prot_E-siliculosus-1a_F_contig1517.3001.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1517.3001.1
Unique Name	prot_E-siliculosus-1a_F_contig1517.3001.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	998

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1517.3001.1 vs. uniprot
Match: A0A6H5KUR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR1_9PHAE)

HSP 1 Score: 704 bits (1818), Expect = 1.190e-242
Identity = 419/507 (82.64%), Postives = 429/507 (84.62%), Query Frame = 0

Query:   67 RTKSDNASKLQELKLAFGLLSKEIQGLDGEEEDQCLPYPPATESSAAVTEGEMRRNEASKPLTPAVKNTDIPPSAVATEEAPQQSHGGLAAAANFPAKKAATSHPGVQQRRNEAANGLNRMXXXXXXXXXXXXXXXVRASSHTEGRKAAEAAAKQAKQSLKQLDLELEKERRARTAVESALHQLQLRATESDLEREKLERVLASFGGRSLEEITTASQLLERRLREAEMALVDSQQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRGXXXXXXXXXXXXXXXXXXXXXXXXXAQRLEVLRTANKRLDKRVAAVALQSSVGTRARSNAGGGGGATDDSVARLAAARARLKVLSTSGAAVSLNNTGKGRGQSHAGEERAAVERAVGTVVAEKQWRDKLRNAEMQGEVFQSAAKASATGMKIALRQKAELEEMNRVLVKQLAGDIPAEERELVGRMADDEDVIRSPAPLVVGTDGESTCRDLGKDETTATL 573
            RTKS+NASKLQELKLAFGLLS+EIQGLDGEE DQCLP  PATESSAAV EG++RRNEA KPL P V +T IPPSAVATEEAPQQSH GLAA AN PAKKAATSHPGVQ+RRNEAA+ LNRM               VRASSH EG KAAEAAAKQAKQSLKQLDLELEKERRAR A ESALHQLQLRATESD    KLERVLASFGGRSLEEITTASQLLE RLREAE ALVDSQQLTA KAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRG                         AQRLEVLRTANKRLDKRVAAV LQSSVGTRAR NAGGGG ATDDSVARLAAARARLKVLSTSGAAVS   T KGRGQ HAGEERAAVERAVGTVVAEKQWRDKLRNAEMQG+VFQSAAKASATGMK+ALRQKAELEEMNRVLVKQLA D+PAEERELVGRM DDEDVIRSPAPL VGTDGEST   LGKDETTATL
Sbjct:    8 RTKSENASKLQELKLAFGLLSREIQGLDGEEGDQCLPCSPATESSAAVAEGDIRRNEAPKPLAPTVNSTHIPPSAVATEEAPQQSHSGLAAEANLPAKKAATSHPGVQERRNEAADDLNRMEADQRNKAAADGFDRVRASSHAEGSKAAEAAAKQAKQSLKQLDLELEKERRARIAAESALHQLQLRATESDXXXXKLERVLASFGGRSLEEITTASQLLEHRLREAETALVDSQQLTAVKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRGRANAEQQTRTATAALKKSEAQRESLAQRLEVLRTANKRLDKRVAAVTLQSSVGTRARCNAGGGGDATDDSVARLAAARARLKVLSTSGAAVSSITTEKGRGQWHAGEERAAVERAVGTVVAEKQWRDKLRNAEMQGKVFQSAAKASATGMKMALRQKAELEEMNRVLVKQLADDMPAEERELVGRMVDDEDVIRSPAPLDVGTDGESTYEYLGKDETTATL 514

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BLAST of mRNA_E-siliculosus-1a_F_contig1517.3001.1 vs. uniprot
Match: D7FPG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG8_ECTSI)

HSP 1 Score: 553 bits (1426), Expect = 9.950e-185
Identity = 361/464 (77.80%), Postives = 371/464 (79.96%), Query Frame = 0

Query:  119 MRRNEASKPLTPAVKNTDIPPSAVATEEAPQQSHGGLAAAANFPAKKAATSHPGVQQRRNEAANGLNRMXXXXXXXXXXXXXXXVRASSHTEGRKAAEAAAKQAKQSLKQLDLELEKERRARTAVESALHQLQLRATESDLEREKLERVLASFGGRSLEEITTASQLLERRLREAEMALVDSQQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRGXXXXXXXXXXXXXXXXXXXXXXXXXAQRLEVLRTANKRLDKRVAAVALQSSVGTRARSNAGGGGGATDDSVARLAAARARLKVLSTSGAAVSLNNTGKGRG-QSHAGEERAAVERAVGTVVAEKQWRDKLRNAEMQGEVFQSAAKASATGMKIALRQKAELEEMNRVLVKQLAGDIPAEERELVGRMADDEDVIRSPA-PLVVGTDG-------ESTCRDLGKDETTATL 573
            MRRNEASKPLTPAVKNT IPPSAVATEEAPQQSHGGLAAAAN PAKKAATSHPGVQQR NEAA+ LNRM  XXXXXXXXXXXXXVRASSH EGRKAAEAAAKQAKQSLKQLDLEL+KERRARTA ES LHQLQLRATESDLEREKLERVLASFGGRSL+EITTASQLLERRL+EAE ALV+SQQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRG                         AQRLEVLRTANKRLDKRVAAVALQSSVG RARSN           VARLA                           QSHAGEERAAVERAVGTV AEKQWRDKLRNAEMQGEVFQSAAKASATGMKIAL+QKAELEEMNRVLVKQLAGD+PAEEREL+GRMADDEDVIRSPA PLVVGTD        E+  R+   D    TL
Sbjct:    1 MRRNEASKPLTPAVKNTGIPPSAVATEEAPQQSHGGLAAAANLPAKKAATSHPGVQQRSNEAADDLNRMGAXXXXXXXXXXXXXVRASSHAEGRKAAEAAAKQAKQSLKQLDLELDKERRARTAAESTLHQLQLRATESDLEREKLERVLASFGGRSLQEITTASQLLERRLKEAETALVNSQQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRGRANAEQQARAATAALKKSEAQRESLAQRLEVLRTANKRLDKRVAAVALQSSVGARARSNXXXXXXXXXXXVARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXQSHAGEERAAVERAVGTVAAEKQWRDKLRNAEMQGEVFQSAAKASATGMKIALKQKAELEEMNRVLVKQLAGDMPAEERELIGRMADDEDVIRSPAAPLVVGTDADGALQSVEARRRERNNDAAVTTL 464

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1517.3001.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1517.3001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KUR1_9PHAE	1.190e-242	82.64	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FPG8_ECTSI	9.950e-185	77.80	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 212..267
None	No IPR available	COILS	Coil	Coil	coord: 308..328
None	No IPR available	COILS	Coil	Coil	coord: 353..394
None	No IPR available	COILS	Coil	Coil	coord: 276..303
None	No IPR available	COILS	Coil	Coil	coord: 502..522

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1517	contig	E-siliculosus-1a_F_contig1517:26702..30352 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1517.3001.1	mRNA_E-siliculosus-1a_F_contig1517.3001.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1517 26702..30352 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1517.3001.1 ID=prot_E-siliculosus-1a_F_contig1517.3001.1|Name=mRNA_E-siliculosus-1a_F_contig1517.3001.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=998bp
MSSRCGQPVVSSSSQRGCFHLEASAAPQQQWRPKPRKIPCPNRPSLSRKA
TTTTATAGSGEALNRRRTKSDNASKLQELKLAFGLLSKEIQGLDGEEEDQ
CLPYPPATESSAAVTEGEMRRNEASKPLTPAVKNTDIPPSAVATEEAPQQ
SHGGLAAAANFPAKKAATSHPGVQQRRNEAANGLNRMGVDQRNKAATDGL
DRVRASSHTEGRKAAEAAAKQAKQSLKQLDLELEKERRARTAVESALHQL
QLRATESDLEREKLERVLASFGGRSLEEITTASQLLERRLREAEMALVDS
QQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCL
RGRANAEQQARAATAALRKCEAQRESLAQRLEVLRTANKRLDKRVAAVAL
QSSVGTRARSNAGGGGGATDDSVARLAAARARLKVLSTSGAAVSLNNTGK
GRGQSHAGEERAAVERAVGTVVAEKQWRDKLRNAEMQGEVFQSAAKASAT
GMKIALRQKAELEEMNRVLVKQLAGDIPAEERELVGRMADDEDVIRSPAP
LVVGTDGESTCRDLGKDETTATLVPSVVGSRIKSERQHHASATQCSSAVS
YPAVDRSSGLPARDGAAGGTATAATPTPLGASDNTPDMGGNDNIIPDDLV
VQQLTEPCNRSRQEGGRKTTMPPSPSCVIPQKLRPAAVRSYSVDARRSGK
TRTTSPWRHDGCPSRPRSASASASTTNPSPCTTTPTRVRCEPQQQRHHHQ
QEDGMVVARNNDACCCSSSAAPFNQLLLESKKLRDEVLSAVRNGPLGCEE
TRCKACSGGNGSGNGSGDVGVGVGGAGGGDAGGGSGGRGGGGDGDGGYSG
SQLEKVGGDPAVASVPIEVLLRLCDRGARKAWRKREGGVADCAVGGEKLI
TGGVVADQDLDREGMADESSDRQNLTESPAEGSKITLDDDATHLTSPLPP
GITRALAQQVQGAVARGDERAFLNIVGRCGSTAREGIAKLLVIDFPK*