prot_E-siliculosus-1a_F_contig149.2850.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig149.2850.1
Unique Nameprot_E-siliculosus-1a_F_contig149.2850.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length120
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: D8LCD1_ECTSI (Ribosomal protein L34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD1_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 2.540e-73
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0
Query:    1 MVRGDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 119
            MVRGDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKG  CADA C+++LPGIKH+RPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA
Sbjct:   19 MVRGDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGVHCADASCSVALPGIKHMRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 137          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: A0A6V2RVW8_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V2RVW8_HETAK)

HSP 1 Score: 166 bits (419), Expect = 7.050e-51
Identity = 85/115 (73.91%), Postives = 94/115 (81.74%), Query Frame = 0
Query:    5 DGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 119
            D R+ YTRRH Y TKSNK K  KTPGG+LVAHY KK A GP C+D  C   L GIKHLRPK+YKNLKKR+KTVSRAYGGS CA CVRQR+VRAFLIEEQKIVKK+++EK KK KA
Sbjct:    4 DIRVQYTRRHCYATKSNKVKITKTPGGRLVAHYHKKKAAGPKCSD--CGTVLAGIKHLRPKQYKNLKKREKTVSRAYGGSACAGCVRQRIVRAFLIEEQKIVKKMIMEKMKKAKA 116          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: A0A835ZPJ0_9STRA (Ribosomal protein L34e-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ0_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.900e-50
Identity = 86/112 (76.79%), Postives = 92/112 (82.14%), Query Frame = 0
Query:    4 GDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQK 115
            GD R+TYTRRHAY T SNK K V+TPGGK VAHY KK A GP C D  C I+LPGI  LRPKEYKNLK+R+KTVSRAYGGS CA CVRQRVVRAFLIEEQKIVKK+L EK K
Sbjct:    3 GDKRVTYTRRHAYATASNKIKVVRTPGGKHVAHYRKKKANGPKCGD--CKIALPGIACLRPKEYKNLKRREKTVSRAYGGSRCAACVRQRVVRAFLIEEQKIVKKLLAEKIK 112          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: A0A7S2UXI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXI2_9STRA)

HSP 1 Score: 158 bits (400), Expect = 5.520e-48
Identity = 81/114 (71.05%), Postives = 94/114 (82.46%), Query Frame = 0
Query:    5 DGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKK 118
            D R+ Y RRH+Y TKSNK K VKTPGG+LVAHY  K AKGP CA+  C ISLPGIKH+RP +YKN+KKR+KTV+RAYGGS C  CV+ R+VRAFLIEEQKIVKK++ EK KKKK
Sbjct:    4 DIRVQYRRRHSYATKSNKIKIVKTPGGRLVAHYHTKKAKGPKCAE--CGISLPGIKHVRPIKYKNMKKREKTVTRAYGGSECGKCVKDRIVRAFLIEEQKIVKKMVAEKLKKKK 115          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: K3WQZ0_GLOUD (Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WQZ0_GLOUD)

HSP 1 Score: 157 bits (396), Expect = 2.110e-47
Identity = 84/113 (74.34%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    7 RITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 119
            R+TY RRH+Y TKSN  KAVKTPGG LVA Y KK   GP C D  C  SL GIKHL PKEYKN+ K Q+TVSRAYGGS CA CVRQR+VRAFLIEEQKIVKKVLLEK KKK A
Sbjct:    6 RVTYRRRHSYATKSNGIKAVKTPGGVLVAQYRKKRCAGPKCGD--CKQSLKGIKHLSPKEYKNVSKTQRTVSRAYGGSRCANCVRQRIVRAFLIEEQKIVKKVLLEKMKKKSA 116          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: M4B9E9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B9E9_HYAAE)

HSP 1 Score: 155 bits (392), Expect = 3.580e-46
Identity = 83/113 (73.45%), Postives = 90/113 (79.65%), Query Frame = 0
Query:    7 RITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 119
            RITY RRH+Y TKSN  K VKTPGGKLVA Y +K A GP C D  C  SL GIKHL+PKEYKN+ K  +TVSRAYGGS CA CVRQR+VRAFLIEEQKIVKKVLLEK KK K+
Sbjct:   51 RITYRRRHSYATKSNAIKPVKTPGGKLVAQYREKRAAGPKCGD--CKQSLKGIKHLKPKEYKNVSKTHRTVSRAYGGSRCALCVRQRIVRAFLIEEQKIVKKVLLEKLKKNKS 161          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: A0A485KJ51_9STRA (Aste57867_7967 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KJ51_9STRA)

HSP 1 Score: 153 bits (387), Expect = 5.610e-46
Identity = 82/113 (72.57%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    7 RITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 119
            RITY RRH+Y TKSN+   VKTPGGKLVAHY KK++ GP C D  C  SL GIKHL  K YKN+ K +KTVSRAYGGS CA CVRQR+VRAFLIEEQKIVKKVLLEK  KKK 
Sbjct:    6 RITYRRRHSYATKSNRIVPVKTPGGKLVAHYRKKTSHGPKCGD--CKQSLKGIKHLATKAYKNIAKSEKTVSRAYGGSRCAGCVRQRIVRAFLIEEQKIVKKVLLEKLSKKKT 116          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: K8YVG6_NANGC (Large subunit ribosomal protein L34e n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVG6_NANGC)

HSP 1 Score: 151 bits (382), Expect = 2.690e-45
Identity = 77/113 (68.14%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    5 DGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKK 117
            D R+TY RRHAY T+SN    VKTPGG+L  H +KK  +GP C D  C I+LPGIKHL+ KEYKNL KR++TVSRAYGGS CA CVR R+VRAFLIEEQKIVK+VL EK+ KK
Sbjct:    4 DTRVTYQRRHAYATRSNGRVIVKTPGGRLTLHQIKKKTRGPHCGD--CKIALPGIKHLKTKEYKNLHKRERTVSRAYGGSRCASCVRSRIVRAFLIEEQKIVKRVLNEKKSKK 114          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: F0W7S6_9STRA (Ribosomal protein L34 putative n=2 Tax=Albugo TaxID=65356 RepID=F0W7S6_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.770e-45
Identity = 81/117 (69.23%), Postives = 90/117 (76.92%), Query Frame = 0
Query:    1 MVRGDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKK 117
            MVR + R+ + RRH+Y TKSNK K VKTPGG+L AHY KK A GP C D  C  SL GI HLRPK YK L K Q+TVSRAYGGS CA CVR R+VRAFL+EEQKIVKKVLLEK K+K
Sbjct:    1 MVR-ERRVQFRRRHSYATKSNKIKVVKTPGGQLTAHYRKKRAAGPKCGD--CKQSLKGIAHLRPKVYKTLSKTQRTVSRAYGGSRCAKCVRNRIVRAFLVEEQKIVKKVLLEKMKRK 114          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Match: A0A7S2TCS5_PROMC (Hypothetical protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TCS5_PROMC)

HSP 1 Score: 151 bits (381), Expect = 4.060e-45
Identity = 76/112 (67.86%), Postives = 91/112 (81.25%), Query Frame = 0
Query:    7 RITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADAGCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKK 118
            RITY RRH+Y TKSNK +AVKTPGG+L A Y+KK A GP C D  C + LPGI  LRPK+YKNL KR+K+VSRAYGG+ CA CVR+R+VRAFLIEEQK+VK++L +K KK K
Sbjct:    6 RITYKRRHSYATKSNKIRAVKTPGGRLTAQYIKKKAAGPKCGD--CAVRLPGIPALRPKQYKNLHKREKSVSRAYGGNRCAGCVRERIVRAFLIEEQKVVKRLLAQKAKKSK 115          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig149.2850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCD1_ECTSI2.540e-7394.12Ribosomal protein L34 n=1 Tax=Ectocarpus siliculos... [more]
A0A6V2RVW8_HETAK7.050e-5173.91Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A835ZPJ0_9STRA1.900e-5076.79Ribosomal protein L34e-domain-containing protein n... [more]
A0A7S2UXI2_9STRA5.520e-4871.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3WQZ0_GLOUD2.110e-4774.34Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4... [more]
M4B9E9_HYAAE3.580e-4673.45Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A485KJ51_9STRA5.610e-4672.57Aste57867_7967 protein n=8 Tax=Saprolegniaceae Tax... [more]
K8YVG6_NANGC2.690e-4568.14Large subunit ribosomal protein L34e n=3 Tax=Monod... [more]
F0W7S6_9STRA2.770e-4569.23Ribosomal protein L34 putative n=2 Tax=Albugo TaxI... [more]
A0A7S2TCS5_PROMC4.060e-4567.86Hypothetical protein n=1 Tax=Prorocentrum micans T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 16..29
score: 53.06
coord: 29..46
score: 45.24
coord: 69..91
score: 45.96
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 7..99
e-value: 1.8E-38
score: 130.7
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 7..118
IPR038562Ribosomal protein L34Ae superfamilyGENE3D3.40.1800.40coord: 42..119
e-value: 3.6E-34
score: 118.4
NoneNo IPR availablePANTHERPTHR10759:SF0FI02850P-RELATEDcoord: 7..118
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 18..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig149contigE-siliculosus-1a_F_contig149:18453..20394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig149.2850.1mRNA_E-siliculosus-1a_F_contig149.2850.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig149 18453..21035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig149.2850.1 ID=prot_E-siliculosus-1a_F_contig149.2850.1|Name=mRNA_E-siliculosus-1a_F_contig149.2850.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=120bp
MVRGDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGPICADA
GCNISLPGIKHLRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLI
EEQKIVKKVLLEKQKKKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018065Ribosomal_L34e_CS
IPR038562Ribosomal_L34Ae_sf
IPR008195Ribosomal_L34Ae