prot_E-siliculosus-1a_F_contig1499.2892.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1499.2892.1
Unique Nameprot_E-siliculosus-1a_F_contig1499.2892.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length710
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1499.2892.1 vs. uniprot
Match: A0A6H5KHJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ1_9PHAE)

HSP 1 Score: 1048 bits (2711), Expect = 0.000e+0
Identity = 601/707 (85.01%), Postives = 625/707 (88.40%), Query Frame = 0
Query:    3 MAPSASKIAWTFTFAICSRSGDSFHFQSPCSSSRWPGVGKGSHSYPAAPHNDRCCSRPPAQAAAKITAVLAARHQGGVRDPGDETGDSYGDLPGQTAADKAGTTEADAEVAEALRRQVFANEKGFEASSVFNPTRAREEREEEEARALAAQWGSTPERAKEIVKKTKEDKDLGFQELQRITEELNMSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDSHGLPVADERDPIMQAARETTKANQRAAEKSGVKGITFPSLPDCPRCSMPTAEDELSRFEMCSQCKAQEISSKAYAGPQMASKYTYDNGDAPFSSSWTSPVPPKTNGGASTESGKAAEVXXXXXXXXXXXXXXXXXXXXXXXXXXAVPIDTRRAGAPPSWAAGDNDNDRGESPTGAAAGPLRKGNGNLRSTAGNDSHRNLGNSSPDTVTPPSVTATGSTVATASSRGDGTPGAFPRAAATAAAPAENTAVDTKRSSNAKVGRGSDMFSRAPGPLAARASKGGPVSRDRPRGGGGDGGASSGEMKGNDRAEVAVRKLSLEVAELRTLLGINRSALARVETMNKSAIAPQPTAEGRGAASNNEEQRRDTAVRKLARDVAELRTQLSTVVDKVSDSAVTPPSGRGGDSEVVQTMKREMAELRSQLDNARKETALTRSALRRLQGEVDVLQKKSAGRR 709
            MAPSA KIAWTFTFAI SRSGDSF+FQSPCSSSRWP     SHSYPAAPHN+RCCSR PAQAAAKITAVLAARHQGGV D GDE  +S+GDLPG+TAAD      ADAE AEALRRQVFANEKGFEASSVFNPTRAREEREEEEARALAAQWGSTPERAKEIV KT +DKDL FQELQRITEELNMSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDS+GLPVADERDP++QAARETTKANQRAAEKSGV+GITFPSLPDCPRCSMPT EDELSRF+MCSQCKAQ+ISSKAYAGPQMASKYTYDNGDAPFSSSWTSP PP TNGGASTESGK AEV        XXXXXXXXXXXXXXXXXX+ PID RRA  PPSW +GDNDNDRGE+PTGAA GPLRKGNGNLRST G+ SHRNLGNS+PD +TPPS TATGSTVA AS R  GTPGA PR  A AAAPAENTAVD+KRSSN KVG GSD+ S APGP AARASKGG VSRDRPRGGG DG  S G+ KGN RAEVAVRKLSLEVAELRTLLGINRS LARVETM+KSA APQ T EGRG ASNNE QRRDTAV+KLARDVAELR QLSTVVDKVSDS+VTPP GRGGDSEVVQTM          LDNARKETALTRSALRRLQGEVDVLQKKSAGRR
Sbjct:    1 MAPSAPKIAWTFTFAIGSRSGDSFNFQSPCSSSRWPSR-TASHSYPAAPHNNRCCSRQPAQAAAKITAVLAARHQGGVGDAGDENRNSHGDLPGRTAADT-----ADAEAAEALRRQVFANEKGFEASSVFNPTRAREEREEEEARALAAQWGSTPERAKEIVSKTIDDKDLSFQELQRITEELNMSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDSYGLPVADERDPVIQAARETTKANQRAAEKSGVEGITFPSLPDCPRCSMPTTEDELSRFDMCSQCKAQDISSKAYAGPQMASKYTYDNGDAPFSSSWTSPGPPSTNGGASTESGKTAEVLPQKLSEEXXXXXXXXXXXXXXXXXXSAPIDPRRADPPPSWPSGDNDNDRGEAPTGAA-GPLRKGNGNLRSTTGSRSHRNLGNSAPDAITPPSATATGSTVAAASVRRHGTPGALPRPTAAAAAPAENTAVDSKRSSNTKVGGGSDIISPAPGPFAARASKGGAVSRDRPRGGGSDGDVSLGDTKGNGRAEVAVRKLSLEVAELRTLLGINRSTLARVETMSKSATAPQTTTEGRGTASNNEVQRRDTAVQKLARDVAELRAQLSTVVDKVSDSSVTPPRGRGGDSEVVQTMXXXXXXXXXXLDNARKETALTRSALRRLQGEVDVLQKKSAGRR 700          
BLAST of mRNA_E-siliculosus-1a_F_contig1499.2892.1 vs. uniprot
Match: D7FVK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK9_ECTSI)

HSP 1 Score: 815 bits (2104), Expect = 3.430e-291
Identity = 474/522 (90.80%), Postives = 486/522 (93.10%), Query Frame = 0
Query:  188 MSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDSHGLPVADERDPIMQAARETTKANQRAAEKSGVKGITFPSLPDCPRCSMPTAEDELSRFEMCSQCKAQEISSKAYAGPQMASKYTYDNGDAPFSSSWTSPVPPKTNGGASTESGKAAEVXXXXXXXXXXXXXXXXXXXXXXXXXXAVPIDTRRAGAPPSWAAGDNDNDRGESPTGAAAGPLRKGNGNLRSTAGNDSHRNLGNSSPDTVTPPSVTATGSTVATASSRGDGTPGAFPRAAATAAAPAENTAVDTKRSSNAKVGRGSDMFSRAPGPLAARASKGGPVSRDRPRGGGGDGGASSGEMKGNDRAEVAVRKLSLEVAELRTLLGINRSALARVETMNKSAIAPQPTAEGRGAASNNEEQRRDTAVRKLARDVAELRTQLSTVVDKVSDSAVTPPSGRGGDSEVVQTMKREMAELRSQLDNARKETALTRSALRRLQGEVDVLQKKSAGRR 709
            MSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDSHGLPVADERDPI+QAARETTKANQRAAEKSGV+ ITFPSLPDCPRCSMPT EDELSRFEMCSQCKAQEI+SKAYAGPQMASKYTYDNGDAPFSSSWTSPVPPKTNG            XXXXXXXXXXXXXXXXXXXXXXXXXXA PIDTRRAGAP +W+ GDNDNDRGESPTGA+AGPLRKGNGNLRST G+ SHRNLGNS+PDTV+PPS TATGSTVA AS RGDG PGAFPRAAATAAAPA+NT VDTKRSSNAKVG GSD FSRAPGP AARASKGG VSRDRPRGGG DGG SSGE KGNDRAEVAVRKLSLEVAELRTLLGINRSALARVETM+KSA APQPT EGRGAASNNE+QRRDTAVRKLARDVAELR QLSTVVDKVSDSAVTPPSGRGGDSEVVQTMKREMAELRSQLDNARKET LTRSALRRLQGEVDVLQKK AGRR
Sbjct:    1 MSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDSHGLPVADERDPIIQAARETTKANQRAAEKSGVEAITFPSLPDCPRCSMPTTEDELSRFEMCSQCKAQEITSKAYAGPQMASKYTYDNGDAPFSSSWTSPVPPKTNGXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPIDTRRAGAPSTWSYGDNDNDRGESPTGASAGPLRKGNGNLRSTTGSGSHRNLGNSAPDTVSPPSATATGSTVAAASFRGDGVPGAFPRAAATAAAPADNTVVDTKRSSNAKVGGGSDNFSRAPGPFAARASKGGAVSRDRPRGGGSDGGVSSGETKGNDRAEVAVRKLSLEVAELRTLLGINRSALARVETMSKSAKAPQPTTEGRGAASNNEDQRRDTAVRKLARDVAELRAQLSTVVDKVSDSAVTPPSGRGGDSEVVQTMKREMAELRSQLDNARKETTLTRSALRRLQGEVDVLQKKFAGRR 521          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1499.2892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHJ1_9PHAE0.000e+085.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK9_ECTSI3.430e-29190.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 561..581
NoneNo IPR availableCOILSCoilCoilcoord: 663..697
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..709

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1499contigE-siliculosus-1a_F_contig1499:6815..14823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1499.2892.1mRNA_E-siliculosus-1a_F_contig1499.2892.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1499 6151..14860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1499.2892.1 ID=prot_E-siliculosus-1a_F_contig1499.2892.1|Name=mRNA_E-siliculosus-1a_F_contig1499.2892.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=710bp
MSMAPSASKIAWTFTFAICSRSGDSFHFQSPCSSSRWPGVGKGSHSYPAA
PHNDRCCSRPPAQAAAKITAVLAARHQGGVRDPGDETGDSYGDLPGQTAA
DKAGTTEADAEVAEALRRQVFANEKGFEASSVFNPTRAREEREEEEARAL
AAQWGSTPERAKEIVKKTKEDKDLGFQELQRITEELNMSDEQQRAFMLQA
SMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGS
RVNFDSHGLPVADERDPIMQAARETTKANQRAAEKSGVKGITFPSLPDCP
RCSMPTAEDELSRFEMCSQCKAQEISSKAYAGPQMASKYTYDNGDAPFSS
SWTSPVPPKTNGGASTESGKAAEVLPPKRSEQRSSSSGPRSSDPRRPPPP
AVPIDTRRAGAPPSWAAGDNDNDRGESPTGAAAGPLRKGNGNLRSTAGND
SHRNLGNSSPDTVTPPSVTATGSTVATASSRGDGTPGAFPRAAATAAAPA
ENTAVDTKRSSNAKVGRGSDMFSRAPGPLAARASKGGPVSRDRPRGGGGD
GGASSGEMKGNDRAEVAVRKLSLEVAELRTLLGINRSALARVETMNKSAI
APQPTAEGRGAASNNEEQRRDTAVRKLARDVAELRTQLSTVVDKVSDSAV
TPPSGRGGDSEVVQTMKREMAELRSQLDNARKETALTRSALRRLQGEVDV
LQKKSAGRR*
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