prot_E-siliculosus-1a_F_contig15.2901.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig15.2901.1
Unique Nameprot_E-siliculosus-1a_F_contig15.2901.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length548
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15.2901.1 vs. uniprot
Match: D7G0Q5_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q5_ECTSI)

HSP 1 Score: 938 bits (2424), Expect = 0.000e+0
Identity = 480/522 (91.95%), Postives = 495/522 (94.83%), Query Frame = 0
Query:   27 MAGDVTELFDVLAGKLRPGHKNSGGGEGQVGTSLSRTSVLNAQYRGSSDNTVLGMANLKRIQNFLDEPQKHLGQVIADIEKEAGSFYGQVSSRRQGSEAGTQRMQRGAPQSPGATSAQAISLEDVPEMNKYLGPSSRFGDGDGSFWDRWLTTTGHFTEQGSYAKADMPTRSMYSTGVVPPHSGFKRYQLDKLAFTKHPEPRVLTYAARWELGDSIKSDEAPKRLRGACSESTLGPDRRNWLDEVVLAKAAEEFKSETNKKLAQQQSAQRSSNEHEIPTPGDEFS-TASRSQDVSIRSEGTKRPVVGFRSIGAVGNDEGPGDRFADGDTDNEKRSGPGDESRLISRDTSLEDAVAKFGLVHPNYFGRQARTHVYNYYKQVSRRRHQYGDLQAMSMIPLTPLDHMGALPAYQAGLDAINIEDMERALHEKAARSNIDGNSANQEKTTRHQLPPLATTAAAGWQSESGDKGSGVDEGDEHERKMAKALENDDRQITSRTKYLVRCMERNVAPRAHVIIRKTHTTK 547
            MAGDVTELFDVLAGKLRPGHKNSGGGEG+VGTSLSRTS+LNAQYRGSSDNTVLGMANLKRIQNFLDEPQKHLGQVIADIEKEAGSFY QVSSR+QGS AG QRMQRGAPQSPGAT AQAISLEDVPEMNKYLGPSSRFGDGDGSFWDRWLTTTGHFTEQGSYA ADMPTRSMYSTGVVPPHSGFKRYQLDKLAFTKHPEPRVLTYAARWELGDSIKSDEAPKRLRG  SESTLGPDRRNWLDEVVLAKAAEEFKS+TN KLA+QQSA RSS+EHEIPTPGDE+S T SRSQDV IR EGTKRPVVG  SIGA G DE  GDR ADGDTDNEKRSGPGDESRLI+RDT LEDAVAKFGLVHPNYFGR+ARTHVYNYYKQVSRRRHQYGDLQAMSMIPLTPLDHMGALPAYQAGLDAINIED E+ALHEKAAR+NID +SA  E TT H+LPPLATTAAAGWQSESGDKGSGVDEGDEHERKM+KALEN+DRQITSRTKYLVRCMERNVAPRAHVIIRKTHTTK
Sbjct:    1 MAGDVTELFDVLAGKLRPGHKNSGGGEGRVGTSLSRTSILNAQYRGSSDNTVLGMANLKRIQNFLDEPQKHLGQVIADIEKEAGSFYDQVSSRQQGSGAGKQRMQRGAPQSPGATPAQAISLEDVPEMNKYLGPSSRFGDGDGSFWDRWLTTTGHFTEQGSYATADMPTRSMYSTGVVPPHSGFKRYQLDKLAFTKHPEPRVLTYAARWELGDSIKSDEAPKRLRGGYSESTLGPDRRNWLDEVVLAKAAEEFKSQTNNKLARQQSAHRSSDEHEIPTPGDEYSSTTSRSQDVGIRLEGTKRPVVGLTSIGAAGKDEDQGDRSADGDTDNEKRSGPGDESRLITRDTCLEDAVAKFGLVHPNYFGRRARTHVYNYYKQVSRRRHQYGDLQAMSMIPLTPLDHMGALPAYQAGLDAINIEDTEQALHEKAARTNIDIDSAKPETTTPHKLPPLATTAAAGWQSESGDKGSGVDEGDEHERKMSKALENNDRQITSRTKYLVRCMERNVAPRAHVIIRKTHTTK 522          
BLAST of mRNA_E-siliculosus-1a_F_contig15.2901.1 vs. uniprot
Match: A0A6H5J7F9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F9_9PHAE)

HSP 1 Score: 851 bits (2198), Expect = 1.010e-308
Identity = 442/497 (88.93%), Postives = 457/497 (91.95%), Query Frame = 0
Query:   27 MAGDVTELFDVLAGKLRPGHKNSGGGEGQVGTSLSRTSVLNAQYRGSSDNTVLGMANLKRIQNFLDEPQKHLGQVIADIEKEAGSFYGQVSSRRQGSEAGTQRMQRGAPQSPGATSAQAISLEDVPEMNKYLGPSSRFGDGDGSFWDRWLTTTGHFTEQGSYAKADMPTRSMYSTGVVPPHSGFKRYQLDKLAFTKHPEPRVLTYAARWELGDSIKSDEAPKRLRGACSESTLGPDRRNWLDEVVLAKAAEEFKSETNKKLAQQQSAQRSSNEHEIPTPGDEFS-TASRSQDVSIRSEGTKRPVVGFRSIGAVGNDEGPGDRFADGDTDNEKRSGPGDESRLISRDTSLEDAVAKFGLVHPNYFGRQARTHVYNYYKQVSRRRHQYGDLQAMSMIPLTPLDHMGALPAYQAGLDAINIEDMERALHEKAARSNIDGNSANQEKTTRHQLPPLATTAAAGWQSESGDKGSGVDEGDEHERKMAKALENDDRQITSRTK 522
            MAGDVTELFDVLAGKLRPGHKNSGGGEGQVG+SLSRTS+LNAQYRGSSDNTVLGMANLKRIQNFLDEPQKHLGQVIADIEKEAGSFYGQVSSRRQGS AG QRMQRGAPQSPGAT AQAISLEDVPEMNKYLGPSSRFGDGDGSFWDRWLTTTGHFTEQGSYAKADMPTRSMYSTGVVPPHSGFKRYQLDKLAFTKHPEPRVLTYAAR ELG SIKSDEAPKRLRGA SESTLGPDRRNWLDEVVLAKAAE+FKSETNKKL +QQSAQRSS+EHE PT GDE S T SRSQDV IRSEGTKRPVVG RSIGA   DEGPG+R+               ESRLISRDTSLEDAVAKFGLV+PNYFG++AR+HVYNYYKQVSRRRHQYGDLQAMSMIPLTPLDHMGALPAYQAGLDAIN EDME+ALHEKAAR NI GNS   EKTTRHQLPPLATTAAAGWQSESGD+GSGVDEGDEHERKMAKALENDDRQ+ +R K
Sbjct:    1 MAGDVTELFDVLAGKLRPGHKNSGGGEGQVGSSLSRTSILNAQYRGSSDNTVLGMANLKRIQNFLDEPQKHLGQVIADIEKEAGSFYGQVSSRRQGSGAGKQRMQRGAPQSPGATPAQAISLEDVPEMNKYLGPSSRFGDGDGSFWDRWLTTTGHFTEQGSYAKADMPTRSMYSTGVVPPHSGFKRYQLDKLAFTKHPEPRVLTYAARRELGVSIKSDEAPKRLRGAYSESTLGPDRRNWLDEVVLAKAAEDFKSETNKKLERQQSAQRSSDEHERPTSGDEHSSTTSRSQDVGIRSEGTKRPVVGLRSIGAAAKDEGPGNRW---------------ESRLISRDTSLEDAVAKFGLVNPNYFGQRARSHVYNYYKQVSRRRHQYGDLQAMSMIPLTPLDHMGALPAYQAGLDAINTEDMEQALHEKAARINIYGNSVKSEKTTRHQLPPLATTAAAGWQSESGDRGSGVDEGDEHERKMAKALENDDRQVRNRWK 482          
BLAST of mRNA_E-siliculosus-1a_F_contig15.2901.1 vs. uniprot
Match: A0A8J2S9W4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9W4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.070e-8
Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 0
Query:   73 SSDNTVLGMANLKRIQNFLDEPQKHLGQVIADIEK--EAGSFYGQVSSRRQGSEAGTQRMQRGAPQSPGATSAQAISLEDVPEMNKYLGPSSRFGDGDGSFWDRWLTTTGHFTEQGSYAKADMPTRSMYSTGVVPPHSGFK 211
            S D  +L   N++RIQ FL++P + +G+ +  +E+  +A +       +R+   +   R ++             +  +      + +GP +RFGDGDG FWDRWLT  G  +  G YA   MPT  + + G V P SGFK
Sbjct:   21 SEDLDLLADFNVERIQQFLNKPFERVGEALEKVEERLKAQNITLVDDLKRENDRSPRPRREQ-------------VKRDPTLSSTRKMGPRARFGDGDGGFWDRWLTDAGCASGSGDYA---MPTNDV-AAGYVAPKSGFK 144          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15.2901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0Q5_ECTSI0.000e+091.95Hypothetical leucine rich repeat calcium binding p... [more]
A0A6H5J7F9_9PHAE1.010e-30888.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2S9W4_9STRA1.070e-831.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig15contigE-siliculosus-1a_F_contig15:59381..65169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig15.2901.1mRNA_E-siliculosus-1a_F_contig15.2901.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig15 59381..65169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig15.2901.1 ID=prot_E-siliculosus-1a_F_contig15.2901.1|Name=mRNA_E-siliculosus-1a_F_contig15.2901.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=548bp
MGDVRSMQRKSQEAHADDQAFAHARNMAGDVTELFDVLAGKLRPGHKNSG
GGEGQVGTSLSRTSVLNAQYRGSSDNTVLGMANLKRIQNFLDEPQKHLGQ
VIADIEKEAGSFYGQVSSRRQGSEAGTQRMQRGAPQSPGATSAQAISLED
VPEMNKYLGPSSRFGDGDGSFWDRWLTTTGHFTEQGSYAKADMPTRSMYS
TGVVPPHSGFKRYQLDKLAFTKHPEPRVLTYAARWELGDSIKSDEAPKRL
RGACSESTLGPDRRNWLDEVVLAKAAEEFKSETNKKLAQQQSAQRSSNEH
EIPTPGDEFSTASRSQDVSIRSEGTKRPVVGFRSIGAVGNDEGPGDRFAD
GDTDNEKRSGPGDESRLISRDTSLEDAVAKFGLVHPNYFGRQARTHVYNY
YKQVSRRRHQYGDLQAMSMIPLTPLDHMGALPAYQAGLDAINIEDMERAL
HEKAARSNIDGNSANQEKTTRHQLPPLATTAAAGWQSESGDKGSGVDEGD
EHERKMAKALENDDRQITSRTKYLVRCMERNVAPRAHVIIRKTHTTKA
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