.67%), Postives = 44/48 (91.67%), Query Frame = 0 
Query:  476 MSDRGGGERKRRGAFAKALSSSMSAGDFLGRFRTKKSSATPAVSRGVN 523
            MSDRG GERKRRG FAKALSSSMSAGDFLGRFRTKKSSATPAVS  VN
Sbjct:    1 MSDRGAGERKRRGTFAKALSSSMSAGDFLGRFRTKKSSATPAVSPDVN 48
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1520.3017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXR1_9PHAE4.110e-21776.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQJ1_ECTSI1.120e-1291.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 672..697

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1520contigE-siliculosus-1a_F_contig1520:559..4006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1520.3017.1mRNA_E-siliculosus-1a_F_contig1520.3017.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1520 559..4221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1520.3017.1 ID=prot_E-siliculosus-1a_F_contig1520.3017.1|Name=mRNA_E-siliculosus-1a_F_contig1520.3017.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=709bp
MSSSALGVKSNSYLRRAGHYHQRNMSAVKVVPAKESDASGSGLEGDSEQD
SPVGLQVGSGDVELALGQPSLKPSLESTSPAPDTIEEFKTQGGDSTVHRD
ARPTATMTPTRARAGPVVNFTPGRPPSFHFKQLFGQAESNDEKESSGVFP
TLAARSTPPPRPVHSPPSVALAYASPYSSRRASRERKRTASQESLSAALQ
ADERGAATPTSSAGYSTGKFTDPGTAPASTVASIAANFRSASGGGAPLGT
PTSSKQAAARFSPSSAAARPPPAGESAMVSAISASLGAPGKQGNGGGGSG
GGGGVSVVAKGGVTLSAAARSSPSSAADPSADQPRGVETAAAVTAAGGAD
QQQQREEGTTTTMTPSDQQQQAAAAKGQSLPPATGAGVGEEGRPQQQQQQ
VLPPVPPFDPTADDAPSLASPQARRSVSLKAASGLGVAGTHEGESARAAT
VSATTTTAAAAAAQRAEDLEVVSVAMSDRGGGERKRRGAFAKALSSSMSA
GDFLGRFRTKKSSATPAVSRGVNGNAADAAASGNRRSSRPIFRDRVSTKR
RLSAPPRAAAAAAAAGASTKQAADIKQQQQQQQQPKEKEDGAAVSSKRTA
SAPPAGSVATSGDEGGGVAVAATTRAAGPGGAEETKSEEPAEPVADTARA
APEEAVEDGAVELKEETKKDEVKEDEEDKTGEEKEEKKAEEEEEEEEEPE
AVVALTMSV
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