prot_E-siliculosus-1a_F_contig149.2852.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig149.2852.1
Unique Name	prot_E-siliculosus-1a_F_contig149.2852.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	184

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: A0A6H5JFV9_9PHAE (EF1_GNE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFV9_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 3.500e-93
Identity = 165/183 (90.16%), Postives = 165/183 (90.16%), Query Frame = 0

Query:    1 MATACDISFDEMAMALSYISLGGTAAAPASSARGLPSLAPVKQEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            MATACDISFDEMAMALSYISLGGTAAAPASSARGLPSLAPVKQEKK                XXXXXXXXXXX  SRADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL
Sbjct:    1 MATACDISFDEMAMALSYISLGGTAAAPASSARGLPSLAPVKQEKKAAKKPEADDEVDNLFDXXXXXXXXXXXE-SRADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 182

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: A0A6H5KBH2_9PHAE (EF1_GNE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH2_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.130e-57
Identity = 97/108 (89.81%), Postives = 101/108 (93.52%), Query Frame = 0

Query:   76 SRADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            SRA+KMA AK AKDAKKK+DRSQIVFEVKPWDTETDLK LF KIC T+I+GLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIE FED VQSVDMTTMNRL
Sbjct:  125 SRAEKMAEAKAAKDAKKKVDRSQIVFEVKPWDTETDLKGLFAKICKTKIEGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEGFEDEVQSVDMTTMNRL 232

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: D8LM77_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM77_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 8.380e-47
Identity = 91/108 (84.26%), Postives = 95/108 (87.96%), Query Frame = 0

Query:   76 SRADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            SRA++MAAAK AKDA KK+DRSQIVFEVKPW+   DLK LF KI  TEIDGLVWGEAHKLVPVAFGVKKLVLSCVV D KVGVEDITDVIE FED VQSVDMTTMNRL
Sbjct:  742 SRAEQMAAAKSAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRKTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIEKFEDEVQSVDMTTMNRL 849

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: A0A485L9S1_9STRA (Aste57867_18212 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9S1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.200e-36
Identity = 65/102 (63.73%), Postives = 82/102 (80.39%), Query Frame = 0

Query:   82 AAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            AA    K+  K I+RSQ+V EVKPW+ ETDL+EL  +I A EIDGL WGE HKLVPVAFG+KKL++ C++ DDKV ++DITD IEAFEDYVQSVD+ +MN++
Sbjct:   86 AAKANKKEKPKPIERSQVVIEVKPWEAETDLEELAAQIKALEIDGLSWGEGHKLVPVAFGIKKLLVQCIIVDDKVLLDDITDAIEAFEDYVQSVDIASMNKV 187

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: A0A6G0WMX9_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMX9_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.550e-36
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 0

Query:   82 AAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            AA    K+  K I+RSQ+V EVKPW+ ETDL+EL  KI   E+DGL WGE HKLVPVAFG+KKL++ C++ DDKV ++DIT+ IEAFEDYVQSVD+ +MN++
Sbjct:   88 AAKANKKEKPKPIERSQVVIEVKPWEAETDLEELAAKIKEVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKVLMDDITEAIEAFEDYVQSVDIASMNKM 189

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: A0A485LAV1_9STRA (Aste57867_18076 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAV1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.420e-36
Identity = 64/102 (62.75%), Postives = 82/102 (80.39%), Query Frame = 0

Query:   82 AAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            AA    K+  K I+RSQ+V EVKPW+ ETDL+EL  KI A E+DGL WGE HKLVPVAFG+KKL++ C++ DDKV ++DITD IE+FEDYVQSVD+ +MN++
Sbjct:  128 AAKANKKEKPKPIERSQVVIEVKPWEAETDLEELAVKIKALEVDGLTWGEGHKLVPVAFGIKKLLVQCIIIDDKVLMDDITDAIESFEDYVQSVDIASMNKM 229

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: A0A6G0WJF4_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF4_9STRA)

HSP 1 Score: 134 bits (336), Expect = 7.660e-36
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 0

Query:   82 AAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            AA    K+  K I+RSQ+V EVKPW+ ETDL+EL  KI   E+DGL WGE HKLVPVAFG+KKL++ C++ DDKV ++DIT+ IEAFEDYVQSVD+ +MN++
Sbjct:  128 AAKANKKEKPKPIERSQVVIEVKPWEAETDLEELAAKIKQVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKVLMDDITEAIEAFEDYVQSVDIASMNKM 229

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: A0A024TMN2_9STRA (EF1_GNE domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TMN2_9STRA)

HSP 1 Score: 130 bits (328), Expect = 4.320e-35
Identity = 66/107 (61.68%), Postives = 84/107 (78.50%), Query Frame = 0

Query:   77 RADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            RA+   A KK K   K ++RSQ+V EVKPW+ ETDL EL GKI A EI+GL WGE HKLVPVAFG+KKL++ C++ DD V ++DIT+ IEAFEDYVQSVD+ +MN++
Sbjct:   87 RAEAAKAGKKEKA--KPVERSQVVLEVKPWEAETDLVELAGKIKALEINGLNWGEGHKLVPVAFGIKKLLIQCIIVDDLVLLDDITEAIEAFEDYVQSVDVASMNKV 191

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: A0A024TSA9_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSA9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.460e-34
Identity = 66/107 (61.68%), Postives = 84/107 (78.50%), Query Frame = 0

Query:   77 RADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            RA+   A KK K   K ++RSQ+V EVKPW+ ETDL EL GKI A EI+GL WGE HKLVPVAFG+KKL++ C++ DD V ++DIT+ IEAFEDYVQSVD+ +MN++
Sbjct:  132 RAEAAKAGKKEKA--KPVERSQVVLEVKPWEAETDLVELAGKIKALEINGLNWGEGHKLVPVAFGIKKLLIQCIIVDDLVLLDDITEAIEAFEDYVQSVDVASMNKV 236

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Match: A0A8J5I4Y8_9STRA (EF1_GNE domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5I4Y8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.600e-34
Identity = 60/92 (65.22%), Postives = 75/92 (81.52%), Query Frame = 0

Query:   92 KKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 183
            K ++RSQ+V EVKPW+ ETDL+EL  KI A  +DGL WGE HKLVPVAFG+KKL++ CV+ DD V ++DITD IE FEDYVQSVD+ +MN+L
Sbjct:   73 KPVERSQVVIEVKPWEAETDLEELAAKIKALPVDGLTWGEGHKLVPVAFGIKKLLVQCVIIDDLVLLDDITDAIEGFEDYVQSVDVASMNKL 164

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig149.2852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JFV9_9PHAE	3.500e-93	90.16	EF1_GNE domain-containing protein n=3 Tax=Ectocarp...	[more]
A0A6H5KBH2_9PHAE	1.130e-57	89.81	EF1_GNE domain-containing protein n=2 Tax=Ectocarp...	[more]
D8LM77_ECTSI	8.380e-47	84.26	Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ...	[more]
A0A485L9S1_9STRA	1.200e-36	63.73	Aste57867_18212 protein n=1 Tax=Aphanomyces stella...	[more]
A0A6G0WMX9_9STRA	2.550e-36	61.76	EF1_GNE domain-containing protein n=1 Tax=Aphanomy...	[more]
A0A485LAV1_9STRA	5.420e-36	62.75	Aste57867_18076 protein n=1 Tax=Aphanomyces stella...	[more]
A0A6G0WJF4_9STRA	7.660e-36	61.76	EF1_GNE domain-containing protein n=1 Tax=Aphanomy...	[more]
A0A024TMN2_9STRA	4.320e-35	61.68	EF1_GNE domain-containing protein n=4 Tax=Aphanomy...	[more]
A0A024TSA9_9STRA	1.460e-34	61.68	EF1_GNE domain-containing protein n=1 Tax=Aphanomy...	[more]
A0A8J5I4Y8_9STRA	1.600e-34	65.22	EF1_GNE domain-containing protein n=1 Tax=Phytopht...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..93
None	No IPR available	PANTHER	PTHR11595	ELONGATION FACTOR 1-BETA	coord: 37..182
None	No IPR available	PANTHER	PTHR11595:SF21	ELONGATION FACTOR 1-BETA	coord: 37..182
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	SMART	SM00888	EF1_GNE_2	coord: 96..183 e-value: 7.9E-32 score: 121.7
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	PFAM	PF00736	EF1_GNE	coord: 99..183 e-value: 5.9E-31 score: 106.5
IPR014717	Translation elongation factor EF1B/ribosomal protein S6	GENE3D	3.30.70.60		coord: 89..183 e-value: 3.5E-35 score: 121.8
IPR036219	Translation elongation factor eEF-1beta-like superfamily	SUPERFAMILY	54984	eEF-1beta-like	coord: 93..183

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig149	contig	E-siliculosus-1a_F_contig149:28746..32461 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig149.2852.1	mRNA_E-siliculosus-1a_F_contig149.2852.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig149 28746..32530 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig149.2852.1 ID=prot_E-siliculosus-1a_F_contig149.2852.1|Name=mRNA_E-siliculosus-1a_F_contig149.2852.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=184bp
MATACDISFDEMAMALSYISLGGTAAAPASSARGLPSLAPVKQEKKAAKK
PEADDEMDDLFDDDEEDAAPAKKEESRADKMAAAKKAKDAKKKIDRSQIV
FEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCV
VEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036219	eEF-1beta-like_sf
IPR014717	Transl_elong_EF1B/ribosomal_S6
IPR014038	EF1B_bsu/dsu_GNE