prot_E-siliculosus-1a_F_contig1476.2777.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1476.2777.1
Unique Nameprot_E-siliculosus-1a_F_contig1476.2777.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length790
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1476.2777.1 vs. uniprot
Match: A0A6H5JJD6_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJD6_9PHAE)

HSP 1 Score: 895 bits (2314), Expect = 0.000e+0
Identity = 629/794 (79.22%), Postives = 649/794 (81.74%), Query Frame = 0 
Query:    1 MALKLNSDAVRHAVKDGDVDAVREYLESGVEANLANPNTGRTLLHIACRQGYPAIASLLLSNGANPGATTLRQLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVSDQRDNITALHLACCWGQLXXXXXXXXXXXXSSAKDCNGSFPDHVIGAGSPDSVDPACAHELSEVVVGHRRRIKGASSSLECVVDSLRSKVSHLEDQLERAERERLEVMAYSSDESRATFSAAVKPECPVCQVEVKEAVLDPCRHLAACASCANSLQSCPLCSCPVRGYRLLESRHVYERVSALEDESAGMRAQLKRFSRRVRDLVAENADLKLDVRRTRAEILVVTAERRGLEERFLLRTPSPAPTPPGVESGSIAAGSSVASFEGGGTEKPRGRFTLTSENSTGTSGGCDDGIHRMQGPGVVFSGGGPSAPSLDEPELTVLDRPRPADSSYLSGRTASGEGKGQTGSSSKSSCSELIAEGANSSGDDDPSKNTI-VESGARVDASEGGDGQGAERCVFSDRTVGDGDTTPTPGEVTCGTDDHKYERQEELHACTLGTPAELKDGTGDGGKSNTALGTVQAASGSAADDPLDLEAARLNETTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDCAAFSRSVRPTRACSVSVKIVGGACIDCSDTTAETTHPVNLPGALLLAGDVDEDETNSRSSP----NSRNQVVERDTNSASDDGDWSISTSICGDKSGVWPSSSFILAQSQR 789
            MALKLNSDAVRHAVKDGDVDAVREYLESGV+ANLANPNTGRTLLHIACRQGYPA+ASLLLSNGANPGATTLRQLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ARV+       A                      SSAKDCNGSFPDHVIGAG+PD VDPACAHELSEVVVGHRRRIK                                               +AVKPECPVCQVEVKEAVLDPCRHLA CASCANSLQSCPLCSCPVRGYRLLESR VYER+SALEDESAGMRAQ  RFSRRVRDLVAENADLKLDV+RTRAE+ VVTAERRGLEERFLLRTPSP PTPP VESGSIAAGSSVASFEGGG EKPRGRFTLTSENSTGTSG CDDGIHRMQ PGVVFSGGG SAPSLDEPEL VLDRPRP+D SYLSGR ASGEGKGQ GSSSKSSCSELIAEGANSS D DPSK T  VE+G RVDASEGGDGQ A RC F DRTVGDGD  PTP + TCG DD K ERQEELHACTLGT AELKDG G G +S TAL TVQAA GSAADDP  LE A L+E T      XXXXXXXXXXXXXXXXXXXXXX +SD  AFS+SVRPTRACSVSVKIVGGAC+DCS +TAETTHP NLPGAL LAG   E++TNS  SP    NS NQVVERDTNSASDDGDWSISTSICGD SG+WPSSSFILAQSQR
Sbjct:    1 MALKLNSDAVRHAVKDGDVDAVREYLESGVDANLANPNTGRTLLHIACRQGYPAMASLLLSNGANPGATTLRQLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDARVAKVLLEYGA---------------------DSSAKDCNGSFPDHVIGAGAPDYVDPACAHELSEVVVGHRRRIK-----------------------------------------------SAVKPECPVCQVEVKEAVLDPCRHLATCASCANSLQSCPLCSCPVRGYRLLESRQVYERISALEDESAGMRAQSLRFSRRVRDLVAENADLKLDVQRTRAELSVVTAERRGLEERFLLRTPSPEPTPPVVESGSIAAGSSVASFEGGGAEKPRGRFTLTSENSTGTSGACDDGIHRMQRPGVVFSGGGFSAPSLDEPELAVLDRPRPSDGSYLSGRPASGEGKGQAGSSSKSSCSELIAEGANSSSDGDPSKTTTTVETGVRVDASEGGDGQDAGRCFFPDRTVGDGDAAPTPVKATCGMDDQKCERQEELHACTLGTLAELKDGAGGGSESATALATVQAARGSAADDPPGLEDACLDEPTADSHLDXXXXXXXXXXXXXXXXXXXXXXEDSDRVAFSQSVRPTRACSVSVKIVGGACMDCSGSTAETTHPANLPGALFLAGRDGEEDTNSTRSPMDVSNSGNQVVERDTNSASDDGDWSISTSICGDTSGLWPSSSFILAQSQR 726
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BLAST of mRNA_E-siliculosus-1a_F_contig1476.2777.1 vs. uniprot
Match: A0A026WK62_OOCBI (Ankyrin repeat domain-containing protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WK62_OOCBI)

HSP 1 Score: 60.8 bits (146), Expect = 1.910e-6
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0 
Query:    8 DAVRHAVKDGDVDAVREYLESGVEANLANPNTGRTLLHIACRQGYPAIASLLLSNGAN 65
            + +R AV  GDVDAV+E++  GV+ N   P +G T LH AC++G+  +A+LLL NGA+
Sbjct:    7 ERLREAVCVGDVDAVQEFINLGVDVNARQPVSGWTALHWACKKGHLLVAALLLKNGAD 64
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BLAST of mRNA_E-siliculosus-1a_F_contig1476.2777.1 vs. uniprot
Match: A0A154PRV4_DUFNO (Ankyrin repeat domain-containing protein 40 n=2 Tax=Dufourea novaeangliae TaxID=178035 RepID=A0A154PRV4_DUFNO)

HSP 1 Score: 60.5 bits (145), Expect = 2.660e-6
Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0 
Query:    8 DAVRHAVKDGDVDAVREYLESGVEANLANPNTGRTLLHIACRQGYPAIASLLLSNGANPGATTLRQLTP 76
            + ++ AV  GD++AV++ L  GV+ N  N + G T LH AC++GY  IA+LLL NGA+    + + LTP
Sbjct:   19 ERLKEAVCFGDIEAVQQLLNIGVDVNAQNFHNGWTPLHWACKKGYLNIAALLLKNGADKNIKSEKGLTP 87
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1476.2777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JJD6_9PHAE0.000e+079.22RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A026WK62_OOCBI1.910e-648.28Ankyrin repeat domain-containing protein n=1 Tax=O... [more]
A0A154PRV4_DUFNO2.660e-643.48Ankyrin repeat domain-containing protein 40 n=2 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 251..278
NoneNo IPR availableCOILSCoilCoilcoord: 348..389
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 293..334
e-value: 1.1E-8
score: 34.8
NoneNo IPR availablePANTHERPTHR24184FAMILY NOT NAMEDcoord: 75..208
NoneNo IPR availablePANTHERPTHR24184FAMILY NOT NAMEDcoord: 11..142
NoneNo IPR availablePANTHERPTHR24184:SF11coord: 75..208
coord: 11..142
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 294..334
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 106..121
score: 39.95
coord: 188..202
score: 38.83
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 138..167
e-value: 0.0031
score: 26.7
coord: 5..34
e-value: 3100.0
score: 1.3
coord: 39..68
e-value: 5.5E-4
score: 29.3
coord: 172..201
e-value: 2.3E-5
score: 33.8
coord: 72..101
e-value: 0.51
score: 19.4
coord: 105..134
e-value: 1.3E-5
score: 34.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 72..104
score: 11.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 172..204
score: 12.529
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 105..137
score: 15.441
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 138..170
score: 11.995
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 39..71
score: 11.033
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 295..329
e-value: 0.0084
score: 25.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 295..330
score: 10.542
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..72
e-value: 6.4E-13
score: 50.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 73..222
e-value: 2.7E-48
score: 166.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 10..212
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 72..134
e-value: 3.2E-13
score: 50.1
coord: 138..203
e-value: 2.4E-11
score: 44.1
coord: 8..69
e-value: 1.4E-7
score: 32.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 5..212
score: 61.544
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 274..338
e-value: 7.0E-11
score: 43.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1476contigE-siliculosus-1a_F_contig1476:7555..12530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1476.2777.1mRNA_E-siliculosus-1a_F_contig1476.2777.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1476 7555..12530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1476.2777.1 ID=prot_E-siliculosus-1a_F_contig1476.2777.1|Name=mRNA_E-siliculosus-1a_F_contig1476.2777.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=790bp
MALKLNSDAVRHAVKDGDVDAVREYLESGVEANLANPNTGRTLLHIACRQ
GYPAIASLLLSNGANPGATTLRQLTPLHLACHQGHLKVARLVLEAWAPVD
DRDETGATPLHLSAQQGHTDVVRLLLQCGADKDALDQSGWTPVFFASWNG
HAEVARMLLQAGANARVSDQRDNITALHLACCWGQLEVAKVLLEYGADSS
AKDCNGSFPDHVIGAGSPDSVDPACAHELSEVVVGHRRRIKGASSSLECV
VDSLRSKVSHLEDQLERAERERLEVMAYSSDESRATFSAAVKPECPVCQV
EVKEAVLDPCRHLAACASCANSLQSCPLCSCPVRGYRLLESRHVYERVSA
LEDESAGMRAQLKRFSRRVRDLVAENADLKLDVRRTRAEILVVTAERRGL
EERFLLRTPSPAPTPPGVESGSIAAGSSVASFEGGGTEKPRGRFTLTSEN
STGTSGGCDDGIHRMQGPGVVFSGGGPSAPSLDEPELTVLDRPRPADSSY
LSGRTASGEGKGQTGSSSKSSCSELIAEGANSSGDDDPSKNTIVESGARV
DASEGGDGQGAERCVFSDRTVGDGDTTPTPGEVTCGTDDHKYERQEELHA
CTLGTPAELKDGTGDGGKSNTALGTVQAASGSAADDPLDLEAARLNETTA
DSHLDLETVLVNESIADNRLDHETVRLKESDCAAFSRSVRPTRACSVSVK
IVGGACIDCSDTTAETTHPVNLPGALLLAGDVDEDETNSRSSPNSRNQVV
ERDTNSASDDGDWSISTSICGDKSGVWPSSSFILAQSQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR001841Znf_RING
IPR002110Ankyrin_rpt